2Z1I
| Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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2Z1J
| Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K/N143K/T145K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.38 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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2Z1H
| Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T92K/Q105K/Q113R/Q115K/N143K/T145K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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2Z8Z
| Crystal structure of a platinum-bound S445C mutant of Pseudomonas sp. MIS38 lipase | 分子名称: | CALCIUM ION, Lipase, PLATINUM (II) ION, ... | 著者 | Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-09-13 | 公開日 | 2007-10-30 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation FEBS Lett., 581, 2007
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2Z1G
| Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K) | 分子名称: | Ribonuclease HI | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-08 | 公開日 | 2007-11-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
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3AOV
| Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PLP | 分子名称: | PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207 | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2010-10-07 | 公開日 | 2011-10-12 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.72 Å) | 主引用文献 | Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine To be Published
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3ATH
| Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with four AKGs as substrates and allosteric effectors | 分子名称: | 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207 | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2011-01-05 | 公開日 | 2012-01-18 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.69 Å) | 主引用文献 | Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine To be Published
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3AV7
| Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PMP, KYN as substrates and KYA as products | 分子名称: | (2S)-2-amino-4-(2-aminophenyl)-4-oxobutanoic acid, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-hydroxyquinoline-2-carboxylic acid, ... | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2011-02-23 | 公開日 | 2012-03-07 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Structural insight into kynurenic acid excretion mechanisms of kynurenine aminotransferase in the hyperthermophilic archaeon Pyrococcus horikoshii To be Published
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3AOW
| Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with AKG | 分子名称: | 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207 | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2010-10-07 | 公開日 | 2011-10-12 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.56 Å) | 主引用文献 | Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine To be Published
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2Z8X
| Crystal structure of extracellular lipase from Pseudomonas sp. MIS38 | 分子名称: | CALCIUM ION, Lipase, ZINC ION | 著者 | Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-09-11 | 公開日 | 2007-10-30 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.48 Å) | 主引用文献 | Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation FEBS Lett., 581, 2007
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3AHP
| Crystal structure of stable protein, CutA1, from a psychrotrophic bacterium Shewanella sp. SIB1 | 分子名称: | CutA1 | 著者 | Tanaka, S, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2010-04-26 | 公開日 | 2011-01-05 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of stable protein CutA1 from psychrotrophic bacterium Shewanella sp. SIB1 J.SYNCHROTRON RADIAT., 18, 2011
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2Z57
| Crystal structure of G56E-propeptide:S324A-subtilisin complex | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-06-29 | 公開日 | 2008-01-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses J.Mol.Biol., 374, 2007
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2Z56
| Crystal structure of G56S-propeptide:S324A-subtilisin complex | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-06-29 | 公開日 | 2008-01-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses J.Mol.Biol., 374, 2007
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2Z30
| Crystal structure of complex form between mat-Tk-subtilisin and Tk-propeptide | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-29 | 公開日 | 2007-12-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2Z58
| Crystal structure of G56W-propeptide:S324A-subtilisin complex | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-06-29 | 公開日 | 2008-01-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.88 Å) | 主引用文献 | Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses J.Mol.Biol., 374, 2007
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2Z2X
| Crystal structure of mature form of Tk-subtilisin | 分子名称: | CALCIUM ION, Tk-subtilisin | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-29 | 公開日 | 2007-12-04 | 最終更新日 | 2023-11-15 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2ZF5
| Crystal Structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon | 分子名称: | Glycerol kinase | 著者 | Koga, Y, Katsumi, R, You, D.-J, Matsumura, H, Takano, K, Kanaya, S. | 登録日 | 2007-12-20 | 公開日 | 2008-05-06 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon in a dimeric form Febs J., 275, 2008
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2ZVD
| Crystal structure of Pseudomonas sp. MIS38 lipase in an open conformation | 分子名称: | CALCIUM ION, Lipase | 著者 | Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2008-11-05 | 公開日 | 2009-11-10 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids J.Mol.Biol., 2010
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3A3O
| Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the five C-terminal residues | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-06-15 | 公開日 | 2009-08-18 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
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3A70
| Crystal structure of Pseudomonas sp. MIS38 lipase in complex with diethyl phosphate | 分子名称: | ACETATE ION, CALCIUM ION, DIETHYL PHOSPHONATE, ... | 著者 | Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-09-10 | 公開日 | 2010-05-26 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids J.Mol.Biol., 2010
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3A3N
| Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the two C-terminal residues | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-06-15 | 公開日 | 2009-08-18 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin J.Mol.Biol., 394, 2009
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3A6Z
| Crystal structure of Pseudomonas sp. MIS38 lipase (PML) in the open conformation following dialysis against Ca-free buffer | 分子名称: | CALCIUM ION, Lipase | 著者 | Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2009-09-10 | 公開日 | 2010-05-26 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids J.Mol.Biol., 2010
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2Z2Y
| Crystal structure of autoprocessed form of Tk-subtilisin | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-29 | 公開日 | 2007-12-04 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.89 Å) | 主引用文献 | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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2ZRQ
| Crystal structure of S324A-subtilisin | 分子名称: | CALCIUM ION, Tk-subtilisin | 著者 | Tanaka, S, Takeuchi, Y, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2008-08-28 | 公開日 | 2009-03-03 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.16 Å) | 主引用文献 | Crystal structure of Tk-subtilisin folded without propeptide: requirement of propeptide for acceleration of folding Febs Lett., 582, 2008
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2Z2Z
| Crystal structure of unautoprocessed form of Tk-subtilisin soaked by 10mM CaCl2 | 分子名称: | CALCIUM ION, Tk-subtilisin precursor | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | 登録日 | 2007-05-29 | 公開日 | 2007-12-04 | 最終更新日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (1.87 Å) | 主引用文献 | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
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