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PDB: 301 件

2TDD
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BU of 2tdd by Molmil
STRUCTURES OF THYMIDYLATE SYNTHASE WITH A C-TERMINAL DELETION: ROLE OF THE C-TERMINUS IN ALIGNMENT OF D/UMP AND CH2H4FOLATE
分子名称: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, 5-HYDROXYMETHYLENE-6-HYDROFOLIC ACID, THYMIDYLATE SYNTHASE
著者Perry, K.M, Carreras, C.W, Chang, L.C, Santi, D.V, Stroud, R.M.
登録日1993-04-05
公開日1993-07-15
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of thymidylate synthase with a C-terminal deletion: role of the C-terminus in alignment of 2'-deoxyuridine 5'-monophosphate and 5,10-methylenetetrahydrofolate.
Biochemistry, 32, 1993
3KOU
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BU of 3kou by Molmil
Structural insights into the catalytic mechanism of CD38: Evidence for a conformationally flexible covalent enzyme-substrate complex.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD38 molecule, ...
著者Egea, P.F, Muller-Steffner, H, Stroud, R.M, Oppenheimer, N.J, Kellenberger, E, Schuber, F.
登録日2009-11-13
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Insights into the mechanism of bovine CD38/NAD+glycohydrolase from the X-ray structures of its Michaelis complex and covalently-trapped intermediates.
Plos One, 7, 2012
1KCE
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E. COLI THYMIDYLATE SYNTHASE MUTANT E58Q IN COMPLEX WITH CB3717 AND 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)
分子名称: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE
著者Sage, C.R, Rutenber, E.E, Stout, T.J, Stroud, R.M.
登録日1996-10-22
公開日1997-04-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An essential role for water in an enzyme reaction mechanism: the crystal structure of the thymidylate synthase mutant E58Q.
Biochemistry, 35, 1996
3MP7
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Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes
分子名称: Preprotein translocase subunit secE, Preprotein translocase subunit secY
著者Egea, P.F, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2010-04-26
公開日2010-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes.
Proc.Natl.Acad.Sci.USA, 107, 2010
3K8N
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Crystal structure of E. Coli CCMG
分子名称: Cytochrome c biogenesis protein ccmG
著者Savage, D, Newby, Z, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2009-10-14
公開日2010-03-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of E. Coli CCMG
To be Published
3GHH
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BU of 3ghh by Molmil
Structural insights into the catalytic mechanism of CD38: Evidence for a conformationally flexible covalent enzyme-substrate complex.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ecto-NAD+ glycohydrolase (CD38 molecule), SULFATE ION, ...
著者Egea, P.F, Muller-Steffner, H, Stroud, R.M, Oppenheimer, N.J, Kellenberger, E, Schuber, F.
登録日2009-03-03
公開日2010-03-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Insights into the mechanism of bovine CD38/NAD+glycohydrolase from the X-ray structures of its Michaelis complex and covalently-trapped intermediates.
Plos One, 7, 2012
1TIS
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BU of 1tis by Molmil
CRYSTAL STRUCTURE OF THYMIDYLATE SYNTHASE FROM T4 PHAGE
分子名称: PHOSPHATE ION, THYMIDYLATE SYNTHASE
著者Finer-Moore, J, Stroud, R.
登録日1994-01-24
公開日1994-04-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of thymidylate synthase from T4 phage: component of a deoxynucleoside triphosphate-synthesizing complex.
Biochemistry, 33, 1994
2IST
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BU of 2ist by Molmil
crystal structure of RluD from E. coli
分子名称: BICARBONATE ION, CHLORIDE ION, Ribosomal large subunit pseudouridine synthase D
著者Foster, P.G, Finer-Moore, J.S, Stroud, R.M.
登録日2006-10-18
公開日2006-10-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal structure of RluD from E. coli
TO BE PUBLISHED
3GH3
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BU of 3gh3 by Molmil
Structural insights into the catalytic mechanism of CD38: Evidence for a conformationally flexible covalent enzyme-substrate complex.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, Ecto-NAD+ glycohydrolase (CD38 molecule), ...
著者Egea, P.F, Muller-Steffner, H, Stroud, R.M, Kellenberger, E, Oppenheimer, N, Schuber, F.
登録日2009-03-02
公開日2010-03-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Insights into the mechanism of bovine CD38/NAD+glycohydrolase from the X-ray structures of its Michaelis complex and covalently-trapped intermediates.
Plos One, 7, 2012
2EVU
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BU of 2evu by Molmil
Crystal structure of aquaporin AqpM at 2.3A resolution
分子名称: Aquaporin aqpM, GLYCEROL, octyl beta-D-glucopyranoside
著者Lee, J.K, Kozono, D, Remis, J, Kitagawa, Y, Agre, P, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2005-10-31
公開日2005-12-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for conductance by the archaeal aquaporin AqpM at 1.68 A.
Proc.Natl.Acad.Sci.Usa, 102, 2005
2G8X
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Escherichia coli Y209W apoprotein
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CARBONATE ION, PHOSPHATE ION, ...
著者Lee, T.T, Finer-Moore, J.S, Stroud, R.M.
登録日2006-03-03
公開日2006-03-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献The role of protein dynamics in thymidylate synthase catalysis: Variants of conserved dUMP-binding Tyr-261
TO BE PUBLISHED
2NS1
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BU of 2ns1 by Molmil
Crystal structure of the e. coli ammonia channel AMTB complexed with the signal transduction protein GLNK
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, Ammonia channel, ...
著者Gruswitz, F, O'Connell III, J, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2006-11-02
公開日2006-12-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.962 Å)
主引用文献Inhibitory complex of the transmembrane ammonia channel, AmtB, and the cytosolic regulatory protein, GlnK, at 1.96
Proc.Natl.Acad.Sci.USA, 104, 2007
2O9F
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BU of 2o9f by Molmil
Crystal Structure of AqpZ mutant L170C
分子名称: Aquaporin Z
著者Savage, D.F, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2006-12-13
公開日2007-02-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis of aquaporin inhibition by mercury.
J.Mol.Biol., 368, 2007
2O9E
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BU of 2o9e by Molmil
Crystal Structure of AqpZ mutant T183C complexed with mercury
分子名称: Aquaporin Z, MERCURY (II) ION
著者Savage, D.F, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2006-12-13
公開日2007-02-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of aquaporin inhibition by mercury.
J.Mol.Biol., 368, 2007
2NRE
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BU of 2nre by Molmil
Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA
分子名称: POTASSIUM ION, leucyl tRNA, tRNA pseudouridine synthase A
著者Hur, S, Stroud, R.M.
登録日2006-11-01
公開日2007-05-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献How U38, 39, and 40 of Many tRNAs Become the Targets for Pseudouridylation by TruA.
Mol.Cell, 26, 2007
2G8A
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BU of 2g8a by Molmil
Lactobacillus casei Y261M in complex with substrate, dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, thymidylate synthase
著者Finer-Moore, J.S, Stroud, R.M.
登録日2006-03-02
公開日2006-03-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261
Biochemistry, 45, 2006
2O9G
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BU of 2o9g by Molmil
Crystal Structure of AqpZ mutant L170C complexed with mercury.
分子名称: Aquaporin Z, MERCURY (II) ION, octyl beta-D-glucopyranoside
著者Savage, D.F, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2006-12-13
公開日2007-02-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of aquaporin inhibition by mercury.
J.Mol.Biol., 368, 2007
2O9D
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BU of 2o9d by Molmil
Crystal Structure of AqpZ mutant T183C.
分子名称: Aquaporin Z, octyl alpha-L-altropyranoside, octyl beta-D-galactopyranoside
著者Savage, D.F, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
登録日2006-12-13
公開日2007-02-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of aquaporin inhibition by mercury.
J.Mol.Biol., 368, 2007
2NQP
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BU of 2nqp by Molmil
Crystal structure of pseudoudirinde synthase TruA in complex with leucyl tRNA
分子名称: POTASSIUM ION, tRNA pseudouridine synthase A, transfer RNA
著者Hur, S, Stroud, R.M.
登録日2006-10-31
公開日2007-05-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献How U38, 39, and 40 of Many tRNAs Become the Targets for Pseudouridylation by TruA.
Mol.Cell, 26, 2007
2G86
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L. casei thymidylate synthase Y261F in complex with substrate, dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Thymidylate synthase
著者Finer-Moore, J.S, Stroud, R.M.
登録日2006-03-01
公開日2006-03-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261
Biochemistry, 45, 2006
2G8D
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Lactobacillus casei thymidylate synthase Y261W-dUMP complex
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, thymidylate synthase
著者Finer-Moore, J.S, Stroud, R.M.
登録日2006-03-02
公開日2006-03-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261
Biochemistry, 45, 2006
2G89
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L. casei thymidylate synthase Y261A in complex with substrate, dUMP
分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, thymidylate synthase
著者Finer-Moore, J.S, Stroud, R.M.
登録日2006-03-02
公開日2006-03-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The role of protein dynamics in thymidylate synthase catalysis: variants of conserved 2'-deoxyuridine 5'-monophosphate (dUMP)-binding Tyr-261
Biochemistry, 45, 2006
1NG1
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BU of 1ng1 by Molmil
N AND GTPASE DOMAINS OF THE SIGNAL SEQUENCE RECOGNITION PROTEIN FFH FROM THERMUS AQUATICUS
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, CADMIUM ION, ...
著者Freymann, D.M, Stroud, R.M, Walter, P.
登録日1998-04-30
公開日1999-07-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Functional changes in the structure of the SRP GTPase on binding GDP and Mg2+GDP.
Nat.Struct.Biol., 6, 1999
2OML
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BU of 2oml by Molmil
crystal structure of E. coli pseudouridine synthase RluE
分子名称: Ribosomal large subunit pseudouridine synthase E, SULFATE ION
著者Pan, H, Ho, J.D, Stroud, R.M, Finer-Moore, J.
登録日2007-01-22
公開日2007-03-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The Crystal Structure of E. coli rRNA Pseudouridine Synthase RluE.
J.Mol.Biol., 367, 2007
5EU7
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BU of 5eu7 by Molmil
Crystal structure of HIV-1 integrase catalytic core in complex with Fab
分子名称: FAB Heavy Chain, FAB light chain, Integrase
著者Galilee, M, Griner, S.L, Stroud, R.M, Alian, A.
登録日2015-11-18
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献The Preserved HTH-Docking Cleft of HIV-1 Integrase Is Functionally Critical.
Structure, 24, 2016

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