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PDB: 11 results

4RQ9
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BU of 4rq9 by Molmil
Crystal structure of the chromophore-binding domain of Stigmatella aurantiaca bacteriophytochrome (Thr289His mutant) in the Pr state
Descriptor: 1,2-ETHANEDIOL, BILIVERDINE IX ALPHA, GLYCEROL, ...
Authors:Woitowich, N.C, Halavaty, A.S, Gallagher, K.D, Nugent, A.C, Patel, H, Duong, P, Kovaleva, S.E, St.Peter, S, Ozarowski, W.B, Hernandez, C.N, Stojkovic, E.A.
Deposit date:2014-10-31
Release date:2016-05-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the chromophore-binding domain of Stigmatella aurantiaca bacteriophytochrome (Thr289His mutant) in the Pr state
To be Published
8UPK
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BU of 8upk by Molmil
Pr/Pfr heterodimer (hybrid) state of Stigmatella aurantiaca bacteriophytochrome 2
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase)
Authors:Malla, T.N, Schmidt, M, Stojkovic, E.A.
Deposit date:2023-10-22
Release date:2024-09-25
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM.
Sci Adv, 10, 2024
8UPM
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BU of 8upm by Molmil
Pfr state of Stigmatella aurantiaca bacteriophytochrome 2
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase)
Authors:Malla, T.N, Schmidt, M, Stojkovic, E.A.
Deposit date:2023-10-23
Release date:2024-09-25
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM.
Sci Adv, 10, 2024
8UPH
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BU of 8uph by Molmil
Prf state of Stigmatella aurantiaca bacteriophytochrome 2
Descriptor: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase)
Authors:Malla, T.N, Schmidt, M, Stojkovic, E.A.
Deposit date:2023-10-22
Release date:2024-09-25
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.13 Å)
Cite:Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM.
Sci Adv, 10, 2024
8UQK
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BU of 8uqk by Molmil
Pfr state of photosensory core module of Stigmatella aurantiaca bacteriophytochrome 2
Descriptor: Bacteriophytochrome (Light-regulated signal transduction histidine kinase)
Authors:Malla, T.N, Schmidt, M, Stojkovic, E.A.
Deposit date:2023-10-23
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (4.61 Å)
Cite:Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM.
Sci Adv, 10, 2024
8UQI
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BU of 8uqi by Molmil
Pr/Pfr heterodimeric state of photosensory core module of Stigmatella aurantiaca bacteriophytochrome 2
Descriptor: Bacteriophytochrome (Light-regulated signal transduction histidine kinase)
Authors:Malla, T.N, Schmidt, M, Stojkovic, E.A.
Deposit date:2023-10-23
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Photoreception and signaling in bacterial phytochrome revealed by single-particle cryo-EM.
Sci Adv, 10, 2024
2OOL
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BU of 2ool by Molmil
Crystal structure of the chromophore-binding domain of an unusual bacteriophytochrome RpBphP3 from R. palustris
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Sensor protein
Authors:Yang, X, Stojkovic, E.A, Kuk, J, Moffat, K.
Deposit date:2007-01-25
Release date:2007-07-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the chromophore binding domain of an unusual bacteriophytochrome, RpBphP3, reveals residues that modulate photoconversion.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6PU2
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BU of 6pu2 by Molmil
Dark, Mutant H275T , 100K, PCM Myxobacterial Phytochrome, P2
Descriptor: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Pandey, S, Schmidt, M, Stojkovic, E.A.
Deposit date:2019-07-16
Release date:2019-10-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
Struct Dyn., 6, 2019
6PTQ
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BU of 6ptq by Molmil
Dark, Room Temperature, PCM Myxobacterial Phytochrome, P2, Wild Type
Descriptor: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, BENZAMIDINE, Photoreceptor-histidine kinase BphP
Authors:Pandey, S, Schmidt, M, Stojkovic, E.A.
Deposit date:2019-07-16
Release date:2019-10-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
Struct Dyn., 6, 2019
6PTX
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BU of 6ptx by Molmil
Dark, 100K, PCM Myxobacterial Phytochrome, P2, Wild Type,
Descriptor: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, Photoreceptor-histidine kinase BphP
Authors:Pandey, S, Schmidt, M, Stojkovic, E.A.
Deposit date:2019-07-16
Release date:2019-10-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:High-resolution crystal structures of a myxobacterial phytochrome at cryo and room temperatures.
Struct Dyn., 6, 2019
7MPB
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BU of 7mpb by Molmil
SARS Coronavirus-2 Main Protease 3CL-pro binding Ascorbate
Descriptor: 3C-like proteinase, ASCORBIC ACID, TRIFLUOROETHANOL
Authors:Pandey, S, Malla, T.N, Stojkovic, E.A, Schmidt, M.
Deposit date:2021-05-04
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Vitamin C inhibits SARS coronavirus-2 main protease essential for viral replication
Biorxiv, 2021

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PDB entries from 2024-11-20

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