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PDB: 404 件

7O8B
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Structure of haloalkane dehalogenase variant DhaA80 from Rhodococcus rhodochrous
分子名称: Haloalkane dehalogenase, methyl sulfate
著者Shaposhnikova, A, Prudnikova, T, Kuta Smatanova, I.
登録日2021-04-15
公開日2021-09-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids
Crystals, 11, 2021
2ZOS
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Crystal structure of mannosyl-3-phosphoglycerate phosphatase from Pyrococcus horikoshii
分子名称: Mannosyl-3-phosphoglycerate phosphatase
著者Kawamura, T, Watanabe, N, Tanaka, I.
登録日2008-06-05
公開日2009-01-27
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of mannosyl-3-phosphoglycerate phosphatase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
2ZOY
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The multi-drug binding transcriptional repressor CgmR (CGL2612 protein) from C.glutamicum
分子名称: GLYCEROL, Transcriptional regulator
著者Itou, H, Yao, M, Watanabe, N, Tanaka, I.
登録日2008-06-20
公開日2008-07-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The CGL2612 protein from Corynebacterium glutamicum is a drug resistance-related transcriptional repressor: structural and functional analysis of a newly identified transcription factor from genomic DNA analysis
J.Biol.Chem., 280, 2005
2ZB9
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Crystal structure of TetR family transcription regulator SCO0332
分子名称: Putative transcriptional regulator
著者Okada, U, Kondo, K, Watanabe, N, Yao, M, Tanaka, I.
登録日2007-10-16
公開日2008-01-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and functional analysis of the TetR-family transcriptional regulator SCO0332 from Streptomyces coelicolor
ACTA CRYSTALLOGR.,SECT.D, 64, 2008
2ZU9
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Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
分子名称: COBALT (II) ION, GUANOSINE-5'-DIPHOSPHATE, Mannosyl-3-phosphoglycerate synthase
著者Kawamura, T, Watanabe, N, Tanaka, I.
登録日2008-10-14
公開日2009-10-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
To be Published
1J0E
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ACC deaminase mutant reacton intermediate
分子名称: 1-AMINOCYCLOPROPANECARBOXYLIC ACID, 1-aminocyclopropane-1-carboxylate deaminase, PYRIDOXAL-5'-PHOSPHATE
著者Ose, T, Fujino, A, Yao, M, Honma, M, Tanaka, I.
登録日2002-11-12
公開日2003-05-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Reaction intermediate structures of 1-aminocyclopropane-1-carboxylate deaminase: insight into PLP-dependent cyclopropane ring-opening reaction
J.BIOL.CHEM., 278, 2003
2ZU8
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Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
分子名称: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, Mannosyl-3-phosphoglycerate synthase
著者Kawamura, T, Watanabe, N, Tanaka, I.
登録日2008-10-14
公開日2009-10-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii
To be Published
1J3A
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Crystal structure of ribosomal protein L13 from Pyrococcus horikoshii
分子名称: 50S ribosomal protein L13P
著者Nakashima, T, Tanaka, M, Kazama, T, Kawamura, S, Kimura, M, Yao, M, Tanaka, I.
登録日2003-01-21
公開日2003-02-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of ribosomal protein L13 from hyperthermophilic archaeon Pyrococcus horikoshii
To be Published
7AVR
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The tetrameric structure of haloalkane dehalogenase DpaA from Paraglaciecola agarilytica NO2
分子名称: CHLORIDE ION, Haloalkane dehalogenase 1
著者Mazur, A, Kolenko, P, Prudnikova, T, Grinkevich, P, Kuta Smatanova, I.
登録日2020-11-05
公開日2021-03-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The tetrameric structure of the novel haloalkane dehalogenase DpaA from Paraglaciecola agarilytica NO2.
Acta Crystallogr D Struct Biol, 77, 2021
3IS1
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Crystal structure of functional region of UafA from Staphylococcus saprophyticus in C2 form at 2.45 angstrom resolution
分子名称: GLYCEROL, Uro-adherence factor A
著者Tanaka, Y, Matsuoka, E, Shouji, Y, Kuroda, M, Tanaka, I, Yao, M.
登録日2009-08-24
公開日2010-09-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of the functional region of Uro-adherence factor A from Staphylococcus saprophyticus reveals participation of the B domain in ligand binding
Protein Sci., 20, 2011
3IS0
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Crystal structure of functional region of UafA from Staphylococcus saprophyticus in the presence of cholesterol
分子名称: GLYCEROL, Uro-adherence factor A
著者Tanaka, Y, Shouji, Y, Matsuoka, E, Kuroda, M, Tanaka, I, Yao, M.
登録日2009-08-24
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure of Functional Region of UafA from Staphylococcus saprophyticus
To be Published
3IRZ
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Crystal structure of functional region of UafA from Staphylococcus saprophyticus in P212121 form
分子名称: GLYCEROL, Uro-adherence factor A
著者Tanaka, Y, Shouji, Y, Matsuoka, E, Kuroda, M, Tanaka, I, Yao, M.
登録日2009-08-24
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the functional region of Uro-adherence factor A from Staphylococcus saprophyticus reveals participation of the B domain in ligand binding
Protein Sci., 20, 2011
1HUS
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RIBOSOMAL PROTEIN S7
分子名称: RIBOSOMAL PROTEIN S7
著者Hosaka, H, Nakagawa, A, Tanaka, I.
登録日1997-08-08
公開日1998-01-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ribosomal protein S7: a new RNA-binding motif with structural similarities to a DNA architectural factor.
Structure, 5, 1997
1J0B
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Crystal Structure Analysis of the ACC deaminase homologue complexed with inhibitor
分子名称: 1-aminocyclopropane-1-carboxylate deaminase, N-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-Y-LMETHYL]-1-AMINO-CYCLOPROPANECARBOXYLIC ACID
著者Fujino, A, Ose, T, Honma, M, Yao, M, Tanaka, I.
登録日2002-11-12
公開日2003-05-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and enzymatic properties of 1-aminocyclopropane-1-carboxylate deaminase homologue from Pyrococcus horikoshii
J.Mol.Biol., 341, 2004
1IU5
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X-ray Crystal Structure of the rubredoxin mutant from Pyrococcus Furiosus
分子名称: FE (III) ION, rubredoxin
著者Chatake, T, Kurihara, K, Tanaka, I, Tsyba, I, Bau, R, Jenney, F.E, Adams, M.W.W, Niimura, N.
登録日2002-02-27
公開日2002-08-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A neutron crystallographic analysis of a rubredoxin mutant at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
1IU6
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Neutron Crystal Structure of the rubredoxin mutant from Pyrococcus Furiosus
分子名称: FE (III) ION, rubredoxin
著者Chatake, T, Kurihara, K, Tanaka, I, Tsyba, I, Bau, R, Jenney, F.E, Adams, M.W.W, Niimura, N.
登録日2002-02-27
公開日2002-08-27
最終更新日2023-12-27
実験手法NEUTRON DIFFRACTION (1.6 Å)
主引用文献A neutron crystallographic analysis of a rubredoxin mutant at 1.6 A resolution.
Acta Crystallogr.,Sect.D, 60, 2004
1VBF
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BU of 1vbf by Molmil
Crystal structure of protein L-isoaspartate O-methyltransferase homologue from Sulfolobus tokodaii
分子名称: 231aa long hypothetical protein-L-isoaspartate O-methyltransferase
著者Tanaka, Y, Tsumoto, K, Yasutake, Y, Umetsu, M, Yao, M, Tanaka, I, Fukada, H, Kumagai, I.
登録日2004-02-25
公開日2004-08-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献How Oligomerization Contributes to the Thermostability of an Archaeon Protein: PROTEIN L-ISOASPARTYL-O-METHYLTRANSFERASE FROM SULFOLOBUS TOKODAII
J.Biol.Chem., 279, 2004
4WJ3
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Crystal structure of the asparagine transamidosome from Pseudomonas aeruginosa
分子名称: 76mer-tRNA, Aspartate--tRNA(Asp/Asn) ligase, Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, ...
著者Suzuki, T, Nakamura, A, Kato, K, Tanaka, I, Yao, M.
登録日2014-09-29
公開日2014-12-31
最終更新日2020-02-05
実験手法X-RAY DIFFRACTION (3.705 Å)
主引用文献Structure of the Pseudomonas aeruginosa transamidosome reveals unique aspects of bacterial tRNA-dependent asparagine biosynthesis
Proc.Natl.Acad.Sci.USA, 112, 2015
1J0C
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ACC deaminase mutated to catalytic residue
分子名称: 1-aminocyclopropane-1-carboxylate deaminase, PYRIDOXAL-5'-PHOSPHATE
著者Ose, T, Fujino, A, Yao, M, Honma, M, Tanaka, I.
登録日2002-11-12
公開日2003-05-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Reaction intermediate structures of 1-aminocyclopropane-1-carboxylate deaminase: insight into PLP-dependent cyclopropane ring-opening reaction
J.BIOL.CHEM., 278, 2003
4XJX
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STRUCTURE OF MUTANT (E165H) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, HsdR, MAGNESIUM ION
著者Baikova, T, Stsiapanava, A, Moche, M, Degtjarik, O, Kuta-Smatanova, I, Ettrich, R.
登録日2015-01-09
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献STRUCTURE OF MUTANT (E165H) OF THE HSDR SUBUNIT OF THE ECOR124I RESTRICTION ENZYME IN COMPLEX WITH ATP
To Be Published
1WSC
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Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii
分子名称: Hypothetical protein ST0229
著者Murayama, T, Tanaka, Y, Sasaki, T, Yasutake, Y, Yao, M, Tsumoto, K, Tanaka, I, Kumagai, I.
登録日2004-11-05
公開日2005-11-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of ST0229, function unknown protein from Sulfolobus tokodaii
To be Published
1J0A
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Crystal Structure Analysis of the ACC deaminase homologue
分子名称: 1-aminocyclopropane-1-carboxylate deaminase, ISOPROPYL ALCOHOL, PYRIDOXAL-5'-PHOSPHATE, ...
著者Fujino, A, Ose, T, Honma, M, Yao, M, Tanaka, I.
登録日2002-11-12
公開日2003-05-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and enzymatic properties of 1-aminocyclopropane-1-carboxylate deaminase homologue from Pyrococcus horikoshii
J.Mol.Biol., 341, 2004
1WOZ
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Crystal structure of uncharacterized protein ST1454 from Sulfolobus tokodaii
分子名称: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, 177aa long conserved hypothetical protein (ST1454)
著者Sasaki, T, Tanaka, Y, Yasutake, Y, Yao, M, Tanaka, I, Tsumoto, K, Kumagai, I.
登録日2004-08-27
公開日2005-10-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of the uncharacterized protein ST1454 from Sulfolobus tokodaii.
To be Published
7B2T
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Crystal structure of Iripin-5 serpin from Ixodes ricinus
分子名称: CHLORIDE ION, MAGNESIUM ION, Serpin-4 precursor, ...
著者Kascakova, B, Kuta Smatanova, I.
登録日2020-11-27
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and biochemical characterization of the novel serpin Iripin-5 from Ixodes ricinus.
Acta Crystallogr D Struct Biol, 77, 2021
6F9O
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Crystal structure of cold-adapted haloalkane dehalogenase DpcA from Psychrobacter cryohalolentis K5
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Haloalkane dehalogenase, ...
著者Tratsiak, K, Prudnikova, T, Drienovska, I, Damborsky, J, Brynda, J, Pachl, P, Kuty, M, Chaloupkova, R, Kuta Smatanova, I, Rezacova, P.
登録日2017-12-15
公開日2019-02-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Crystal structure of the cold-adapted haloalkane dehalogenase DpcA from Psychrobacter cryohalolentis K5.
Acta Crystallogr.,Sect.F, 75, 2019

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