8GT3
 
 | | Crystal structure of human cardiac alpha actin P109A mutant (ADP-Pi state) in complex with fragmin F1 domain | | Descriptor: | 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ... | | Authors: | Iwasa, M, Oda, T, Takeda, S. | | Deposit date: | 2022-09-07 | | Release date: | 2023-03-08 | | Last modified: | 2023-11-29 | | Method: | X-RAY DIFFRACTION (1.5 Å) | | Cite: | Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis.
Front Cell Dev Biol, 11, 2023
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2BEC
 | | Crystal structure of CHP2 in complex with its binding region in NHE1 and insights into the mechanism of pH regulation | | Descriptor: | Calcineurin B homologous protein 2, Sodium/hydrogen exchanger 1, YTTRIUM (III) ION | | Authors: | Ben Ammar, Y, Takeda, S, Hisamitsu, T, Mori, H, Wakabayashi, S. | | Deposit date: | 2005-10-24 | | Release date: | 2006-06-27 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | Crystal structure of CHP2 complexed with NHE1-cytosolic region and an implication for pH regulation
Embo J., 25, 2006
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3S9A
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3SBK
 | | Russell's viper venom serine proteinase, RVV-V (PPACK-bound form) | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Vipera russelli proteinase RVV-V gamma | | Authors: | Nakayama, D, Ben Ammar, Y, Takeda, S. | | Deposit date: | 2011-06-05 | | Release date: | 2011-09-07 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.55 Å) | | Cite: | Structural basis of coagulation factor V recognition for cleavage by RVV-V
Febs Lett., 585, 2011
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3S9C
 | | Russell's viper venom serine proteinase, RVV-V in complex with the fragment (residues 1533-1546) of human factor V | | Descriptor: | ACETATE ION, Coagulation factor V, Vipera russelli proteinase RVV-V gamma, ... | | Authors: | Nakayama, D, Ben Ammar, Y, Takeda, S. | | Deposit date: | 2011-06-01 | | Release date: | 2011-09-07 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Structural basis of coagulation factor V recognition for cleavage by RVV-V
Febs Lett., 585, 2011
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3S9B
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3VN4
 | | Crystal structure of the exosite-containing fragment of human ADAMTS13 (P475S mutant) | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A disintegrin and metalloproteinase with thrombospondin motifs 13, ... | | Authors: | Nakayama, D, Akiyama, M, Takeda, S, Kokame, K, Takagi, J, Miyata, T. | | Deposit date: | 2011-12-21 | | Release date: | 2012-12-26 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Structural analysis and biochemical studies of ADAMTS13 P475S mutant
To be Published
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1WRU
 | | Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu | | Descriptor: | 43 kDa tail protein | | Authors: | Kondou, Y, Kitazawa, D, Takeda, S, Yamashita, E, Mizuguchi, M, Kawano, K, Tsukihara, T. | | Deposit date: | 2004-10-27 | | Release date: | 2005-09-20 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu
To be Published
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1X03
 | | Crystal structure of endophilin BAR domain | | Descriptor: | SH3-containing GRB2-like protein 2 | | Authors: | Masuda, M, Takeda, S, Sone, M, Kamioka, Y, Mori, H, Mochizuki, N. | | Deposit date: | 2005-03-14 | | Release date: | 2006-05-02 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms
Embo J., 25, 2006
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1X04
 | | Crystal structure of endophilin BAR domain (mutant) | | Descriptor: | SH3-containing GRB2-like protein 2 | | Authors: | Masuda, M, Takeda, S, Sone, M, Kamioka, Y, Mori, H, Mochizuki, N. | | Deposit date: | 2005-03-14 | | Release date: | 2006-05-02 | | Last modified: | 2017-08-23 | | Method: | X-RAY DIFFRACTION (2.9 Å) | | Cite: | Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms
Embo J., 25, 2006
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2D4C
 | | Crystal structure of the endophilin BAR domain mutant | | Descriptor: | CALCIUM ION, SH3-containing GRB2-like protein 2 | | Authors: | Masuda, M, Takeda, S. | | Deposit date: | 2005-10-13 | | Release date: | 2006-07-11 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms
Embo J., 25, 2006
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2E3X
 | | Crystal structure of Russell's viper venom metalloproteinase | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, ... | | Authors: | Igarashi, T, Takeda, S. | | Deposit date: | 2006-11-30 | | Release date: | 2007-12-11 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (2.91 Å) | | Cite: | Crystal structure of RVV-X: an example of evolutionary gain of specificity by ADAM proteinases.
Febs Lett., 581, 2007
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3VTN
 | | The crystal structure of the C-terminal domain of Mu phage central spike - Pt derivative for MAD | | Descriptor: | FE (III) ION, PLATINUM (II) ION, Protein gp45 | | Authors: | Harada, K, Yamashita, E, Nakagawa, A, Takeda, S. | | Deposit date: | 2012-06-01 | | Release date: | 2013-02-06 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion
Biochim.Biophys.Acta, 1834, 2013
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3ABE
 | | Structure of human REV7 in complex with a human REV3 fragment in a tetragonal crystal | | Descriptor: | DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B | | Authors: | Hara, K, Hashimoto, H, Murakumo, Y, Kobayashi, S, Kogame, T, Unzai, S, Akashi, S, Takeda, S, Shimizu, T, Sato, M. | | Deposit date: | 2009-12-07 | | Release date: | 2010-02-16 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.6 Å) | | Cite: | Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase {zeta} and REV1
J.Biol.Chem., 285, 2010
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3ABD
 | | Structure of human REV7 in complex with a human REV3 fragment in a monoclinic crystal | | Descriptor: | DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B | | Authors: | Hara, K, Hashimoto, H, Murakumo, Y, Kobayashi, S, Kogame, T, Unzai, S, Akashi, S, Takeda, S, Shimizu, T, Sato, M. | | Deposit date: | 2009-12-07 | | Release date: | 2010-02-16 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase {zeta} and REV1
J.Biol.Chem., 285, 2010
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