1WOM
| Crystal structure of RsbQ | 分子名称: | MALONIC ACID, S-1,2-PROPANEDIOL, Sigma factor sigB regulation protein rsbQ | 著者 | Kaneko, T, Kumasaka, T, Tanaka, N. | 登録日 | 2004-08-21 | 公開日 | 2005-02-01 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structures of RsbQ, a stress-response regulator in Bacillus subtilis Protein Sci., 14, 2005
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6F1F
| The methylene thioacetal BPTI (Bovine Pancreatic Trypsin Inhibitor) mutant structure | 分子名称: | GLYCEROL, Pancreatic trypsin inhibitor, SULFATE ION | 著者 | Lansky, S, Mousa, R, Metanis, N, Shoham, G. | 登録日 | 2017-11-21 | 公開日 | 2018-07-18 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (1.716 Å) | 主引用文献 | BPTI folding revisited: switching a disulfide into methylene thioacetal reveals a previously hidden path. Chem Sci, 9, 2018
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3KGD
| Crystal structure of E. coli RNA 3' cyclase | 分子名称: | ADENOSINE MONOPHOSPHATE, GLYCEROL, RNA 3'-terminal phosphate cyclase, ... | 著者 | Shuman, S, Tanaka, N, Smith, P. | 登録日 | 2009-10-28 | 公開日 | 2010-04-21 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | 主引用文献 | Structure of the RNA 3'-phosphate cyclase-adenylate intermediate illuminates nucleotide specificity and covalent nucleotidyl transfer. Structure, 18, 2010
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2TAA
| STRUCTURE AND POSSIBLE CATALYTIC RESIDUES OF TAKA-AMYLASE A | 分子名称: | CALCIUM ION, TAKA-AMYLASE A | 著者 | Kusunoki, M, Matsuura, Y, Tanaka, N, Kakudo, M. | 登録日 | 1982-10-18 | 公開日 | 1982-10-21 | 最終更新日 | 2024-06-05 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structure and possible catalytic residues of Taka-amylase A J.Biochem.(Tokyo), 95, 1984
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5Z06
| Crystal structure of beta-1,2-glucanase from Parabacteroides distasonis | 分子名称: | BDI_3064 protein, CALCIUM ION, GLYCEROL | 著者 | Shimizu, H, Nakajima, M, Miyanaga, A, Takahashi, Y, Tanaka, N, Kobayashi, K, Sugimoto, N, Nakai, H, Taguchi, H. | 登録日 | 2017-12-18 | 公開日 | 2018-05-30 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Characterization and Structural Analysis of a Novel exo-Type Enzyme Acting on beta-1,2-Glucooligosaccharides from Parabacteroides distasonis Biochemistry, 57, 2018
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1GC9
| THE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS 3-ISOPROPYLMALATE DEHYDROGENASE MUTATED AT 172TH FROM ALA TO GLY | 分子名称: | 3-ISOPROPYLMALATE DEHYDROGENASE | 著者 | Qu, C, Akanuma, S, Tanaka, N, Moriyama, H, Oshima, T. | 登録日 | 2000-07-28 | 公開日 | 2000-09-27 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Design, X-ray crystallography, molecular modelling and thermal stability studies of mutant enzymes at site 172 of 3-isopropylmalate dehydrogenase from Thermus thermophilus. Acta Crystallogr.,Sect.D, 57, 2001
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1V9I
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1V9E
| Crystal Structure Analysis of Bovine Carbonic Anhydrase II | 分子名称: | Carbonic anhydrase II, ZINC ION | 著者 | Saito, R, Sato, T, Ikai, A, Tanaka, N. | 登録日 | 2004-01-26 | 公開日 | 2004-02-10 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Structure of bovine carbonic anhydrase II at 1.95 A resolution. Acta Crystallogr.,Sect.D, 60, 2004
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1GC8
| THE CRYSTAL STRUCTURE OF THERMUS THERMOPHILUS 3-ISOPROPYLMALATE DEHYDROGENASE MUTATED AT 172TH FROM ALA TO PHE | 分子名称: | 3-ISOPROPYLMALATE DEHYDROGENASE | 著者 | Qu, C, Akanuma, S, Tanaka, N, Moriyama, H, Oshima, T. | 登録日 | 2000-07-27 | 公開日 | 2000-09-27 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Design, X-ray crystallography, molecular modelling and thermal stability studies of mutant enzymes at site 172 of 3-isopropylmalate dehydrogenase from Thermus thermophilus. Acta Crystallogr.,Sect.D, 57, 2001
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3A3C
| Crystal structure of TIM40/MIA40 fusing MBP, C296S and C298S mutant | 分子名称: | Maltose-binding periplasmic protein, LINKER, Mitochondrial intermembrane space import and assembly protein 40, ... | 著者 | Kawano, S, Naoe, M, Momose, T, Watanabe, N, Endo, T. | 登録日 | 2009-06-11 | 公開日 | 2009-08-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Structural basis of yeast Tim40/Mia40 as an oxidative translocator in the mitochondrial intermembrane space. Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZXT
| Crystal structure of Tim40/MIA40, a disulfide relay system in mitochondria, solved as MBP fusion protein | 分子名称: | Maltose-binding periplasmic protein, LINKER, Mitochondrial intermembrane space import and assembly protein 40, ... | 著者 | Kawano, S, Momose, T, Watanabe, N, Endo, T. | 登録日 | 2009-01-07 | 公開日 | 2009-08-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Structural basis of yeast Tim40/Mia40 as an oxidative translocator in the mitochondrial intermembrane space. Proc.Natl.Acad.Sci.USA, 106, 2009
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1OSJ
| STRUCTURE OF 3-ISOPROPYLMALATE DEHYDROGENASE | 分子名称: | 3-ISOPROPYLMALATE DEHYDROGENASE | 著者 | Qu, C, Akanuma, S, Moriyama, H, Tanaka, N, Oshima, T. | 登録日 | 1996-10-22 | 公開日 | 1997-01-27 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.35 Å) | 主引用文献 | A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase. Protein Eng., 10, 1997
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1OSI
| STRUCTURE OF 3-ISOPROPYLMALATE DEHYDROGENASE | 分子名称: | 3-ISOPROPYLMALATE DEHYDROGENASE | 著者 | Qu, C, Akanuma, S, Moriyama, H, Tanaka, N, Oshima, T. | 登録日 | 1996-10-22 | 公開日 | 1997-01-27 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | A mutation at the interface between domains causes rearrangement of domains in 3-isopropylmalate dehydrogenase. Protein Eng., 10, 1997
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7CAT
| The NADPH binding site on beef liver catalase | 分子名称: | CATALASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Murthy, M.R.N, Reid III, T.J, Sicignano, A, Tanaka, N, Fita, I, Rossmann, M.G. | 登録日 | 1984-11-15 | 公開日 | 1985-04-01 | 最終更新日 | 2023-09-27 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | The NADPH binding site on beef liver catalase. Proc.Natl.Acad.Sci.USA, 82, 1985
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3ANX
| Crystal structure of triamine/agmatine aminopropyltransferase (SPEE) from thermus thermophilus, complexed with MTA | 分子名称: | 5'-DEOXY-5'-METHYLTHIOADENOSINE, spermidine synthase | 著者 | Ganbe, T, Ohnuma, M, Sato, T, Tanaka, N, Oshima, T, Kumasaka, T. | 登録日 | 2010-09-14 | 公開日 | 2011-04-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Crystal structures and enzymatic properties of a triamine/agmatine aminopropyltransferase from Thermus thermophilus J.Mol.Biol., 408, 2011
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4XEN
| High pressure protein crystallography of hen egg white lysozyme in complex with Tetra-N-acetylchitotetraose at 920 MPa | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Lysozyme C, ... | 著者 | Yamada, H, Watanabe, N, Nagae, T. | 登録日 | 2014-12-24 | 公開日 | 2015-04-08 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | High-pressure protein crystallography of hen egg-white lysozyme Acta Crystallogr.,Sect.D, 71, 2015
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2DCJ
| A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1 | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, GLYCEROL, ... | 著者 | Ihsanawati, Tanaka, N, Nakamura, S, Kumasaka, T. | 登録日 | 2006-01-07 | 公開日 | 2007-03-20 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.24 Å) | 主引用文献 | A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1 To be Published
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3AU9
| Crystal structure of the quaternary complex-1 of an isomerase | 分子名称: | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID, CALCIUM ION, ... | 著者 | Umeda, T, Tanaka, N, Kusakabe, Y, Nakanishi, M, Kitade, Y, Nakamura, K.T. | 登録日 | 2011-02-01 | 公開日 | 2011-08-10 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Molecular basis of fosmidomycin's action on the human malaria parasite Plasmodium falciparum Sci Rep, 1, 2011
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2DCK
| A tetragonal-lattice structure of alkaliphilic XynJ from Bacillus sp. 41M-1 | 分子名称: | CALCIUM ION, GLYCEROL, xylanase J | 著者 | Fibriansah, G, Ihsanawati, Tanaka, N, Nakamura, S, Kumasaka, T. | 登録日 | 2006-01-07 | 公開日 | 2007-03-20 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1 To be Published
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2P6V
| Structure of TAFH domain of the human TAF4 subunit of TFIID | 分子名称: | SULFATE ION, Transcription initiation factor TFIID subunit 4 | 著者 | Wang, X, Truckses, D.M, Takada, S, Matsumura, T, Tanese, N, Jacobson, R.H. | 登録日 | 2007-03-19 | 公開日 | 2007-05-15 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Conserved region I of human coactivator TAF4 binds to a short hydrophobic motif present in transcriptional regulators. Proc.Natl.Acad.Sci.Usa, 104, 2007
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4XZY
| Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis | 分子名称: | GLYCEROL, Peptidase S46 | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2015-02-05 | 公開日 | 2015-07-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity. Sci Rep, 5, 2015
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4Y02
| Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis (Ground) | 分子名称: | GLYCEROL, POTASSIUM ION, Peptidase S46 | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2015-02-05 | 公開日 | 2015-07-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.96 Å) | 主引用文献 | Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity. Sci Rep, 5, 2015
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4Y01
| Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis | 分子名称: | GLYCEROL, Peptidase S46 | 著者 | Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2015-02-05 | 公開日 | 2015-07-15 | 最終更新日 | 2020-02-05 | 実験手法 | X-RAY DIFFRACTION (2.46 Å) | 主引用文献 | Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity. Sci Rep, 5, 2015
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4Y06
| Crystal structure of the DAP BII (G675R) dipeptide complex | 分子名称: | Dipeptidyl aminopeptidase BII, GLUTAMIC ACID, GLYCEROL, ... | 著者 | Sakamoto, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2015-02-05 | 公開日 | 2015-07-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.18 Å) | 主引用文献 | Structural and mutational analyses of dipeptidyl peptidase 11 from Porphyromonas gingivalis reveal the molecular basis for strict substrate specificity. Sci Rep, 5, 2015
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7DKD
| Stenotrophomonas maltophilia DPP7 in complex with Asn-Tyr | 分子名称: | ASPARAGINE, Dipeptidyl-peptidase, GLYCEROL, ... | 著者 | Sakamoto, Y, Nakamura, A, Suzuki, Y, Honma, N, Roppongi, S, Kushibiki, C, Yonezawa, N, Takahashi, M, Shida, Y, Gouda, H, Nonaka, T, Ogasawara, W, Tanaka, N. | 登録日 | 2020-11-23 | 公開日 | 2021-11-03 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.92 Å) | 主引用文献 | Structural basis for an exceptionally strong preference for asparagine residue at the S2 subsite of Stenotrophomonas maltophilia dipeptidyl peptidase 7. Sci Rep, 11, 2021
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