Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 321 件

1UDD
DownloadVisualize
BU of 1udd by Molmil
TenA homologue protein from P.horikoshii OT3
分子名称: transcriptional regulator
著者Itou, H, Yao, M, Watanabe, N, Tanaka, I.
登録日2003-04-28
公開日2004-06-01
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure analysis of PH1161 protein, a transcriptional activator TenA homologue from the hyperthermophilic archaeon Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 60, 2004
1BQF
DownloadVisualize
BU of 1bqf by Molmil
GROWTH-BLOCKING PEPTIDE (GBP) FROM PSEUDALETIA SEPARATA
分子名称: PROTEIN (GROWTH-BLOCKING PEPTIDE)
著者Aizawa, T, Fujitani, N, Hayakawa, Y, Ohnishi, A, Ohkubo, T, Kwano, K, Hikichi, K, Nitta, K.
登録日1998-08-09
公開日1998-12-09
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of an insect growth factor, growth-blocking peptide.
J.Biol.Chem., 274, 1999
1WQA
DownloadVisualize
BU of 1wqa by Molmil
Crystal Structure of Pyrococcus horikoshii phosphomannomutase/phosphoglucomutase complexed with Mg2+
分子名称: MAGNESIUM ION, phospho-sugar mutase
著者Kawamura, T, Tsuge, M, Watanabe, N, Tanaka, I.
登録日2004-09-24
公開日2005-10-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Pyrococcus horikoshii phosphomannomutase/phosphoglucomutase
To be Published
1WE5
DownloadVisualize
BU of 1we5 by Molmil
Crystal Structure of Alpha-Xylosidase from Escherichia coli
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative family 31 glucosidase yicI
著者Ose, T, Kitamura, M, Okuyama, M, Mori, H, Kimura, A, Watanabe, N, Yao, M, Tanaka, I.
登録日2004-05-24
公開日2005-02-15
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Alpha-Xylosidase from Escherichia coli
TO BE PUBLISHED
1WZC
DownloadVisualize
BU of 1wzc by Molmil
Crystal structure of Pyrococcus horikoshii mannosyl-3-phosphoglycerate phosphatase complexed with MG2+ and phosphate
分子名称: MAGNESIUM ION, Mannosyl-3-phosphoglycerate phosphatase, PHOSPHATE ION
著者Kawamura, T, Watanabe, N, Tanaka, I.
登録日2005-03-04
公開日2006-02-28
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of mannosyl-3-phosphoglycerate phosphatase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
1CCR
DownloadVisualize
BU of 1ccr by Molmil
STRUCTURE OF RICE FERRICYTOCHROME C AT 2.0 ANGSTROMS RESOLUTION
分子名称: CYTOCHROME C, HEME C
著者Ochi, H, Hata, Y, Tanaka, N, Kakudo, M, Sakurai, T, Aihara, S, Morita, Y.
登録日1983-03-14
公開日1983-04-21
最終更新日2021-03-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of rice ferricytochrome c at 2.0 A resolution.
J.Mol.Biol., 166, 1983
1VCI
DownloadVisualize
BU of 1vci by Molmil
Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3 complexed with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, sugar-binding transport ATP-binding protein
著者Ose, T, Fujie, T, Yao, M, Watanabe, N, Tanaka, I.
登録日2004-03-08
公開日2004-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3
Proteins, 57, 2004
1VDZ
DownloadVisualize
BU of 1vdz by Molmil
Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, A-type ATPase subunit A
著者Maegawa, Y, Morita, H, Yao, M, Watanabe, N, Tanaka, I.
登録日2004-03-26
公開日2005-06-21
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of A-type ATPase catalytic subunit A from Pyrococcus horikoshii OT3
To be Published
1V43
DownloadVisualize
BU of 1v43 by Molmil
Crystal Structure of ATPase subunit of ABC Sugar Transporter
分子名称: sugar-binding transport ATP-binding protein
著者Ose, T, Fujie, T, Yao, M, Watanabe, N, Tanaka, I.
登録日2003-11-08
公開日2004-11-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3
Proteins, 57, 2004
1ULY
DownloadVisualize
BU of 1uly by Molmil
Crystal structure analysis of the ArsR homologue DNA-binding protein from P. horikoshii OT3
分子名称: hypothetical protein PH1932
著者Itou, H, Yao, M, Watanabe, N, Tanaka, I.
登録日2003-09-17
公開日2004-10-19
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the PH1932 protein, a unique archaeal ArsR type winged-HTH transcription factor from Pyrococcus horikoshii OT3
Proteins, 70, 2008
1IRJ
DownloadVisualize
BU of 1irj by Molmil
Crystal Structure of the MRP14 complexed with CHAPS
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CALCIUM ION, Migration Inhibitory Factor-Related Protein 14
著者Itou, H, Yao, M, Watanabe, N, Nishihira, J, Tanaka, I.
登録日2001-10-09
公開日2002-02-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of human MRP14 (S100A9), a Ca(2+)-dependent regulator protein in inflammatory process.
J.Mol.Biol., 316, 2002
2CVI
DownloadVisualize
BU of 2cvi by Molmil
Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 75aa long hypothetical regulatory protein AsnC, POTASSIUM ION
著者Kitago, Y, Sakai, N, Matsumoto, D, Yao, M, Aizawa, T, Demura, M, Kawano, K, Nitta, K, Watanabe, N, Tanaka, I.
登録日2005-06-03
公開日2006-06-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of hypothetical protein PHS023 from Pyrococcus horikoshii
TO BE PUBLISHED
2D5K
DownloadVisualize
BU of 2d5k by Molmil
Crystal structure of Dps from Staphylococcus aureus
分子名称: Dps family protein, GLYCEROL
著者Tanaka, Y, Yao, M, Watanabe, N, Tanaka, I.
登録日2005-11-02
公開日2006-10-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Nucleoid compaction by MrgA(Asp56Ala/Glu60Ala) does not contribute to staphylococcal cell survival against oxidative stress and phagocytic killing by macrophages
FEMS Microbiol. Lett., 360, 2014
5H41
DownloadVisualize
BU of 5h41 by Molmil
Crystal Structure of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans in complex with sophorose, isofagomine, sulfate ion
分子名称: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, SULFATE ION, Uncharacterized protein, ...
著者Nakajima, M, Tanaka, N, Furukawa, N, Nihira, T, Kodutsumi, Y, Takahashi, Y, Sugimoto, N, Miyanaga, A, Fushinobu, S, Taguchi, H, Nakai, H.
登録日2016-10-28
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanistic insight into the substrate specificity of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
Sci Rep, 7, 2017
5H3Z
DownloadVisualize
BU of 5h3z by Molmil
Crystal Structure of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Nakajima, M, Tanaka, N, Furukawa, N, Nihira, T, Kodutsumi, Y, Takahashi, Y, Sugimoto, N, Miyanaga, A, Fushinobu, S, Taguchi, H, Nakai, H.
登録日2016-10-28
公開日2017-03-01
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Mechanistic insight into the substrate specificity of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
Sci Rep, 7, 2017
5H42
DownloadVisualize
BU of 5h42 by Molmil
Crystal Structure of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans in complex with alpha-d-glucose-1-phosphate
分子名称: 1-O-phosphono-alpha-D-glucopyranose, Uncharacterized protein, alpha-D-glucopyranose
著者Nakajima, M, Tanaka, N, Furukawa, N, Nihira, T, Kodutsumi, Y, Takahashi, Y, Sugimoto, N, Miyanaga, A, Fushinobu, S, Taguchi, H, Nakai, H.
登録日2016-10-28
公開日2017-03-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanistic insight into the substrate specificity of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
Sci Rep, 7, 2017
5H40
DownloadVisualize
BU of 5h40 by Molmil
Crystal Structure of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans in complex with sophorose
分子名称: CALCIUM ION, GLYCEROL, Uncharacterized protein, ...
著者Nakajima, M, Tanaka, N, Furukawa, N, Nihira, T, Kodutsumi, Y, Takahashi, Y, Sugimoto, N, Miyanaga, A, Fushinobu, S, Taguchi, H, Nakai, H.
登録日2016-10-28
公開日2017-03-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanistic insight into the substrate specificity of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
Sci Rep, 7, 2017
7VKX
DownloadVisualize
BU of 7vkx by Molmil
The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with glucose
分子名称: CALCIUM ION, beta-1,2-glucosyltransferase, beta-D-glucopyranose
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VL5
DownloadVisualize
BU of 7vl5 by Molmil
The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with n-octyl-beta-D-glucoside
分子名称: Beta-galactosidase, CALCIUM ION, octyl beta-D-glucopyranoside
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VL7
DownloadVisualize
BU of 7vl7 by Molmil
The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with esculin
分子名称: 6-[(2S,3R,4S,5S,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-7-oxidanyl-chromen-2-one, CALCIUM ION, beta-1,2-glucosyltransferase
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VKW
DownloadVisualize
BU of 7vkw by Molmil
The apo structure of beta-1,2-glucosyltransferase from Ignavibacterium album
分子名称: beta-1,2-glucosyltransferase
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VL2
DownloadVisualize
BU of 7vl2 by Molmil
The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with ethyl alpha-D-Glucoside
分子名称: (2~{S},3~{R},4~{S},5~{S},6~{R})-2-ethoxy-6-(hydroxymethyl)oxane-3,4,5-triol, CALCIUM ION, beta-1,2-glucosyltransferase
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VKZ
DownloadVisualize
BU of 7vkz by Molmil
The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with 1-Deoxynojirimycin
分子名称: 1-DEOXYNOJIRIMYCIN, CALCIUM ION, beta-1,2-glucosyltransferase
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VKY
DownloadVisualize
BU of 7vky by Molmil
The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with sophorose
分子名称: CALCIUM ION, beta-1,2-glucosyltransferase, beta-D-glucopyranose-(1-2)-alpha-D-glucopyranose, ...
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022
7VL3
DownloadVisualize
BU of 7vl3 by Molmil
The complex structure of beta-1,2-glucosyltransferase from Ignavibacterium album with phenyl alpha-D-glucoside
分子名称: (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-phenoxy-oxane-3,4,5-triol, CALCIUM ION, beta-1,2-glucosyltransferase
著者Kobayashi, K, Shimizu, H, Tanaka, N, Kuramochi, K, Nakai, H, Nakajima, M, Taguchi, H.
登録日2021-10-01
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Characterization and structural analyses of a novel glycosyltransferase acting on the beta-1,2-glucosidic linkages.
J.Biol.Chem., 298, 2022

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon