2E7E
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![BU of 2e7e by Molmil](/molmil-images/mine/2e7e) | |
1VGI
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![BU of 1vgi by Molmil](/molmil-images/mine/1vgi) | Crystal structure of xenon bound rat heme-heme oxygenase-1 complex | 分子名称: | FORMIC ACID, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE, ... | 著者 | Sugishima, M, Sakamoto, H, Noguchi, M, Fukuyama, K. | 登録日 | 2004-04-26 | 公開日 | 2004-08-31 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | CO-trapping site in heme oxygenase revealed by photolysis of its co-bound heme complex: mechanism of escaping from product inhibition J.Mol.Biol., 341, 2004
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2DY5
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![BU of 2dy5 by Molmil](/molmil-images/mine/2dy5) | Crystal structure of rat heme oxygenase-1 in complex with heme and 2-[2-(4-chlorophenyl)ethyl]-2-[(1H-imidazol-1-yl)methyl]-1,3-dioxolane | 分子名称: | 1-({2-[2-(4-CHLOROPHENYL)ETHYL]-1,3-DIOXOLAN-2-YL}METHYL)-1H-IMIDAZOLE, CHLORIDE ION, Heme oxygenase 1, ... | 著者 | Sugishima, M, Takahashi, H, Fukuyama, K. | 登録日 | 2006-09-06 | 公開日 | 2007-05-22 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | X-ray crystallographic and biochemical characterization of the inhibitory action of an imidazole-dioxolane compound on heme oxygenase Biochemistry, 46, 2007
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2ZXL
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![BU of 2zxl by Molmil](/molmil-images/mine/2zxl) | Crystal structure of red chlorophyll catabolite reductase from Arabidopsis thaliana | 分子名称: | Red chlorophyll catabolite reductase, chloroplastic, SODIUM ION, ... | 著者 | Sugishima, M, Kitamori, Y, Fukuyama, K. | 登録日 | 2008-12-29 | 公開日 | 2009-05-05 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structure of red chlorophyll catabolite reductase: enlargement of the ferredoxin-dependent bilin reductase family J.Mol.Biol., 389, 2009
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3AGA
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![BU of 3aga by Molmil](/molmil-images/mine/3aga) | Crystal structure of RCC-bound red chlorophyll catabolite reductase from Arabidopsis thaliana | 分子名称: | 3-{(2Z,3S,4S)-5-[(Z)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-2-[(5R)-2-[(3-ethyl-5-formyl-4-methyl-1H-pyrrol-2-yl)methyl]-5-(methoxycarbonyl)-3-methyl-4-oxo-4,5-dihydrocyclopenta[b]pyrrol-6(1H)-ylidene]-4-methyl-3,4-dihydro-2H-pyrrol-3-yl}propanoic acid, Red chlorophyll catabolite reductase, chloroplastic, ... | 著者 | Sugishima, M, Fukuyama, K. | 登録日 | 2010-03-30 | 公開日 | 2010-09-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structures of the substrate-bound forms of red chlorophyll catabolite reductase: implications for site-specific and stereospecific reaction J.Mol.Biol., 402, 2010
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3AGC
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![BU of 3agc by Molmil](/molmil-images/mine/3agc) | F218V mutant of the substrate-bound red chlorophyll catabolite reductase from Arabidopsis thaliana | 分子名称: | 3-{(2Z,3S,4S)-5-[(Z)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-2-[(5R)-2-[(3-ethyl-5-formyl-4-methyl-1H-pyrrol-2-yl)methyl]-5-(methoxycarbonyl)-3-methyl-4-oxo-4,5-dihydrocyclopenta[b]pyrrol-6(1H)-ylidene]-4-methyl-3,4-dihydro-2H-pyrrol-3-yl}propanoic acid, Red chlorophyll catabolite reductase, chloroplastic, ... | 著者 | Sugishima, M, Fukuyama, K. | 登録日 | 2010-03-30 | 公開日 | 2010-09-01 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structures of the substrate-bound forms of red chlorophyll catabolite reductase: implications for site-specific and stereospecific reaction J.Mol.Biol., 402, 2010
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2ZXK
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![BU of 2zxk by Molmil](/molmil-images/mine/2zxk) | |
3AGB
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![BU of 3agb by Molmil](/molmil-images/mine/3agb) | |
6J79
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![BU of 6j79 by Molmil](/molmil-images/mine/6j79) | |
6J7I
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![BU of 6j7i by Molmil](/molmil-images/mine/6j7i) | Fusion protein of heme oxygenase-1 and NADPH cytochrome P450 reductase (15aa) | 分子名称: | FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, Heme oxygenase 1,NADPH--cytochrome P450 reductase, ... | 著者 | Sugishima, M, Sato, H, Wada, K, Yamamoto, K. | 登録日 | 2019-01-18 | 公開日 | 2019-04-10 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | Crystal structure of a NADPH-cytochrome P450 oxidoreductase (CYPOR) and heme oxygenase 1 fusion protein implies a conformational change in CYPOR upon NADPH/NADP+binding. Febs Lett., 593, 2019
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6KME
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![BU of 6kme by Molmil](/molmil-images/mine/6kme) | Crystal structure of phytochromobilin synthase from tomato in complex with biliverdin | 分子名称: | BILIVERDINE IX ALPHA, CHLORIDE ION, MAGNESIUM ION, ... | 著者 | Sugishima, M, Wada, K, Fukuyama, K. | 登録日 | 2019-07-31 | 公開日 | 2019-12-18 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Crystal structure of phytochromobilin synthase in complex with biliverdin IX alpha , a key enzyme in the biosynthesis of phytochrome. J.Biol.Chem., 295, 2020
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6KMD
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![BU of 6kmd by Molmil](/molmil-images/mine/6kmd) | Crystal structure of SeMet-phytochromobilin synthase from tomato in complex with biliverdin | 分子名称: | BILIVERDINE IX ALPHA, CHLORIDE ION, MAGNESIUM ION, ... | 著者 | Sugishima, M, Wada, K, Fukuyama, K. | 登録日 | 2019-07-31 | 公開日 | 2019-12-18 | 最終更新日 | 2020-01-29 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of phytochromobilin synthase in complex with biliverdin IX alpha , a key enzyme in the biosynthesis of phytochrome. J.Biol.Chem., 295, 2020
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6J7A
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![BU of 6j7a by Molmil](/molmil-images/mine/6j7a) | Fusion protein of heme oxygenase-1 and NADPH cytochrome P450 reductase (17aa) | 分子名称: | FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, Heme oxygenase 1,NADPH--cytochrome P450 reductase, ... | 著者 | Sugishima, M, Sato, H, Wada, K, Yamamoto, K. | 登録日 | 2019-01-17 | 公開日 | 2019-04-10 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.269 Å) | 主引用文献 | Crystal structure of a NADPH-cytochrome P450 oxidoreductase (CYPOR) and heme oxygenase 1 fusion protein implies a conformational change in CYPOR upon NADPH/NADP+binding. Febs Lett., 593, 2019
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1UGU
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![BU of 1ugu by Molmil](/molmil-images/mine/1ugu) | Crystal structure of PYP E46Q mutant | 分子名称: | 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN | 著者 | Sugishima, M, Tanimoto, Y, Hamada, N, Tokunaga, F, Fukuyama, K. | 登録日 | 2003-06-19 | 公開日 | 2004-08-10 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Structure of photoactive yellow protein (PYP) E46Q mutant at 1.2 A resolution suggests how Glu46 controls the spectroscopic and kinetic characteristics of PYP. Acta Crystallogr.,Sect.D, 60, 2004
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4QCD
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![BU of 4qcd by Molmil](/molmil-images/mine/4qcd) | Neutron crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha at room temperature. | 分子名称: | BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase, trideuteriooxidanium | 著者 | Unno, M, Ishikawa-Suto, K, Ishihara, M, Hagiwara, Y, Sugishima, M, Wada, K, Fukuyama, K. | 登録日 | 2014-05-10 | 公開日 | 2015-04-29 | 最終更新日 | 2024-03-20 | 実験手法 | NEUTRON DIFFRACTION (1.932 Å), X-RAY DIFFRACTION | 主引用文献 | Insights into the Proton Transfer Mechanism of a Bilin Reductase PcyA Following Neutron Crystallography. J. Am. Chem. Soc., 137, 2015
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7CD0
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![BU of 7cd0 by Molmil](/molmil-images/mine/7cd0) | Crystal structure of the 2-iodoporphobilinogen-bound ES2 intermediate form of human hydroxymethylbilane synthase | 分子名称: | 3-[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-3-(3-hydroxy-3-oxopropyl)-5-methyl-1~{H}-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-1~{H}-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-1~{H}-pyrrol-2-yl]methyl]-1~{H}-pyrrol-3-yl]propanoic acid, 3-[5-(aminomethyl)-4-(carboxymethyl)-2-iodo-1H-pyrrol-3-yl]propanoic acid, Porphobilinogen deaminase | 著者 | Sato, H, Sugishima, M, Wada, K, Hirabayashi, K, Tsukaguchi, M. | 登録日 | 2020-06-18 | 公開日 | 2021-03-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.31 Å) | 主引用文献 | Crystal structures of hydroxymethylbilane synthase complexed with a substrate analog: a single substrate-binding site for four consecutive condensation steps. Biochem.J., 478, 2021
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7CCZ
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![BU of 7ccz by Molmil](/molmil-images/mine/7ccz) | Crystal structure of the ES2 intermediate form of human hydroxymethylbilane synthase | 分子名称: | 3-[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-5-[[4-(2-hydroxy-2-oxoethyl)-3-(3-hydroxy-3-oxopropyl)-5-methyl-1~{H}-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-1~{H}-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-1~{H}-pyrrol-2-yl]methyl]-1~{H}-pyrrol-3-yl]propanoic acid, Porphobilinogen deaminase | 著者 | Sato, H, Sugishima, M, Wada, K, Hirabayashi, K, Tsukaguchi, M. | 登録日 | 2020-06-18 | 公開日 | 2021-03-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.79 Å) | 主引用文献 | Crystal structures of hydroxymethylbilane synthase complexed with a substrate analog: a single substrate-binding site for four consecutive condensation steps. Biochem.J., 478, 2021
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7CCX
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![BU of 7ccx by Molmil](/molmil-images/mine/7ccx) | Crystal structure of the holo form of human hydroxymethylbilane synthase | 分子名称: | 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, Porphobilinogen deaminase | 著者 | Sato, H, Sugishima, M, Wada, K, Hirabayashi, K, Tsukaguchi, M. | 登録日 | 2020-06-18 | 公開日 | 2021-03-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | 主引用文献 | Crystal structures of hydroxymethylbilane synthase complexed with a substrate analog: a single substrate-binding site for four consecutive condensation steps. Biochem.J., 478, 2021
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7CCY
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![BU of 7ccy by Molmil](/molmil-images/mine/7ccy) | Crystal structure of the 2-iodoporphobilinogen-bound holo form of human hydroxymethylbilane synthase | 分子名称: | 3-[5-(aminomethyl)-4-(carboxymethyl)-2-iodo-1H-pyrrol-3-yl]propanoic acid, 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, Porphobilinogen deaminase | 著者 | Sato, H, Sugishima, M, Wada, K, Hirabayashi, K, Tsukaguchi, M. | 登録日 | 2020-06-18 | 公開日 | 2021-03-17 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Crystal structures of hydroxymethylbilane synthase complexed with a substrate analog: a single substrate-binding site for four consecutive condensation steps. Biochem.J., 478, 2021
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3I94
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![BU of 3i94 by Molmil](/molmil-images/mine/3i94) | Crystal structure of PcyA-biliverdin XIII alpha complex | 分子名称: | 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-2-ylidene]methy l]-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase, SULFATE ION | 著者 | Hagiwara, Y, Sugishima, M, Fukuyama, K. | 登録日 | 2009-07-10 | 公開日 | 2009-10-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.04 Å) | 主引用文献 | Structural insights into vinyl reduction regiospecificity of phycocyanobilin:ferredoxin oxidoreductase (PcyA). to be published
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3I8U
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![BU of 3i8u by Molmil](/molmil-images/mine/3i8u) | Crystal structure of PcyA-181,182-dihydrobiliverdin complex | 分子名称: | 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(3-ethenyl-4-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-2-ylidene]methy l]-5-[(Z)-(4-ethyl-3-methyl-5-oxo-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Phycocyanobilin:ferredoxin oxidoreductase | 著者 | Hagiwara, Y, Sugishima, M, Fukuyama, K. | 登録日 | 2009-07-10 | 公開日 | 2009-10-27 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.48 Å) | 主引用文献 | Structural insights into vinyl reduction regiospecificity of phycocyanobilin:ferredoxin oxidoreductase (PcyA). To be Published
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3I95
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![BU of 3i95 by Molmil](/molmil-images/mine/3i95) | |
5B4I
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![BU of 5b4i by Molmil](/molmil-images/mine/5b4i) | Crystal structure of I86D mutant of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin (data 2) | 分子名称: | BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase | 著者 | Hagiwara, Y, Wada, K, Irikawa, T, Unno, M, Fukuyama, K, Sugishima, M. | 登録日 | 2016-04-04 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.11 Å) | 主引用文献 | Atomic-resolution structure of the phycocyanobilin:ferredoxin oxidoreductase I86D mutant in complex with fully protonated biliverdin FEBS Lett., 590, 2016
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5B4H
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![BU of 5b4h by Molmil](/molmil-images/mine/5b4h) | Crystal structure of I86D mutant of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin (data 1) | 分子名称: | BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase | 著者 | Hagiwara, Y, Wada, K, Irikawa, T, Unno, M, Fukuyama, K, Sugishima, M. | 登録日 | 2016-04-04 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.11 Å) | 主引用文献 | Atomic-resolution structure of the phycocyanobilin:ferredoxin oxidoreductase I86D mutant in complex with fully protonated biliverdin FEBS Lett., 590, 2016
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5B4J
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![BU of 5b4j by Molmil](/molmil-images/mine/5b4j) | Crystal structure of I86D mutant of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin (data 3) | 分子名称: | BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase | 著者 | Hagiwara, Y, Wada, K, Irikawa, T, Unno, M, Fukuyama, K, Sugishima, M. | 登録日 | 2016-04-04 | 公開日 | 2017-03-15 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.05 Å) | 主引用文献 | Atomic-resolution structure of the phycocyanobilin:ferredoxin oxidoreductase I86D mutant in complex with fully protonated biliverdin FEBS Lett., 590, 2016
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