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PDB: 175 results
6VFX
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BU of 6vfx by Molmil
ClpXP from Neisseria meningitidis - Conformation B
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
Authors:Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-06
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
6VGN
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BU of 6vgn by Molmil
ClpP1P2 complex from M. tuberculosis bound to ADEP
Descriptor: ATP-dependent Clp protease proteolytic subunit, ATP-dependent Clp protease proteolytic subunit 1, R0M-WFP-ALO-PRO-YCP-ALA-MP8
Authors:Ripstein, Z.A, Vahidi, S, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-08
Release date:2020-03-18
Last modified:2020-04-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:An allosteric switch regulatesMycobacterium tuberculosisClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR.
Proc.Natl.Acad.Sci.USA, 117, 2020
7UWA
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BU of 7uwa by Molmil
Citrus V-ATPase State 1, H in contact with subunits AB
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Abdelaziz, R.A, Keon, K.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UW9
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BU of 7uw9 by Molmil
Citrus V-ATPase State 1, H in contact with subunit a
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWB
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BU of 7uwb by Molmil
Citrus V-ATPase State 2, Highest-Resolution Class
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWD
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BU of 7uwd by Molmil
Citrus V-ATPase State 2, H in contact with subunits AB
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit, V-type proton ATPase subunit AP1 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWC
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BU of 7uwc by Molmil
Citrus V-ATPase State 2, H in contact with subunit a
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7TKP
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BU of 7tkp by Molmil
Yeast ATP synthase State 3catalytic(b) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKI
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BU of 7tki by Molmil
Yeast ATP synthase State 2catalytic(c) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKM
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BU of 7tkm by Molmil
Yeast ATP synthase State 3binding(b) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKO
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BU of 7tko by Molmil
Yeast ATP synthase State 3catalytic(a) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKH
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BU of 7tkh by Molmil
Yeast ATP synthase State 2catalytic(b) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKN
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BU of 7tkn by Molmil
Yeast ATP synthase State 3binding(c) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKR
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BU of 7tkr by Molmil
Yeast ATP synthase State 3catalytic(d) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKF
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BU of 7tkf by Molmil
Yeast ATP synthase State 2binding(b) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKK
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BU of 7tkk by Molmil
Yeast ATP synthase State 2catalytic(e) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKG
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BU of 7tkg by Molmil
Yeast ATP synthase State 2catalytic(a) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKQ
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BU of 7tkq by Molmil
Yeast ATP synthase State 3catalytic(c) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKJ
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BU of 7tkj by Molmil
Yeast ATP synthase State 2catalytic(d) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKS
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BU of 7tks by Molmil
Yeast ATP synthase State 3catalytic(e) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.5 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7TKL
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BU of 7tkl by Molmil
Yeast ATP synthase State 3binding(a) with 10 mM ATP backbone model
Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ...
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2022-01-17
Release date:2022-05-11
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Structure of ATP synthase under strain during catalysis.
Nat Commun, 13, 2022
7UZK
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BU of 7uzk by Molmil
Rat Kidney V1 complex lacking subunit H with SidK and NCOA7B, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7UZJ
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BU of 7uzj by Molmil
Rat Kidney V1 complex with SidK and NCOA7B, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
6VFS
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BU of 6vfs by Molmil
ClpXP from Neisseria meningitidis - Conformation A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit ClpX, ...
Authors:Ripstein, Z.A, Vahidi, S, Houry, W.A, Rubinstein, J.L, Kay, L.E.
Deposit date:2020-01-06
Release date:2020-01-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A processive rotary mechanism couples substrate unfolding and proteolysis in the ClpXP degradation machinery.
Elife, 9, 2020
1MXS
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BU of 1mxs by Molmil
Crystal structure of 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase from Pseudomonas putida.
Descriptor: KDPG Aldolase, SULFATE ION
Authors:Watanabe, L, Bell, B.J, Lebioda, L, Rios-Steiner, J.L, Tulinsky, A, Arni, R.K.
Deposit date:2002-10-03
Release date:2003-09-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of 2-keto-3-deoxy-6-phosphogluconate (KDPG) aldolase from Pseudomonas putida.
Acta Crystallogr.,Sect.D, 59, 2003

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PDB entries from 2024-11-06

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