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PDB: 1079 件

1MBQ
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Anionic Trypsin from Pacific Chum Salmon
分子名称: BENZAMIDINE, CALCIUM ION, Trypsin
著者Toyota, E, Ng, K.K.S, Kuninaga, S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2002-08-03
公開日2002-12-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure and Nucleotide Sequence of an Anionic Trypsin from Chum Salmon (Oncorhynchus keta) in Comparison with Atlantic Salmon (Salmo salar) and Bovine Trypsin
J.Mol.Biol., 324, 2002
1LZE
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DISSECTION OF PROTEIN-CARBOHYDRATE INTERACTIONS IN MUTANT HEN EGG-WHITE LYSOZYME COMPLEXES AND THEIR HYDROLYTIC ACTIVITY
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEN EGG WHITE LYSOZYME
著者Maenaka, K, Matsushima, M, Song, H, Watanabe, K, Kumagai, I.
登録日1995-02-10
公開日1995-05-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Dissection of protein-carbohydrate interactions in mutant hen egg-white lysozyme complexes and their hydrolytic activity.
J.Mol.Biol., 247, 1995
1LZC
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DISSECTION OF PROTEIN-CARBOHYDRATE INTERACTIONS IN MUTANT HEN EGG-WHITE LYSOZYME COMPLEXES AND THEIR HYDROLYTIC ACTIVITY
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEN EGG WHITE LYSOZYME
著者Maenaka, K, Matsushima, M, Song, H, Watanabe, K, Kumagai, I.
登録日1995-02-10
公開日1995-05-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Dissection of protein-carbohydrate interactions in mutant hen egg-white lysozyme complexes and their hydrolytic activity.
J.Mol.Biol., 247, 1995
1LZA
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DISSECTION OF PROTEIN-CARBOHYDRATE INTERACTIONS IN MUTANT HEN EGG-WHITE LYSOZYME COMPLEXES AND THEIR HYDROLYTIC ACTIVITY
分子名称: HEN EGG WHITE LYSOZYME
著者Maenaka, K, Matsushima, M, Song, H, Watanabe, K, Kumagai, I.
登録日1995-02-10
公開日1995-05-08
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Dissection of protein-carbohydrate interactions in mutant hen egg-white lysozyme complexes and their hydrolytic activity.
J.Mol.Biol., 247, 1995
1LZD
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DISSECTION OF PROTEIN-CARBOHYDRATE INTERACTIONS IN MUTANT HEN EGG-WHITE LYSOZYME COMPLEXES AND THEIR HYDROLYTIC ACTIVITY
分子名称: HEN EGG WHITE LYSOZYME
著者Maenaka, K, Matsushima, M, Song, H, Watanabe, K, Kumagai, I.
登録日1995-02-10
公開日1995-05-08
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Dissection of protein-carbohydrate interactions in mutant hen egg-white lysozyme complexes and their hydrolytic activity.
J.Mol.Biol., 247, 1995
1LZB
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DISSECTION OF PROTEIN-CARBOHYDRATE INTERACTIONS IN MUTANT HEN EGG-WHITE LYSOZYME COMPLEXES AND THEIR HYDROLYTIC ACTIVITY
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HEN EGG WHITE LYSOZYME
著者Maenaka, K, Matsushima, M, Song, H, Watanabe, K, Kumagai, I.
登録日1995-02-10
公開日1995-05-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Dissection of protein-carbohydrate interactions in mutant hen egg-white lysozyme complexes and their hydrolytic activity.
J.Mol.Biol., 247, 1995
6KBC
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Crystal structure of CghA with Sch210972
分子名称: (2S)-3-[(2S,4E)-4-[[(1R,2S,4aR,6S,8R,8aS)-2-[(E)-but-2-en-2-yl]-6,8-dimethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalen-1-yl]-oxidanyl-methylidene]-3,5-bis(oxidanylidene)pyrrolidin-2-yl]-2-methyl-2-oxidanyl-propanoic acid, CghA
著者Hara, K, Hashimoto, H, Maeda, N, Sato, M, Watanabe, K.
登録日2019-06-24
公開日2020-06-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Catalytic mechanism and endo-to-exo selectivity reversion of an octalin-forming natural Diels-Alderase
Nat Catal, 2021
6KKA
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Xylanase J mutant from Bacillus sp. 41M-1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
著者Suzuki, M, Takita, T, Nakatani, K.
登録日2019-07-24
公開日2019-09-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Increase in the thermostability of GH11 xylanase XynJ from Bacillus sp. strain 41M-1 using site saturation mutagenesis.
Enzyme.Microb.Technol., 130, 2019
5GV1
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Crystal structure of ENZbleach xylanase wild type
分子名称: Endo-1,4-beta-xylanase
著者Chitnumsub, P, Jaruwat, A, Boonyapakorn, K, Noytanom, K.
登録日2016-09-01
公開日2017-08-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-based protein engineering for thermostable and alkaliphilic enhancement of endo-beta-1,4-xylanase for applications in pulp bleaching
J. Biotechnol., 259, 2017
6L9C
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Neutron structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4
分子名称: COPPER (II) ION, Phenylethylamine oxidase, SODIUM ION
著者Murakawa, T, Kurihara, K, Shoji, M, Shibazaki, C, Sunami, T, Tamada, T, Yano, N, Yamada, T, Kusaka, K, Suzuki, M, Shigeta, Y, Kuroki, R, Hayashi, H, Yano, Y, Tanizawa, K, Adachi, M, Okajima, T.
登録日2019-11-08
公開日2020-04-29
最終更新日2023-11-22
実験手法NEUTRON DIFFRACTION (1.14 Å), X-RAY DIFFRACTION
主引用文献Neutron crystallography of copper amine oxidase reveals keto/enolate interconversion of the quinone cofactor and unusual proton sharing.
Proc.Natl.Acad.Sci.USA, 117, 2020
4UX2
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Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. MgF)
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Fujiyoshi, Y.
登録日2014-08-18
公開日2014-09-17
最終更新日2014-11-12
実験手法ELECTRON CRYSTALLOGRAPHY (7 Å)
主引用文献Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
4UX1
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Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. AlF)
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Fujiyoshi, Y.
登録日2014-08-18
公開日2014-09-17
最終更新日2014-11-12
実験手法ELECTRON CRYSTALLOGRAPHY (8 Å)
主引用文献Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
6KFF
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Undocked INX-6 hemichannel in a nanodisc
分子名称: Innexin-6
著者Burendei, B, Shinozaki, R, Watanabe, M, Terada, T, Tani, K, Fujiyoshi, Y, Oshima, A.
登録日2019-07-07
公開日2020-02-12
最終更新日2020-03-11
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structures of undocked innexin-6 hemichannels in phospholipids.
Sci Adv, 6, 2020
6KFH
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Undocked hemichannel of an N-terminal deletion mutant of INX-6 in a nanodisc
分子名称: Innexin-6
著者Burendei, B, Shinozaki, R, Watanabe, M, Terada, T, Tani, K, Fujiyoshi, Y, Oshima, A.
登録日2019-07-07
公開日2020-02-12
最終更新日2020-03-11
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structures of undocked innexin-6 hemichannels in phospholipids.
Sci Adv, 6, 2020
6KJI
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Crystal structure of PsoF with SAH
分子名称: Dual-functional monooxygenase/methyltransferase psoF, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
著者Hara, K, Hashimoto, H, Matsushita, T, Tsunematsu, Y, Watanabe, K.
登録日2019-07-22
公開日2019-09-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Functional and Structural Analyses oftrans C-Methyltransferase in Fungal Polyketide Biosynthesis.
Biochemistry, 58, 2019
3KDQ
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Crystal structure of a functionally unknown conserved protein from Corynebacterium diphtheriae.
分子名称: uncharacterized conserved protein
著者Zhang, R, Wu, R, Tan, K, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-10-23
公開日2009-11-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of a functionally unknown conserved protein from Corynebacterium diphtheriae.
To be Published
5H1R
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C. elegans INX-6 gap junction channel
分子名称: Innexin-6
著者Oshima, A, Tani, K, Fujiyoshi, Y.
登録日2016-10-11
公開日2016-12-07
最終更新日2017-02-01
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Atomic structure of the innexin-6 gap junction channel determined by cryo-EM
Nat Commun, 7, 2016
7CP6
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Crystal structure of FqzB
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase, ...
著者Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
登録日2020-08-06
公開日2020-12-30
最終更新日2021-01-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis.
Biochemistry, 59, 2020
6KJG
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Crystal structure of PsoF
分子名称: Dual-functional monooxygenase/methyltransferase psoF
著者Hara, K, Hashimoto, H, Matsushita, T, Tsunematsu, Y, Watanabe, K.
登録日2019-07-22
公開日2019-09-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Functional and Structural Analyses oftrans C-Methyltransferase in Fungal Polyketide Biosynthesis.
Biochemistry, 58, 2019
5SWD
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Structure of the adenine riboswitch aptamer domain in an intermediate-bound state
分子名称: ADENINE, MAGNESIUM ION, Vibrio vulnificus strain 93U204 chromosome II, ...
著者Stagno, J.R, Wang, Y.-X, Liu, Y, Bhandari, Y.R, Conrad, C.E, Nelson, G, Li, C, Wendel, D.R, White, T.A, Barty, A, Tuckey, R.A, Zatsepin, N.A, Grant, T.D, Fromme, P, Tan, K, Ji, X, Spence, J.C.H.
登録日2016-08-08
公開日2016-11-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
5SWE
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Ligand-bound structure of adenine riboswitch aptamer domain converted in crystal from its ligand-free state using ligand mixing serial femtosecond crystallography
分子名称: ADENINE, Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain
著者Stagno, J.R, Wang, Y.-X, Liu, Y, Bhandari, Y.R, Conrad, C.E, Nelson, G, Li, C, Wendel, D.R, White, T.A, Barty, A, Tuckey, R.A, Zatsepin, N.A, Grant, T.D, Fromme, P, Tan, K, Ji, X, Spence, J.C.H.
登録日2016-08-08
公開日2016-11-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
5UJY
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The structure of Mycobacterium tuberculosis topoisomerase I from the 2nd crystal form
分子名称: DNA topoisomerase 1
著者Cao, N, Tan, K, Tse-Dinh, Y.C.
登録日2017-01-19
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Investigating mycobacterial topoisomerase I mechanism from the analysis of metal and DNA substrate interactions at the active site.
Nucleic Acids Res., 46, 2018
5UJ1
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Crystal structure of Mycobacterium tuberculosis Topoisomerase I at 2.15A resolution limit
分子名称: DNA topoisomerase 1, SULFATE ION
著者Cao, N, Tan, K, Tse-Dinh, Y.C.
登録日2017-01-16
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.153 Å)
主引用文献Investigating mycobacterial topoisomerase I mechanism from the analysis of metal and DNA substrate interactions at the active site.
Nucleic Acids Res., 46, 2018
3OOS
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The structure of an alpha/beta fold family hydrolase from Bacillus anthracis str. Sterne
分子名称: Alpha/beta hydrolase family protein, GLYCEROL, SULFATE ION, ...
著者Fan, Y, Tan, K, Bigelow, L, Hamilton, J, Li, H, Zhou, Y, Clancy, S, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-08-31
公開日2010-11-10
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The structure of an alpha/beta fold family hydrolase from Bacillus anthracis str. Sterne
To be Published
7CP7
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Crystal structure of FqzB, native proteins
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, IODIDE ION, MAK1-like monooxygenase
著者Hara, K, Hashimoto, H, Matsushita, T, Kishimoto, S, Watanabe, K.
登録日2020-08-06
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and Functional Analyses of a Spiro-Carbon-Forming, Highly Promiscuous Epoxidase from Fungal Natural Product Biosynthesis.
Biochemistry, 59, 2020

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