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PDB: 65 件

8GT3
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BU of 8gt3 by Molmil
Crystal structure of human cardiac alpha actin P109A mutant (ADP-Pi state) in complex with fragmin F1 domain
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
著者Iwasa, M, Oda, T, Takeda, S.
登録日2022-09-07
公開日2023-03-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis.
Front Cell Dev Biol, 11, 2023
2BEC
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BU of 2bec by Molmil
Crystal structure of CHP2 in complex with its binding region in NHE1 and insights into the mechanism of pH regulation
分子名称: Calcineurin B homologous protein 2, Sodium/hydrogen exchanger 1, YTTRIUM (III) ION
著者Ben Ammar, Y, Takeda, S, Hisamitsu, T, Mori, H, Wakabayashi, S.
登録日2005-10-24
公開日2006-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of CHP2 complexed with NHE1-cytosolic region and an implication for pH regulation
Embo J., 25, 2006
3S9A
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BU of 3s9a by Molmil
Russell's viper venom serine proteinase, RVV-V (closed-form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Vipera russelli proteinase RVV-V gamma
著者Nakayama, D, Ben Ammar, Y, Takeda, S.
登録日2011-06-01
公開日2011-09-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of coagulation factor V recognition for cleavage by RVV-V
Febs Lett., 585, 2011
3SBK
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BU of 3sbk by Molmil
Russell's viper venom serine proteinase, RVV-V (PPACK-bound form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Vipera russelli proteinase RVV-V gamma
著者Nakayama, D, Ben Ammar, Y, Takeda, S.
登録日2011-06-05
公開日2011-09-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis of coagulation factor V recognition for cleavage by RVV-V
Febs Lett., 585, 2011
3S9C
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BU of 3s9c by Molmil
Russell's viper venom serine proteinase, RVV-V in complex with the fragment (residues 1533-1546) of human factor V
分子名称: ACETATE ION, Coagulation factor V, Vipera russelli proteinase RVV-V gamma, ...
著者Nakayama, D, Ben Ammar, Y, Takeda, S.
登録日2011-06-01
公開日2011-09-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of coagulation factor V recognition for cleavage by RVV-V
Febs Lett., 585, 2011
3S9B
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BU of 3s9b by Molmil
Russell's viper venom serine proteinase, RVV-V (open-form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Vipera russelli proteinase RVV-V gamma
著者Nakayama, D, Ben Ammar, Y, Takeda, S.
登録日2011-06-01
公開日2011-09-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of coagulation factor V recognition for cleavage by RVV-V
Febs Lett., 585, 2011
3VN4
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BU of 3vn4 by Molmil
Crystal structure of the exosite-containing fragment of human ADAMTS13 (P475S mutant)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A disintegrin and metalloproteinase with thrombospondin motifs 13, ...
著者Nakayama, D, Akiyama, M, Takeda, S, Kokame, K, Takagi, J, Miyata, T.
登録日2011-12-21
公開日2012-12-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural analysis and biochemical studies of ADAMTS13 P475S mutant
To be Published
1WRU
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BU of 1wru by Molmil
Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu
分子名称: 43 kDa tail protein
著者Kondou, Y, Kitazawa, D, Takeda, S, Yamashita, E, Mizuguchi, M, Kawano, K, Tsukihara, T.
登録日2004-10-27
公開日2005-09-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu
To be Published
1X03
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BU of 1x03 by Molmil
Crystal structure of endophilin BAR domain
分子名称: SH3-containing GRB2-like protein 2
著者Masuda, M, Takeda, S, Sone, M, Kamioka, Y, Mori, H, Mochizuki, N.
登録日2005-03-14
公開日2006-05-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms
Embo J., 25, 2006
1X04
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BU of 1x04 by Molmil
Crystal structure of endophilin BAR domain (mutant)
分子名称: SH3-containing GRB2-like protein 2
著者Masuda, M, Takeda, S, Sone, M, Kamioka, Y, Mori, H, Mochizuki, N.
登録日2005-03-14
公開日2006-05-02
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms
Embo J., 25, 2006
2D4C
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BU of 2d4c by Molmil
Crystal structure of the endophilin BAR domain mutant
分子名称: CALCIUM ION, SH3-containing GRB2-like protein 2
著者Masuda, M, Takeda, S.
登録日2005-10-13
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms
Embo J., 25, 2006
2E3X
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BU of 2e3x by Molmil
Crystal structure of Russell's viper venom metalloproteinase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, ...
著者Igarashi, T, Takeda, S.
登録日2006-11-30
公開日2007-12-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Crystal structure of RVV-X: an example of evolutionary gain of specificity by ADAM proteinases.
Febs Lett., 581, 2007
3VTN
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BU of 3vtn by Molmil
The crystal structure of the C-terminal domain of Mu phage central spike - Pt derivative for MAD
分子名称: FE (III) ION, PLATINUM (II) ION, Protein gp45
著者Harada, K, Yamashita, E, Nakagawa, A, Takeda, S.
登録日2012-06-01
公開日2013-02-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion
Biochim.Biophys.Acta, 1834, 2013
3ABE
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BU of 3abe by Molmil
Structure of human REV7 in complex with a human REV3 fragment in a tetragonal crystal
分子名称: DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B
著者Hara, K, Hashimoto, H, Murakumo, Y, Kobayashi, S, Kogame, T, Unzai, S, Akashi, S, Takeda, S, Shimizu, T, Sato, M.
登録日2009-12-07
公開日2010-02-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase {zeta} and REV1
J.Biol.Chem., 285, 2010
3ABD
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BU of 3abd by Molmil
Structure of human REV7 in complex with a human REV3 fragment in a monoclinic crystal
分子名称: DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B
著者Hara, K, Hashimoto, H, Murakumo, Y, Kobayashi, S, Kogame, T, Unzai, S, Akashi, S, Takeda, S, Shimizu, T, Sato, M.
登録日2009-12-07
公開日2010-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase {zeta} and REV1
J.Biol.Chem., 285, 2010
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