Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1033 results

2BQM
DownloadVisualize
BU of 2bqm by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
2BQH
DownloadVisualize
BU of 2bqh by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
2BQO
DownloadVisualize
BU of 2bqo by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
2BQF
DownloadVisualize
BU of 2bqf by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
2BQK
DownloadVisualize
BU of 2bqk by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
2BQN
DownloadVisualize
BU of 2bqn by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
2BQG
DownloadVisualize
BU of 2bqg by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
1IP2
DownloadVisualize
BU of 1ip2 by Molmil
G48A HUMAN LYSOZYME
Descriptor: LYSOZYME C, SODIUM ION
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:2001-04-20
Release date:2001-11-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of amino acid residues in left-handed helical conformation for the conformational stability of a protein.
Proteins, 45, 2001
1IX0
DownloadVisualize
BU of 1ix0 by Molmil
I59A-3SS human lysozyme
Descriptor: SODIUM ION, lysozyme
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:2002-06-06
Release date:2003-07-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Buried water molecules contribute to the conformational stability of a protein
PROTEIN ENG., 16, 2003
1UB8
DownloadVisualize
BU of 1ub8 by Molmil
Crystal structure of d(GCGAAGC), bending duplex with a bulge-in residue
Descriptor: 5'-D(*GP*CP*GP*AP*AP*GP*C)-3', COBALT HEXAMMINE(III)
Authors:Sunami, T, Kondo, J, Hirao, I, Watanabe, K, Miura, K, Takenaka, A.
Deposit date:2003-03-31
Release date:2004-03-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of d(GCGAAGC) and d(GCGAAAGC) (tetragonal form): a switching of partners of the sheared G.A pairs to form a functional G.AxA.G crossing.
Acta Crystallogr.,Sect.D, 60, 2004
1WN1
DownloadVisualize
BU of 1wn1 by Molmil
Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
Descriptor: COBALT (II) ION, dipeptidase
Authors:Jeyakanthan, J, Taka, J, Kitaguchi, Y, Shiro, Y, Yokoyama, S, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-07-26
Release date:2005-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
To be Published
1WVM
DownloadVisualize
BU of 1wvm by Molmil
Crystal Structure of Psychrophilic Subtilisin-like Serine Protease APA1 from Antarctic Psychrotroph Pseudoaleromonas sp. AS-11, Complexed with Inhibitor Chymostatin
Descriptor: CALCIUM ION, CHYMOSTATIN, MAGNESIUM ION, ...
Authors:Dong, D, Watanabe, K.
Deposit date:2004-12-16
Release date:2006-03-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.16 nm resolution
To be Published
2BQI
DownloadVisualize
BU of 2bqi by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
2BQD
DownloadVisualize
BU of 2bqd by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
2BQL
DownloadVisualize
BU of 2bql by Molmil
CONTRIBUTION OF HYDROPHOBIC EFFECT TO THE CONFORMATIONAL STABILITY OF HUMAN LYSOZYME
Descriptor: LYSOZYME, SODIUM ION
Authors:Takano, K, Yamagata, Y, Yutani, K.
Deposit date:1998-05-21
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A general rule for the relationship between hydrophobic effect and conformational stability of a protein: stability and structure of a series of hydrophobic mutants of human lysozyme.
J.Mol.Biol., 280, 1998
5GLH
DownloadVisualize
BU of 5glh by Molmil
Human endothelin receptor type-B in complex with ET-1
Descriptor: Endothelin Receptor Subtype-B, Peptide from Endothelin-1
Authors:Shihoya, W, Nishizawa, T, Okuta, A, Tani, K, Fujiyoshi, Y, Dohmae, N, Nureki, O, Doi, T.
Deposit date:2016-07-11
Release date:2016-09-07
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Activation mechanism of endothelin ETB receptor by endothelin-1.
Nature, 537, 2016
1UE4
DownloadVisualize
BU of 1ue4 by Molmil
Crystal structure of d(GCGAAAGC)
Descriptor: 5'-D(*GP*CP*GP*AP*AP*AP*GP*C)-3', MAGNESIUM ION
Authors:Sunami, T, Kondo, J, Hirao, I, Watanabe, K, Miura, K, Takenaka, A.
Deposit date:2003-05-09
Release date:2004-03-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of d(GCGAAGC) and d(GCGAAAGC) (tetragonal form): a switching of partners of the sheared G.A pairs to form a functional G.AxA.G crossing.
Acta Crystallogr.,Sect.D, 60, 2004
4JY2
DownloadVisualize
BU of 4jy2 by Molmil
Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, native and unliganded form
Descriptor: 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase, BETA-MERCAPTOETHANOL, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kobayashi, J, Yoshida, H, Kamitori, S, Hayashi, H, Mizutani, K, Takahashi, N, Mikami, B, Yagi, T.
Deposit date:2013-03-28
Release date:2014-04-02
Method:X-RAY DIFFRACTION (1.935 Å)
Cite:Crystal structure of 2-methyl-3-hydroxypyridine-5-carboxylic acid oxygenase
To be Published
1Y9Z
DownloadVisualize
BU of 1y9z by Molmil
Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, SODIUM ION, ...
Authors:Dong, D, Watanabe, K.
Deposit date:2004-12-16
Release date:2006-03-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Psychrophilic Subtilisin-like Serine Protease from Antarctic Psychrotroph Pseudoalteromonas sp. AS-11 at 0.14 nm resolution
To be Published
5H1R
DownloadVisualize
BU of 5h1r by Molmil
C. elegans INX-6 gap junction channel
Descriptor: Innexin-6
Authors:Oshima, A, Tani, K, Fujiyoshi, Y.
Deposit date:2016-10-11
Release date:2016-12-07
Last modified:2017-02-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Atomic structure of the innexin-6 gap junction channel determined by cryo-EM
Nat Commun, 7, 2016
5GLI
DownloadVisualize
BU of 5gli by Molmil
Human endothelin receptor type-B in the ligand-free form
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Endothelin Receptor Subtype-B, OLEIC ACID, ...
Authors:Shihoya, W, Nishizawa, T, Okuta, A, Tani, K, Fujiyoshi, Y, Dohmae, N, Nureki, O, Doi, T.
Deposit date:2016-07-11
Release date:2016-09-07
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Activation mechanism of endothelin ETB receptor by endothelin-1.
Nature, 537, 2016
7BR0
DownloadVisualize
BU of 7br0 by Molmil
Crystal structure of AclR, a thioredoxin oxidoreductase fold protein carrying the CXXH catalytic motif
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Pyr_redox_2 domain-containing protein
Authors:Hara, K, Hashimoto, H, Maeda, N, Watanabe, K, Hertweck, C, Tsunematsu, Y.
Deposit date:2020-03-26
Release date:2020-12-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Specialized Flavoprotein Promotes Sulfur Migration and Spiroaminal Formation in Aspirochlorine Biosynthesis.
J.Am.Chem.Soc., 143, 2021
1LHH
DownloadVisualize
BU of 1lhh by Molmil
ROLE OF PROLINE RESIDUES IN HUMAN LYSOZYME STABILITY: A SCANNING CALORIMETRIC STUDY COMBINED WITH X-RAY STRUCTURE ANALYSIS OF PROLINE MUTANTS
Descriptor: HUMAN LYSOZYME
Authors:Inaka, K, Matsushima, M, Herning, T, Kuroki, R, Yutani, K, Kikuchi, M.
Deposit date:1992-03-27
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Role of proline residues in human lysozyme stability: a scanning calorimetric study combined with X-ray structure analysis of proline mutants.
Biochemistry, 31, 1992
4H53
DownloadVisualize
BU of 4h53 by Molmil
Influenza N2-Tyr406Asp neuraminidase in complex with beta-Neu5Ac
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Vavricka, C.J, Liu, Y, Kiyota, H, Sriwilaijaroen, N, Qi, J, Tanaka, K, Wu, Y, Li, Q, Li, Y, Yan, J, Suzuki, Y, Gao, G.F.
Deposit date:2012-09-18
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Influenza neuraminidase operates via a nucleophilic mechanism and can be targeted by covalent inhibitors
Nat Commun, 4, 2013
7CP7
DownloadVisualize
BU of 7cp7 by Molmil
Crystal structure of FqzB, native proteins
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase
Authors:Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
Deposit date:2020-08-06
Release date:2020-12-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis.
Biochemistry, 59, 2020

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon