3S9C
| Russell's viper venom serine proteinase, RVV-V in complex with the fragment (residues 1533-1546) of human factor V | Descriptor: | ACETATE ION, Coagulation factor V, Vipera russelli proteinase RVV-V gamma, ... | Authors: | Nakayama, D, Ben Ammar, Y, Takeda, S. | Deposit date: | 2011-06-01 | Release date: | 2011-09-07 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural basis of coagulation factor V recognition for cleavage by RVV-V Febs Lett., 585, 2011
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8JU3
| Mu phage tail fiber | Descriptor: | Tail fiber protein S,Tail fiber protein S' | Authors: | Yamashita, E, Takeda, S. | Deposit date: | 2023-06-24 | Release date: | 2024-02-28 | Last modified: | 2024-09-11 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Determination of the three-dimensional structure of bacteriophage Mu(-) tail fiber and its characterization. Virology, 593, 2024
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3SBK
| Russell's viper venom serine proteinase, RVV-V (PPACK-bound form) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, Vipera russelli proteinase RVV-V gamma | Authors: | Nakayama, D, Ben Ammar, Y, Takeda, S. | Deposit date: | 2011-06-05 | Release date: | 2011-09-07 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.55 Å) | Cite: | Structural basis of coagulation factor V recognition for cleavage by RVV-V Febs Lett., 585, 2011
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3S9B
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3S9A
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1WRU
| Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu | Descriptor: | 43 kDa tail protein | Authors: | Kondou, Y, Kitazawa, D, Takeda, S, Yamashita, E, Mizuguchi, M, Kawano, K, Tsukihara, T. | Deposit date: | 2004-10-27 | Release date: | 2005-09-20 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu To be Published
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3VN4
| Crystal structure of the exosite-containing fragment of human ADAMTS13 (P475S mutant) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A disintegrin and metalloproteinase with thrombospondin motifs 13, ... | Authors: | Nakayama, D, Akiyama, M, Takeda, S, Kokame, K, Takagi, J, Miyata, T. | Deposit date: | 2011-12-21 | Release date: | 2012-12-26 | Last modified: | 2024-07-31 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Crystal structure and enzymatic activity of an ADAMTS-13 mutant with the East Asian-specific P475S polymorphism. J.Thromb.Haemost., 11, 2013
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2D4C
| Crystal structure of the endophilin BAR domain mutant | Descriptor: | CALCIUM ION, SH3-containing GRB2-like protein 2 | Authors: | Masuda, M, Takeda, S. | Deposit date: | 2005-10-13 | Release date: | 2006-07-11 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms Embo J., 25, 2006
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2E3X
| Crystal structure of Russell's viper venom metalloproteinase | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, ... | Authors: | Igarashi, T, Takeda, S. | Deposit date: | 2006-11-30 | Release date: | 2007-12-11 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.91 Å) | Cite: | Crystal structure of RVV-X: an example of evolutionary gain of specificity by ADAM proteinases. Febs Lett., 581, 2007
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1X03
| Crystal structure of endophilin BAR domain | Descriptor: | SH3-containing GRB2-like protein 2 | Authors: | Masuda, M, Takeda, S, Sone, M, Kamioka, Y, Mori, H, Mochizuki, N. | Deposit date: | 2005-03-14 | Release date: | 2006-05-02 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms Embo J., 25, 2006
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1X04
| Crystal structure of endophilin BAR domain (mutant) | Descriptor: | SH3-containing GRB2-like protein 2 | Authors: | Masuda, M, Takeda, S, Sone, M, Kamioka, Y, Mori, H, Mochizuki, N. | Deposit date: | 2005-03-14 | Release date: | 2006-05-02 | Last modified: | 2017-08-23 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Endophilin BAR domain drives membrane curvature by two newly identified structure-based mechanisms Embo J., 25, 2006
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3VTO
| The crystal structure of the C-terminal domain of Mu phage central spike | Descriptor: | CALCIUM ION, CHLORIDE ION, FE (III) ION, ... | Authors: | Harada, K, Yamashita, E, Nakagawa, A, Takeda, S. | Deposit date: | 2012-06-01 | Release date: | 2013-02-06 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.44 Å) | Cite: | Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion Biochim.Biophys.Acta, 1834, 2013
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3VTN
| The crystal structure of the C-terminal domain of Mu phage central spike - Pt derivative for MAD | Descriptor: | FE (III) ION, PLATINUM (II) ION, Protein gp45 | Authors: | Harada, K, Yamashita, E, Nakagawa, A, Takeda, S. | Deposit date: | 2012-06-01 | Release date: | 2013-02-06 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Crystal structure of the C-terminal domain of Mu phage central spike and functions of bound calcium ion Biochim.Biophys.Acta, 1834, 2013
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3ABD
| Structure of human REV7 in complex with a human REV3 fragment in a monoclinic crystal | Descriptor: | DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B | Authors: | Hara, K, Hashimoto, H, Murakumo, Y, Kobayashi, S, Kogame, T, Unzai, S, Akashi, S, Takeda, S, Shimizu, T, Sato, M. | Deposit date: | 2009-12-07 | Release date: | 2010-02-16 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase {zeta} and REV1 J.Biol.Chem., 285, 2010
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3ABE
| Structure of human REV7 in complex with a human REV3 fragment in a tetragonal crystal | Descriptor: | DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B | Authors: | Hara, K, Hashimoto, H, Murakumo, Y, Kobayashi, S, Kogame, T, Unzai, S, Akashi, S, Takeda, S, Shimizu, T, Sato, M. | Deposit date: | 2009-12-07 | Release date: | 2010-02-16 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase {zeta} and REV1 J.Biol.Chem., 285, 2010
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