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PDB: 59 件

1L1L
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CRYSTAL STRUCTURE OF B-12 DEPENDENT (CLASS II) RIBONUCLEOTIDE REDUCTASE
分子名称: RIBONUCLEOSIDE TRIPHOSPHATE REDUCTASE
著者Sintchak, M.D, Arjara, G, Kellogg, B.A, Stubbe, J, Drennan, C.L.
登録日2002-02-18
公開日2002-04-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer.
Nat.Struct.Biol., 9, 2002
1GJ2
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CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION
分子名称: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ...
著者Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J.
登録日2000-11-01
公開日2001-06-06
最終更新日2024-07-10
実験手法SOLUTION NMR
主引用文献Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry, 40, 2001
2X0X
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Ribonucleotide reductase R1 subunit of E. coli to 2.3 A resolution
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA, SULFATE ION
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2009-12-18
公開日2010-01-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
2XAZ
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Ribonucleotide reductase Y730NO2Y and C439S modified R1 subunit of E. coli
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2010-04-01
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
1N0O
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NMR Structure of d(CCAAGGXCTTGGG), X is a 3'-phosphoglycolate, 5'-phosphate gapped lesion, 10 structures
分子名称: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*GP*G)-3', 5'-D(*CP*CP*CP*AP*AP*GP*GP*CP*CP*TP*TP*GP*G)-3', ...
著者Junker, H.-D, Hoehn, S.T, Bunt, R.C, Marathius, V, Chen, J, Turner, C.J, Stubbe, J.
登録日2002-10-14
公開日2003-01-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Synthesis, Characterization, and Solution Structure of Tethered Oligonucleotides Containing an Internal 3'-Phosphoglycolate, 5'-Phosphate Gapped Lesion
Nucleic Acids Res., 30, 2002
1N0K
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NMR Structure of duplex DNA d(CCAAGGXCTTGGG), X is a 3' phosphoglycolate, 5'phosphate gapped lesion
分子名称: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*GP*G)-3', 5'-D(*CP*CP*CP*AP*AP*GP*GP*CP*CP*TP*TP*GP*G)-3', ...
著者Junker, H.-D, Hoehn, S.T, Bunt, R.C, Marathius, V, Chen, J, Turner, C.J, Stubbe, J.
登録日2002-10-14
公開日2003-01-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Synthesis, Characterization and Solution Structure of Tethered Oligonucleotides Containing an Internal 3'-Phosphoglycolate, 5'-Phosphate Gapped Lesion
Nucleic Acids Res., 30, 2002
2XAV
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Ribonucleotide reductase Y731NO2Y and Y730F modified R1 subunit of E. coli
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2010-03-31
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
2XAX
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Ribonucleotide reductase Y730NO2Y and Y731A modified R1 subunit of E. coli
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2010-04-01
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
2XAK
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Ribonucleotide reductase Y730NO2Y modified R1 subunit of E. coli
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2010-03-31
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
2XAP
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Ribonucleotide reductase Y731NO2Y modified R1 subunit of E. coli to 2. 1 A resolution
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2010-03-31
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
5D1Y
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Low resolution crystal structure of human ribonucleotide reductase alpha6 hexamer in complex with dATP
分子名称: Ribonucleoside-diphosphate reductase large subunit
著者Ando, N, Li, H, Brignole, E.J, Thompson, S, McLaughlin, M.I, Page, J, Asturias, F, Stubbe, J, Drennan, C.L.
登録日2015-08-04
公開日2016-01-20
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (9.005 Å)
主引用文献Allosteric Inhibition of Human Ribonucleotide Reductase by dATP Entails the Stabilization of a Hexamer.
Biochemistry, 55, 2016
2XO5
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RIBONUCLEOTIDE REDUCTASE Y731NH2Y MODIFIED R1 SUBUNIT OF E. COLI
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Minnihan, E.C, Seyedsayamdost, M.R, Uhlin, U, Stubbe, J.
登録日2010-08-09
公開日2010-08-18
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Kinetics of Radical Intermediate Formation and Deoxynucleotide Production in 3-Aminotyrosine- Substituted Escherichia Coli Ribonucleotide Reductases.
J.Am.Chem.Soc., 133, 2011
2XOF
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Ribonucleotide reductase Y122NO2Y modified R2 subunit of E. coli
分子名称: MU-OXO-DIIRON, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2010-08-15
公開日2010-08-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Hot Oxidant, 3-No(2)Y(122) Radical, Unmasks Conformational Gating in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
1G5L
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CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION
分子名称: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ...
著者Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J.
登録日2000-11-01
公開日2001-06-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry, 40, 2001
2XO4
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RIBONUCLEOTIDE REDUCTASE Y730NH2Y MODIFIED R1 SUBUNIT OF E. COLI
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Minnihan, E.C, Seyedsayamdost, M.R, Uhlin, U, Stubbe, J.
登録日2010-08-09
公開日2010-08-18
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Kinetics of Radical Intermediate Formation and Deoxynucleotide Production in 3-Aminotyrosine- Substituted Escherichia Coli Ribonucleotide Reductases.
J.Am.Chem.Soc., 133, 2011
2XAW
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Ribonucleotide reductase Y730NO2Y and Y731F modified R1 subunit of E. coli
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2010-03-31
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
2XAY
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Ribonucleotide reductase Y730NO2Y and C439A modified R1 subunit of E. coli
分子名称: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT ALPHA, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 SUBUNIT BETA
著者Yokoyama, K, Uhlin, U, Stubbe, J.
登録日2010-04-01
公開日2010-04-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Site-Specific Incorporation of 3-Nitrotyrosine as a Probe of Pk(A) Perturbation of Redox-Active Tyrosines in Ribonucleotide Reductase.
J.Am.Chem.Soc., 132, 2010
4DR0
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Crystal structure of Bacillus subtilis dimanganese(II) NrdF
分子名称: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION
著者Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C.
登録日2012-02-16
公開日2012-04-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Dimanganese(II) Site of Bacillus subtilis Class Ib Ribonucleotide Reductase.
Biochemistry, 51, 2012
1B6R
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N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE FROM E. COLI
分子名称: PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE), SULFATE ION
著者Thoden, J.B, Kappock, T.J, Stubbe, J, Holden, H.M.
登録日1999-01-17
公開日1999-11-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide synthetase: a member of the ATP grasp protein superfamily.
Biochemistry, 38, 1999
1B6S
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STRUCTURE OF N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE)
著者Thoden, J.B, Kappock, T.J, Stubbe, J, Holden, H.M.
登録日1999-01-18
公開日1999-11-30
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Three-dimensional structure of N5-carboxyaminoimidazole ribonucleotide synthetase: a member of the ATP grasp protein superfamily.
Biochemistry, 38, 1999
1CLI
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X-RAY CRYSTAL STRUCTURE OF AMINOIMIDAZOLE RIBONUCLEOTIDE SYNTHETASE (PURM), FROM THE E. COLI PURINE BIOSYNTHETIC PATHWAY, AT 2.5 A RESOLUTION
分子名称: PROTEIN (PHOSPHORIBOSYL-AMINOIMIDAZOLE SYNTHETASE), SULFATE ION
著者Li, C, Kappock, T.J, Stubbe, J, Weaver, T.M, Ealick, S.E.
登録日1999-04-28
公開日1999-10-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献X-ray crystal structure of aminoimidazole ribonucleotide synthetase (PurM), from the Escherichia coli purine biosynthetic pathway at 2.5 A resolution.
Structure Fold.Des., 7, 1999
1GSO
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GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE (GAR-SYN) FROM E. COLI.
分子名称: PROTEIN (GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE)
著者Wang, W, Kappock, T.J, Stubbe, J, Ealick, S.E.
登録日1998-09-08
公開日1998-12-09
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献X-ray crystal structure of glycinamide ribonucleotide synthetase from Escherichia coli.
Biochemistry, 37, 1998
1G5E
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NMR STRUCTURE OF AN OLIGONUCLEOTIDE CONTAINING AN ABASIC SITE: BETA ANOMER
分子名称: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*TP*GP*GP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
著者Hoehn, S.T, Turner, C.J, Stubbe, J.
登録日2000-10-31
公開日2001-08-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation.
Nucleic Acids Res., 29, 2001
1GJ0
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NMR STRUCTURE OF AN OLIGONUCLEOTIDE CONTAINING AN ABASIC SITE: BETA ANOMER
分子名称: 5'-D(*CP*CP*AP*AP*AP*GP*(AAB)P*AP*CP*TP*GP*GP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
著者Hoehn, S.T, Turner, C.J, Stubbe, J.
登録日2000-10-31
公開日2001-08-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation.
Nucleic Acids Res., 29, 2001
1G5D
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NMR STRUCTURE OF AN OLIGONUCLEOTIDE CONTAINING AN ABASIC SITE: ALPHA ANOMER
分子名称: 5'-D(*CP*CP*AP*AP*AP*GP*(D1P)P*AP*CP*TP*GP*GP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3'
著者Hoehn, S.T, Turner, C.J, Stubbe, J.
登録日2000-10-31
公開日2001-08-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of an oligonucleotide containing an abasic site: evidence for an unusual deoxyribose conformation.
Nucleic Acids Res., 29, 2001

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