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PDB: 1033 件

1CJ9
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T40V MUTANT HUMAN LYSOZYME
分子名称: PROTEIN (LYSOZYME), SODIUM ION
著者Takano, K, Yamagata, Y, Funahashi, J, Yutani, K.
登録日1999-04-22
公開日1999-04-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of intra- and intermolecular hydrogen bonds to the conformational stability of human lysozyme(,).
Biochemistry, 38, 1999
2DPX
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Crystal Structure of human Rad GTPase
分子名称: GTP-binding protein RAD, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Yanuar, A, Sakurai, S, Kitano, K, Hakoshima, T.
登録日2006-05-18
公開日2006-08-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of human Rad GTPase of the RGK-family
Genes Cells, 11, 2006
2E66
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Crystal Structure Of CutA1 From Pyrococcus Horikoshii OT3, Mutation D60A
分子名称: CHLORIDE ION, Divalent-cation tolerance protein cutA, SODIUM ION
著者Bagautdinov, B, Sawano, M, Bagautdinova, S, Yutani, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-25
公開日2007-06-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the hyper-thermostability of CutA1
To be Published
1GB6
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CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS
分子名称: LYSOZYME, SODIUM ION
著者Funahashi, J, Takano, K, Yamagata, Y, Yutani, K.
登録日2000-06-26
公開日2000-07-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Role of surface hydrophobic residues in the conformational stability of human lysozyme at three different positions.
Biochemistry, 39, 2000
1GFH
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CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS
分子名称: LYSOZYME, SODIUM ION
著者Funahashi, J, Takano, K, Yamagata, Y, Yutani, K.
登録日2000-12-04
公開日2000-12-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Positive contribution of hydration structure on the surface of human lysozyme to the conformational stability.
J.Biol.Chem., 277, 2002
1GFT
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CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS
分子名称: LYSOZYME, SODIUM ION
著者Funahashi, J, Takano, K, Yamagata, Y, Yutani, K.
登録日2000-12-04
公開日2000-12-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Positive contribution of hydration structure on the surface of human lysozyme to the conformational stability.
J.Biol.Chem., 277, 2002
1GBY
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CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS
分子名称: LYSOZYME, SODIUM ION
著者Funahashi, J, Takano, K, Yamagata, Y, Yutani, K.
登録日2000-06-26
公開日2000-07-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Role of surface hydrophobic residues in the conformational stability of human lysozyme at three different positions.
Biochemistry, 39, 2000
1GDX
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CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT LEFT-HANDED HELICAL POSITIONS
分子名称: LYSOZYME C, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-10-06
公開日2000-11-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Role of non-glycine residues in left-handed helical conformation for the conformational stability of human lysozyme
Proteins, 44, 2001
1VC2
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Crystal structure of Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
分子名称: Glyceraldehyde 3-Phosphate Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-04
公開日2004-03-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
To be Published
1V9J
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Solution structure of a BolA-like protein from Mus musculus
分子名称: BolA-like protein RIKEN cDNA 1110025L05
著者Kasai, T, Inoue, M, Koshiba, S, Yabuki, T, Aoki, M, Nunokawa, E, Seki, E, Matsuda, T, Matsuda, N, Tomo, Y, Shirouzu, M, Terada, T, Obayashi, N, Hamana, H, Shinya, N, Tatsuguchi, A, Yasuda, S, Yoshida, M, Hirota, H, Matsuo, Y, Tani, K, Suzuki, H, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-01-26
公開日2004-02-10
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of a BolA-like protein from Mus musculus
Protein Sci., 13, 2004
1WXR
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Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli
分子名称: haemoglobin protease
著者Otto, B.R, Sijbrandi, R, Luirink, J, Oudega, B, Heddle, J.G, Mizutani, K, Park, S.-Y, Tame, J.R.H.
登録日2005-01-31
公開日2005-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of heme binding protein, an autotransporter hemoglobin protease from pathogenic escherichia coli
J.Biol.Chem., 280, 2005
1WN1
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Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
分子名称: COBALT (II) ION, dipeptidase
著者Jeyakanthan, J, Taka, J, Kitaguchi, Y, Shiro, Y, Yokoyama, S, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-26
公開日2005-08-09
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
To be Published
1WVM
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Crystal Structure of Psychrophilic Subtilisin-like Serine Protease APA1 from Antarctic Psychrotroph Pseudoaleromonas sp. AS-11, Complexed with Inhibitor Chymostatin
分子名称: CALCIUM ION, CHYMOSTATIN, MAGNESIUM ION, ...
著者Dong, D, Watanabe, K.
登録日2004-12-16
公開日2006-03-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.16 nm resolution
To be Published
5CL2
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Crystal structure of Spo0M, sporulation control protein, from Bacillus subtilis.
分子名称: SODIUM ION, Sporulation-control protein spo0M
著者Sonoda, Y, Mizutani, K, Mikami, B.
登録日2015-07-16
公開日2015-12-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Spo0M, a sporulation-control protein from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 71, 2015
5CPS
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Disproportionating enzyme 1 from Arabidopsis - maltotriose soak
分子名称: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, ...
著者O'Neill, E.C, Stevenson, C.E.M, Tantanarat, K, Latousakis, D, Donaldson, M.I, Rejzek, M, Limpaseni, T, Smith, A.M, Field, R.A, Lawson, D.M.
登録日2015-07-21
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Dissection of the Maltodextrin Disproportionation Cycle of the Arabidopsis Plastidial Disproportionating Enzyme 1 (DPE1).
J.Biol.Chem., 290, 2015
5CPQ
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Disproportionating enzyme 1 from Arabidopsis - apo form
分子名称: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic
著者O'Neill, E.C, Stevenson, C.E.M, Tantanarat, K, Latousakis, D, Donaldson, M.I, Rejzek, M, Limpaseni, T, Smith, A.M, Field, R.A, Lawson, D.M.
登録日2015-07-21
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structural Dissection of the Maltodextrin Disproportionation Cycle of the Arabidopsis Plastidial Disproportionating Enzyme 1 (DPE1).
J.Biol.Chem., 290, 2015
5CQ1
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Disproportionating enzyme 1 from Arabidopsis - cycloamylose soak
分子名称: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, ...
著者O'Neill, E.C, Stevenson, C.E.M, Tantanarat, K, Latousakis, D, Donaldson, M.I, Rejzek, M, Limpaseni, T, Smith, A.M, Field, R.A, Lawson, D.M.
登録日2015-07-21
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Dissection of the Maltodextrin Disproportionation Cycle of the Arabidopsis Plastidial Disproportionating Enzyme 1 (DPE1).
J.Biol.Chem., 290, 2015
5CSY
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Disproportionating enzyme 1 from Arabidopsis - acarbose soak
分子名称: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, ...
著者O'Neill, E.C, Stevenson, C.E.M, Tantanarat, K, Latousakis, D, Donaldson, M.I, Rejzek, M, Limpaseni, T, Smith, A.M, Field, R.A, Lawson, D.M.
登録日2015-07-23
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Dissection of the Maltodextrin Disproportionation Cycle of the Arabidopsis Plastidial Disproportionating Enzyme 1 (DPE1).
J.Biol.Chem., 290, 2015
5CPT
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Disproportionating enzyme 1 from Arabidopsis - beta cyclodextrin soak
分子名称: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, ...
著者O'Neill, E.C, Stevenson, C.E.M, Tantanarat, K, Latousakis, D, Donaldson, M.I, Rejzek, M, Limpaseni, T, Smith, A.M, Field, R.A, Lawson, D.M.
登録日2015-07-21
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Dissection of the Maltodextrin Disproportionation Cycle of the Arabidopsis Plastidial Disproportionating Enzyme 1 (DPE1).
J.Biol.Chem., 290, 2015
1VD6
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Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
分子名称: GLYCEROL, Glycerophosphoryl Diester Phosphodiesterase
著者Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-03-18
公開日2005-04-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal Structure of Glycerophosphoryl Diester Phosphodiesterase complexed with Glycerol
To be Published
5CSU
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Disproportionating enzyme 1 from Arabidopsis - acarviostatin soak
分子名称: 1,2-ETHANEDIOL, 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic, ...
著者O'Neill, E.C, Stevenson, C.E.M, Tantanarat, K, Latousakis, D, Donaldson, M.I, Rejzek, M, Limpaseni, T, Smith, A.M, Field, R.A, Lawson, D.M.
登録日2015-07-23
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Structural Dissection of the Maltodextrin Disproportionation Cycle of the Arabidopsis Plastidial Disproportionating Enzyme 1 (DPE1).
J.Biol.Chem., 290, 2015
1V9K
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The crystal structure of the catalytic domain of pseudouridine synthase RluC from Escherichia coli
分子名称: Ribosomal large subunit pseudouridine synthase C, SULFATE ION
著者Machida, Y, Mizutani, K, Unzai, S, Park, S.-Y, Tame, J.R.H.
登録日2004-01-26
公開日2004-05-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli
Biochemistry, 43, 2004
1Y9Z
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Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, SODIUM ION, ...
著者Dong, D, Watanabe, K.
登録日2004-12-16
公開日2006-03-21
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
To be Published
6IZP
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Solution structure of the complex of naphthyridine carbamate dimer and an RNA with UGGAA-UGGAA pentad
分子名称: 3-[3-[(7-methyl-1,8-naphthyridin-2-yl)carbamoyloxy]propylamino]propyl ~{N}-(7-methyl-1,8-naphthyridin-2-yl)carbamate, RNA (29-MER)
著者Nagano, K, Shibata, T, Nakatani, K, Kawai, G.
登録日2018-12-20
公開日2019-12-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Small molecule targeting r(UGGAA)n disrupts RNA foci and alleviates disease phenotype in Drosophila model
Nat Commun, 12, 2021
2Z84
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Insights from crystal and solution structures of mouse UfSP1
分子名称: Ufm1-specific protease 1
著者Ha, B.H, Ahn, H.C, Kang, S.H, Tanaka, K, Chung, C.H, Kim, E.E.
登録日2007-08-30
公開日2008-03-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for Ufm1 processing by UfSP1
J. Biol. Chem., 283, 2008

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