3A3O
| Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the five C-terminal residues | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-06-15 | 公開日 | 2009-08-18 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
|
|
3BN4
| Carboxysome Subunit, CcmK1 | 分子名称: | Carbon dioxide-concentrating mechanism protein ccmK homolog 1, SULFATE ION | 著者 | Tanaka, S, Sawaya, M.R, Yeates, T.O. | 登録日 | 2007-12-13 | 公開日 | 2008-03-04 | 最終更新日 | 2024-02-21 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Atomic-level models of the bacterial carboxysome shell. Science, 319, 2008
|
|
2Z9H
| |
2ZQ5
| |
7BUX
| Eucommia ulmoides FPS1 | 分子名称: | FPS2 | 著者 | Kajiura, H, Yoshizawa, T, Tokumoto, Y, Suzuki, N, Takeno, S, Takeno, K.J, Yamashita, T, Tanaka, S, Kaneko, Y, Fujiyama, K, Matsumura, H, Nakazawa, Y. | 登録日 | 2020-04-08 | 公開日 | 2021-02-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structure-function studies of ultrahigh molecular weight isoprenes provide key insights into their biosynthesis. Commun Biol, 4, 2021
|
|
7BUW
| Eucommia ulmoides TPT3 mutant -C94Y/A95F | 分子名称: | FPS3 | 著者 | Kajiura, H, Yoshizawa, T, Tokumoto, Y, Suzuki, N, Takeno, S, Takeno, K.J, Yamashita, T, Tanaka, S, Kaneko, Y, Fujiyama, K, Matsumura, H, Nakazawa, Y. | 登録日 | 2020-04-08 | 公開日 | 2021-02-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | Structure-function studies of ultrahigh molecular weight isoprenes provide key insights into their biosynthesis. Commun Biol, 4, 2021
|
|
7BUV
| Eucommia ulmoides TPT3, crystal form 2 | 分子名称: | FPS3 | 著者 | Kajiura, H, Yoshizawa, T, Tokumoto, Y, Suzuki, N, Takeno, S, Takeno, K.J, Yamashita, T, Tanaka, S, Kaneko, Y, Fujiyama, K, Matsumura, H, Nakazawa, Y. | 登録日 | 2020-04-08 | 公開日 | 2021-02-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | Structure-function studies of ultrahigh molecular weight isoprenes provide key insights into their biosynthesis. Commun Biol, 4, 2021
|
|
7BUU
| Eucommia ulmoides TPT3, crystal form 1 | 分子名称: | FPS3 | 著者 | Kajiura, H, Yoshizawa, T, Tokumoto, Y, Suzuki, N, Takeno, S, Takeno, K.J, Yamashita, T, Tanaka, S, Kaneko, Y, Fujiyama, K, Matsumura, H, Nakazawa, Y. | 登録日 | 2020-04-08 | 公開日 | 2021-02-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structure-function studies of ultrahigh molecular weight isoprenes provide key insights into their biosynthesis. Commun Biol, 4, 2021
|
|
1BNA
| STRUCTURE OF A B-DNA DODECAMER. CONFORMATION AND DYNAMICS | 分子名称: | DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') | 著者 | Drew, H.R, Wing, R.M, Takano, T, Broka, C, Tanaka, S, Itakura, K, Dickerson, R.E. | 登録日 | 1981-01-26 | 公開日 | 1981-05-21 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structure of a B-DNA dodecamer: conformation and dynamics. Proc.Natl.Acad.Sci.USA, 78, 1981
|
|
6KYJ
| Hybrid-Rubisco (rice RbcL and sorghum RbcS) in complex with sulfate ions | 分子名称: | GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ... | 著者 | Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H. | 登録日 | 2019-09-19 | 公開日 | 2020-09-16 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity. Mol Plant, 13, 2020
|
|
6KYI
| Rice Rubisco in complex with sulfate ions | 分子名称: | GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ... | 著者 | Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H. | 登録日 | 2019-09-19 | 公開日 | 2020-09-16 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity. Mol Plant, 13, 2020
|
|
6M4E
| Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis | 分子名称: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Uehara, R, Iwamoto, R, Aoki, S, Yoshizawa, T, Takano, K, Matsumura, H, Tanaka, S.-i. | 登録日 | 2020-03-06 | 公開日 | 2020-09-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis. Protein Sci., 29, 2020
|
|
6M4F
| Crystal structure of the E496A mutant of HsBglA | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-galactosidase-like enzyme, ... | 著者 | Uehara, R, Iwamoto, R, Aoki, S, Yoshizawa, T, Takano, K, Matsumura, H, Tanaka, S.-i. | 登録日 | 2020-03-06 | 公開日 | 2020-09-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis. Protein Sci., 29, 2020
|
|
6M55
| Crystal structure of the E496A mutant of HsBglA in complex with 4-galactosyllactose | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-galactosidase-like enzyme, ... | 著者 | Uehara, R, Iwamoto, R, Aoki, S, Yoshizawa, T, Takano, K, Matsumura, H, Tanaka, S.-i. | 登録日 | 2020-03-10 | 公開日 | 2020-09-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Crystal structure of a GH1 beta-glucosidase from Hamamotoa singularis. Protein Sci., 29, 2020
|
|
6LL6
| Crsyal structure of EcFtsZ (residues 11-316) | 分子名称: | Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE | 著者 | Yoshizawa, T, Fujita, J, Terakada, H, Ozawa, M, Kuroda, N, Tanaka, S, Uehara, R, Matsumura, H. | 登録日 | 2019-12-21 | 公開日 | 2020-02-26 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structures of the cell-division protein FtsZ from Klebsiella pneumoniae and Escherichia coli. Acta Crystallogr.,Sect.F, 76, 2020
|
|
6LL5
| Crystal structure of KpFtsZ (residues 11-316) | 分子名称: | Cell division protein FtsZ, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE | 著者 | Yoshizawa, T, Fujita, J, Terakado, H, Ozawa, M, Kuroda, N, Tanaka, S, Uehara, R, Matsumura, H. | 登録日 | 2019-12-21 | 公開日 | 2020-02-26 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Crystal structures of the cell-division protein FtsZ from Klebsiella pneumoniae and Escherichia coli. Acta Crystallogr.,Sect.F, 76, 2020
|
|
2EYY
| |
7DBT
| Crystal structure of catalytic domain of Anhydrobiosis-related Mn-dependent Peroxidase (AMNP) from Ramazzottius varieornatus (Mn2+-bound form) | 分子名称: | AMNP/g12777, MANGANESE (II) ION | 著者 | Yoshida, Y, Satoh, T, Ota, C, Tanaka, S, Horikawa, D.D, Tomita, M, Kato, K, Arakawa, K. | 登録日 | 2020-10-21 | 公開日 | 2021-10-06 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Time-series transcriptomic screening of factors contributing to the cross-tolerance to UV radiation and anhydrobiosis in tardigrades. Bmc Genomics, 23, 2022
|
|
7DBU
| Crystal structure of catalytic domain of Anhydrobiosis-related Mn-dependent Peroxidase (AMNP) from Ramazzottius varieornatus (Zn2+-bound form) | 分子名称: | AMNP/g12777, ZINC ION | 著者 | Yoshida, Y, Satoh, T, Ota, C, Tanaka, S, Horikawa, D.D, Tomita, M, Kato, K, Arakawa, K. | 登録日 | 2020-10-21 | 公開日 | 2021-10-06 | 最終更新日 | 2022-06-15 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Time-series transcriptomic screening of factors contributing to the cross-tolerance to UV radiation and anhydrobiosis in tardigrades. Bmc Genomics, 23, 2022
|
|
8H1O
| Cryo-EM structure of KpFtsZ-monobody double helical tube | 分子名称: | Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Mb(Ec/KpFtsZ_S1) | 著者 | Fujita, J, Amesaka, H, Yoshizawa, T, Kuroda, N, Kamimura, N, Hara, M, Inoue, T, Namba, K, Tanaka, S, Matsumura, H. | 登録日 | 2022-10-03 | 公開日 | 2023-08-02 | 最終更新日 | 2024-07-03 | 実験手法 | ELECTRON MICROSCOPY (2.67 Å) | 主引用文献 | Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody. Nat Commun, 14, 2023
|
|
8IBN
| Cryo-EM structure of KpFtsZ single filament | 分子名称: | Cell division protein FtsZ, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, POTASSIUM ION | 著者 | Fujita, J, Amesaka, H, Yoshizawa, T, Kuroda, N, Kamimura, N, Hibino, K, Konishi, T, Kato, Y, Hara, M, Inoue, T, Namba, K, Tanaka, S, Matsumura, H. | 登録日 | 2023-02-10 | 公開日 | 2023-08-02 | 最終更新日 | 2024-05-08 | 実験手法 | ELECTRON MICROSCOPY (3.03 Å) | 主引用文献 | Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody. Nat Commun, 14, 2023
|
|
8GZX
| Escherichia coli FtsZ complexed with monobody (P212121) | 分子名称: | Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody | 著者 | Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H. | 登録日 | 2022-09-27 | 公開日 | 2023-07-19 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody. Nat Commun, 14, 2023
|
|
8GZY
| Escherichia coli FtsZ complexed with monobody (P21) | 分子名称: | Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody | 著者 | Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H. | 登録日 | 2022-09-27 | 公開日 | 2023-07-19 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody. Nat Commun, 14, 2023
|
|
8GZV
| Klebsiella pneumoniae FtsZ complexed with monobody (P212121) | 分子名称: | Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody | 著者 | Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H. | 登録日 | 2022-09-27 | 公開日 | 2023-07-19 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody. Nat Commun, 14, 2023
|
|
8GZW
| Klebsiella pneumoniae FtsZ complexed with monobody (P21) | 分子名称: | Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE, Monobody | 著者 | Matsumura, H, Yoshizawa, T, Fujita, J, Tanaka, S, Amesaka, H. | 登録日 | 2022-09-27 | 公開日 | 2023-07-19 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structures of a FtsZ single protofilament and a double-helical tube in complex with a monobody. Nat Commun, 14, 2023
|
|