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PDB: 907 results

4FHF
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BU of 4fhf by Molmil
Spore photoproduct lyase C140A mutant with dinucleoside spore photoproduct
Descriptor: 1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-[[(5R)-1-[(2R,4S,5R)-5-(hydroxymethyl)-4-oxidanyl-oxolan-2-yl]-5-methyl-2,4-bis(oxidanylidene)-1,3-diazinan-5-yl]methyl]pyrimidine-2,4-dione, IRON/SULFUR CLUSTER, PYROPHOSPHATE 2-, ...
Authors:Benjdia, A, Heil, K, Barends, T.R.M, Carell, T, Schlichting, I.
Deposit date:2012-06-06
Release date:2012-07-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into recognition and repair of UV-DNA damage by Spore Photoproduct Lyase, a radical SAM enzyme.
Nucleic Acids Res., 40, 2012
5CN8
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BU of 5cn8 by Molmil
Ultrafast dynamics in myoglobin: 0.3 ps time delay
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
Deposit date:2015-07-17
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
5CNF
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BU of 5cnf by Molmil
Ultrafast dynamics in myoglobin: 50 ps time delay
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
Deposit date:2015-07-17
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
5C6J
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BU of 5c6j by Molmil
Crystal Structure of Gadolinium derivative of HEWL solved using Free-Electron Laser radiation
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ...
Authors:Galli, L, Barends, T.R.M, Son, S.-K, White, T.A, Barty, A, Botha, S, Boutet, S, Caleman, C, Doak, R.B, Nanao, M.H, Nass, K, Shoeman, R.L, Timneanu, N, Santra, R, Schlichting, I, Chapman, H.N.
Deposit date:2015-06-23
Release date:2015-07-08
Last modified:2018-11-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Towards phasing using high X-ray intensity.
Iucrj, 2, 2015
4GVD
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BU of 4gvd by Molmil
Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with Syndecan1 Peptide
Descriptor: 5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID), CHLORIDE ION, SODIUM ION, ...
Authors:Liu, X, Shepherd, T.R, Murray, A.M, Xu, Z, Fuentes, E.J.
Deposit date:2012-08-30
Release date:2013-03-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics.
Structure, 21, 2013
4HB7
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BU of 4hb7 by Molmil
The Structure of Dihydropteroate Synthase from Staphylococcus aureus subsp. aureus Mu50.
Descriptor: 1,2-ETHANEDIOL, Dihydropteroate synthase
Authors:Cuff, M.E, Holowicki, J, Jedrzejczak, R, Terwilliger, T.C, Rubin, E.J, Guinn, K, Baker, D, Ioerger, T.R, Sacchettini, J.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2012-09-27
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Structure of Dihydropteroate Synthase from Staphylococcus aureus subsp. aureus Mu50.
TO BE PUBLISHED
4ZVD
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BU of 4zvd by Molmil
Crystal structure of MID domain of the E. coli DosC - form II
Descriptor: Diguanylate cyclase DosC
Authors:Tarnawski, M, Barends, T.R.M, Schlichting, I.
Deposit date:2015-05-18
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
4ZVH
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BU of 4zvh by Molmil
Crystal structure of GGDEF domain of the E. coli DosC - form IV
Descriptor: Diguanylate cyclase DosC, SULFATE ION
Authors:Tarnawski, M, Barends, T.R.M, Schlichting, I.
Deposit date:2015-05-18
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
4ZVE
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BU of 4zve by Molmil
Crystal structure of GGDEF domain of the E. coli DosC - form I (apo-form)
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Diguanylate cyclase DosC
Authors:Tarnawski, M, Barends, T.R.M, Schlichting, I.
Deposit date:2015-05-18
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
5CO6
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BU of 5co6 by Molmil
Crystal structure of human zinc insulin at pH 6.5
Descriptor: CHLORIDE ION, Insulin, MAGNESIUM ION, ...
Authors:Lima, L.M.T.R, PALMIERI, L.C.
Deposit date:2015-07-19
Release date:2015-08-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human zinc insulin at pH 6.5
To Be Published
5CN7
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BU of 5cn7 by Molmil
Ultrafast dynamics in myoglobin: 0.2 ps time delay
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
Deposit date:2015-07-17
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
4IKL
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BU of 4ikl by Molmil
Crystal structure of wild-type human transthyretin in complex with sulindac
Descriptor: Transthyretin, [(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid
Authors:Lima, L.M.T.R, Polikarpov, I.
Deposit date:2012-12-26
Release date:2013-01-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of wild-type human transthyretin in complex with sulindac
To be Published
5CNE
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BU of 5cne by Molmil
Ultrafast dynamics in myoglobin: 10 ps time delay
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
Deposit date:2015-07-17
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
4LJ4
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BU of 4lj4 by Molmil
ClpB NBD2 from T. thermophilus, nucleotide-free
Descriptor: Chaperone protein ClpB, PHOSPHATE ION
Authors:Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
Deposit date:2013-07-04
Release date:2014-02-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014
5C2V
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BU of 5c2v by Molmil
Kuenenia stuttgartiensis Hydrazine Synthase
Descriptor: CALCIUM ION, CHLORIDE ION, HEME C, ...
Authors:Dietl, A, Ferousi, C, Maalcke, W.J, Menzel, A, de Vries, S, Keltjens, J.T, Jetten, M.S.M, Kartal, B, Barends, T.R.M.
Deposit date:2015-06-16
Release date:2015-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The inner workings of the hydrazine synthase multiprotein complex.
Nature, 527, 2015
4LJ7
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BU of 4lj7 by Molmil
ClpB NBD2 K601Q from T. thermophilus in complex with MANT-dADP
Descriptor: 2'(3')-O-N-METHYLANTHRANILOYL-ADENOSINE-5'-DIPHOSPHATE, Chaperone protein ClpB, PHOSPHATE ION
Authors:Zeymer, C, Barends, T.R.M, Werbeck, N.D, Schlichting, I, Reinstein, J.
Deposit date:2013-07-04
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Elements in nucleotide sensing and hydrolysis of the AAA+ disaggregation machine ClpB: a structure-based mechanistic dissection of a molecular motor
Acta Crystallogr.,Sect.D, 70, 2014
5CN6
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BU of 5cn6 by Molmil
Ultrafast dynamics in myoglobin: 0.1 ps time delay
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
Deposit date:2015-07-17
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
5CO9
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BU of 5co9 by Molmil
Crystal structure of human zinc insulin at pH 6.5
Descriptor: CHLORIDE ION, Insulin, ZINC ION
Authors:Lima, L.M.T.R, Palmieri, L.C.
Deposit date:2015-07-20
Release date:2015-08-26
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of human zinc insulin at pH 6.5
To Be Published
4K1Y
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BU of 4k1y by Molmil
Crystal structure of Canavalia boliviana lectin in complex with Man1-3Man-OMe
Descriptor: CADMIUM ION, CALCIUM ION, Canavalia boliviana lectin, ...
Authors:Bezerra, G.A, Viertlmayr, R, Moura, T.R, Delatorre, P, Rocha, B.A.M, Cavada, B.S, Gruber, K.
Deposit date:2013-04-07
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Studies of an Anti-Inflammatory Lectin from Canavalia boliviana Seeds in Complex with Dimannosides.
Plos One, 9, 2014
4GVC
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BU of 4gvc by Molmil
Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with phosphorylated Syndecan1 Peptide
Descriptor: 5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID), CHLORIDE ION, SODIUM ION, ...
Authors:Liu, X, Shepherd, T.R, Murray, A.M, Xu, Z, Fuentes, E.J.
Deposit date:2012-08-30
Release date:2013-03-13
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:The structure of the Tiam1 PDZ domain/ phospho-syndecan1 complex reveals a ligand conformation that modulates protein dynamics.
Structure, 21, 2013
4N4O
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BU of 4n4o by Molmil
Nitrosomonas europea HAO soaked in NH2OH
Descriptor: DODECAETHYLENE GLYCOL, HEME C, HYDROXYAMINE, ...
Authors:Maalcke, W.J, Dietl, A, Marritt, S.J, Butt, J.N, Jetten, M.S.M, Keltjens, J.T, Barends, T.R.M.B, Kartal, B.
Deposit date:2013-10-08
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structural Basis of Biological NO Generation by Octaheme Oxidoreductases.
J.Biol.Chem., 289, 2014
4I6J
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BU of 4i6j by Molmil
A ubiquitin ligase-substrate complex
Descriptor: Cryptochrome-2, F-box/LRR-repeat protein 3, S-phase kinase-associated protein 1
Authors:Xing, W, Busino, L, Hinds, T.R, Marionni, S.T, Saifee, N.H, Bush, M.F, Pagano, M, Zheng, N.
Deposit date:2012-11-29
Release date:2013-03-13
Last modified:2013-05-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:SCFFBXL3 ubiquitin ligase targets cryptochromes at their cofactor pocket.
Nature, 496, 2013
5CNB
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BU of 5cnb by Molmil
Ultrafast dynamics in myoglobin: 0.5 ps time delay
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Barends, T.R.M, Foucar, L, Ardevol, A, Nass, K.J, Aquila, A, Botha, S, Doak, R.B, Falahati, K, Hartmann, E, Hilpert, M, Heinz, M, Hoffmann, M.C, Koefinger, J, Koglin, J, Kovacsova, G, Liang, M, Milathianaki, D, Lemke, H.T, Reinstein, J, Roome, C.M, Shoeman, R.L, Williams, G.J, Burghardt, I, Hummer, G, Boutet, S, Schlichting, I.
Deposit date:2015-07-17
Release date:2015-09-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Direct observation of ultrafast collective motions in CO myoglobin upon ligand dissociation.
Science, 350, 2015
4K20
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BU of 4k20 by Molmil
Crystal structure of Canavalia boliviana lectin
Descriptor: CALCIUM ION, Canavalia boliviana lectin, MANGANESE (II) ION
Authors:Viertlmayr, R, Bezerra, G.A, Moura, T.R, Delatorre, P, Rocha, B.A.M, Cavada, B.S, Gruber, K.
Deposit date:2013-04-07
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Studies of an Anti-Inflammatory Lectin from Canavalia boliviana Seeds in Complex with Dimannosides.
Plos One, 9, 2014
4K1Z
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BU of 4k1z by Molmil
Crystal structure of Canavalia boliviana lectin in complex with Man1-4Man-OMe
Descriptor: CADMIUM ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Bezerra, G.A, Viertlmayr, R, Moura, T.R, Delatorre, P, Rocha, B.A.M, Cavada, B.S, Gruber, K.
Deposit date:2013-04-07
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Studies of an Anti-Inflammatory Lectin from Canavalia boliviana Seeds in Complex with Dimannosides.
Plos One, 9, 2014

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