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PDB: 71 results

2Z9H
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BU of 2z9h by Molmil
Ethanolamine utilization protein, EutN
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, CHLORIDE ION, Ethanolamine utilization protein eutN
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2007-09-20
Release date:2007-10-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:The crystal structure of ethanolamine utilization protein EutN from E. coli
To be Published
2ZQ5
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BU of 2zq5 by Molmil
Crystal structure of sulfotransferase STF1 from Mycobacterium tuberculosis H37Rv (type1 form)
Descriptor: Putative uncharacterized protein
Authors:Tanaka, S, Kimura, M, Kakuta, Y.
Deposit date:2008-08-06
Release date:2009-09-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of sulfotransferase STF1 from Mycobacterium tuberculosis H37Rv
To be Published
3CIM
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BU of 3cim by Molmil
Carboxysome shell protein, CcmK2 C-terminal deletion mutant
Descriptor: Carbon dioxide-concentrating mechanism protein ccmK homolog 2, GLYCEROL, SULFATE ION
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2008-03-11
Release date:2009-02-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Insights from multiple structures of the shell proteins from the beta-carboxysome.
Protein Sci., 18, 2009
6KYI
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BU of 6kyi by Molmil
Rice Rubisco in complex with sulfate ions
Descriptor: GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ...
Authors:Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H.
Deposit date:2019-09-19
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity.
Mol Plant, 13, 2020
8IBN
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BU of 8ibn by Molmil
Cryo-EM structure of KpFtsZ single filament
Descriptor: Cell division protein FtsZ, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, POTASSIUM ION
Authors:Fujita, J, Amesaka, H, Yoshizawa, T, Kuroda, N, Kamimura, N, Hibino, K, Konishi, T, Kato, Y, Hara, M, Inoue, T, Namba, K, Tanaka, S, Matsumura, H.
Deposit date:2023-02-10
Release date:2023-08-02
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
7DBT
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BU of 7dbt by Molmil
Crystal structure of catalytic domain of Anhydrobiosis-related Mn-dependent Peroxidase (AMNP) from Ramazzottius varieornatus (Mn2+-bound form)
Descriptor: AMNP/g12777, MANGANESE (II) ION
Authors:Yoshida, Y, Satoh, T, Ota, C, Tanaka, S, Horikawa, D.D, Tomita, M, Kato, K, Arakawa, K.
Deposit date:2020-10-21
Release date:2021-10-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Time-series transcriptomic screening of factors contributing to the cross-tolerance to UV radiation and anhydrobiosis in tardigrades.
Bmc Genomics, 23, 2022
7DBU
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BU of 7dbu by Molmil
Crystal structure of catalytic domain of Anhydrobiosis-related Mn-dependent Peroxidase (AMNP) from Ramazzottius varieornatus (Zn2+-bound form)
Descriptor: AMNP/g12777, ZINC ION
Authors:Yoshida, Y, Satoh, T, Ota, C, Tanaka, S, Horikawa, D.D, Tomita, M, Kato, K, Arakawa, K.
Deposit date:2020-10-21
Release date:2021-10-06
Last modified:2022-06-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Time-series transcriptomic screening of factors contributing to the cross-tolerance to UV radiation and anhydrobiosis in tardigrades.
Bmc Genomics, 23, 2022
3VHQ
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BU of 3vhq by Molmil
Crystal structure of the Ca6 site mutant of Pro-SA-subtilisin
Descriptor: CALCIUM ION, Tk-subtilisin
Authors:Uehara, R, Takeuchi, Y, Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2011-09-01
Release date:2012-07-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Requirement of Ca(2+) Ions for the Hyperthermostability of Tk-Subtilisin from Thermococcus kodakarensis
Biochemistry, 51, 2012
3VND
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BU of 3vnd by Molmil
Crystal structure of tryptophan synthase alpha-subunit from the psychrophile Shewanella frigidimarina K14-2
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, SULFATE ION, Tryptophan synthase alpha chain
Authors:Mitsuya, D, Tanaka, S, Matsumura, H, Takano, K, Urano, N, Ishida, M.
Deposit date:2012-01-12
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Strategy for cold adaptation of the tryptophan synthase alpha subunit from the psychrophile Shewanella frigidimarina K14-2: crystal structure and physicochemical properties
J.Biochem., 155, 2014
6LL5
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BU of 6ll5 by Molmil
Crystal structure of KpFtsZ (residues 11-316)
Descriptor: Cell division protein FtsZ, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE
Authors:Yoshizawa, T, Fujita, J, Terakado, H, Ozawa, M, Kuroda, N, Tanaka, S, Uehara, R, Matsumura, H.
Deposit date:2019-12-21
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of the cell-division protein FtsZ from Klebsiella pneumoniae and Escherichia coli.
Acta Crystallogr.,Sect.F, 76, 2020
6LL6
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BU of 6ll6 by Molmil
Crsyal structure of EcFtsZ (residues 11-316)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Yoshizawa, T, Fujita, J, Terakada, H, Ozawa, M, Kuroda, N, Tanaka, S, Uehara, R, Matsumura, H.
Deposit date:2019-12-21
Release date:2020-02-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of the cell-division protein FtsZ from Klebsiella pneumoniae and Escherichia coli.
Acta Crystallogr.,Sect.F, 76, 2020
8H1O
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BU of 8h1o by Molmil
Cryo-EM structure of KpFtsZ-monobody double helical tube
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Mb(Ec/KpFtsZ_S1)
Authors:Fujita, J, Amesaka, H, Yoshizawa, T, Kuroda, N, Kamimura, N, Hara, M, Inoue, T, Namba, K, Tanaka, S, Matsumura, H.
Deposit date:2022-10-03
Release date:2023-08-02
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
1BNA
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BU of 1bna by Molmil
STRUCTURE OF A B-DNA DODECAMER. CONFORMATION AND DYNAMICS
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Drew, H.R, Wing, R.M, Takano, T, Broka, C, Tanaka, S, Itakura, K, Dickerson, R.E.
Deposit date:1981-01-26
Release date:1981-05-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a B-DNA dodecamer: conformation and dynamics.
Proc.Natl.Acad.Sci.USA, 78, 1981
8GZV
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BU of 8gzv by Molmil
Klebsiella pneumoniae FtsZ complexed with monobody (P212121)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
Authors:Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
Deposit date:2022-09-27
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
8GZX
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BU of 8gzx by Molmil
Escherichia coli FtsZ complexed with monobody (P212121)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
Authors:Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
Deposit date:2022-09-27
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
8GZW
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BU of 8gzw by Molmil
Klebsiella pneumoniae FtsZ complexed with monobody (P21)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
Authors:Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
Deposit date:2022-09-27
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
8GZY
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BU of 8gzy by Molmil
Escherichia coli FtsZ complexed with monobody (P21)
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody
Authors:Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H.
Deposit date:2022-09-27
Release date:2023-07-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody.
Nat Commun, 14, 2023
7BUX
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BU of 7bux by Molmil
Eucommia ulmoides FPS1
Descriptor: FPS2
Authors:Kajiura, H, Yoshizawa, T, Tokumoto, Y, Suzuki, N, Takeno, S, Takeno, K.J, Yamashita, T, Tanaka, S, Kaneko, Y, Fujiyama, K, Matsumura, H, Nakazawa, Y.
Deposit date:2020-04-08
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-function studies of ultrahigh molecular weight isoprenes provide key insights into their biosynthesis.
Commun Biol, 4, 2021
7BUW
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BU of 7buw by Molmil
Eucommia ulmoides TPT3 mutant -C94Y/A95F
Descriptor: FPS3
Authors:Kajiura, H, Yoshizawa, T, Tokumoto, Y, Suzuki, N, Takeno, S, Takeno, K.J, Yamashita, T, Tanaka, S, Kaneko, Y, Fujiyama, K, Matsumura, H, Nakazawa, Y.
Deposit date:2020-04-08
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure-function studies of ultrahigh molecular weight isoprenes provide key insights into their biosynthesis.
Commun Biol, 4, 2021
7BUV
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BU of 7buv by Molmil
Eucommia ulmoides TPT3, crystal form 2
Descriptor: FPS3
Authors:Kajiura, H, Yoshizawa, T, Tokumoto, Y, Suzuki, N, Takeno, S, Takeno, K.J, Yamashita, T, Tanaka, S, Kaneko, Y, Fujiyama, K, Matsumura, H, Nakazawa, Y.
Deposit date:2020-04-08
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure-function studies of ultrahigh molecular weight isoprenes provide key insights into their biosynthesis.
Commun Biol, 4, 2021
7BUU
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BU of 7buu by Molmil
Eucommia ulmoides TPT3, crystal form 1
Descriptor: FPS3
Authors:Kajiura, H, Yoshizawa, T, Tokumoto, Y, Suzuki, N, Takeno, S, Takeno, K.J, Yamashita, T, Tanaka, S, Kaneko, Y, Fujiyama, K, Matsumura, H, Nakazawa, Y.
Deposit date:2020-04-08
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-function studies of ultrahigh molecular weight isoprenes provide key insights into their biosynthesis.
Commun Biol, 4, 2021
6KYJ
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BU of 6kyj by Molmil
Hybrid-Rubisco (rice RbcL and sorghum RbcS) in complex with sulfate ions
Descriptor: GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ...
Authors:Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H.
Deposit date:2019-09-19
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity.
Mol Plant, 13, 2020
1Y67
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BU of 1y67 by Molmil
Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans
Descriptor: FE (III) ION, Manganese Superoxide dismutase
Authors:Chan, S, Tanaka, S, Sawaya, M.R, Perry, L.J.
Deposit date:2004-12-03
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Crystal Structure of Manganese Superoxide Dismutase from Deinococcus radiodurans
To be Published
3WN6
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BU of 3wn6 by Molmil
Crystal structure of alpha-amylase AmyI-1 from Oryza sativa
Descriptor: Alpha-amylase, CALCIUM ION, D(-)-TARTARIC ACID, ...
Authors:Ochiai, A, Sugai, H, Harada, K, Tanaka, S, Ishiyama, Y, Ito, K, Tanaka, T, Uchiumi, T, Taniguchi, M, Mitsui, T.
Deposit date:2013-12-05
Release date:2014-09-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of alpha-amylase from Oryza sativa: molecular insights into enzyme activity and thermostability
Biosci.Biotechnol.Biochem., 78, 2014
2A10
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BU of 2a10 by Molmil
carboxysome shell protein ccmK4
Descriptor: Carbon dioxide concentrating mechanism protein ccmK homolog 4
Authors:Kerfeld, C.A, Sawaya, M.R, Tanaka, S, Nguyen, C.V, Phillips, M, Beeby, M, Yeates, T.O.
Deposit date:2005-06-17
Release date:2005-08-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Protein structures forming the shell of primitive bacterial organelles
Science, 309, 2005

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數據於2024-07-17公開中

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