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PDB: 295 results

6JQ0
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BU of 6jq0 by Molmil
CryoEM structure of Abo1 Walker B (E372Q) mutant hexamer - ATP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Uncharacterized AAA domain-containing protein C31G5.19, ...
Authors:Cho, C, Jang, J, Song, J.J.
Deposit date:2019-03-28
Release date:2019-12-25
Last modified:2020-01-01
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Structural basis of nucleosome assembly by the Abo1 AAA+ ATPase histone chaperone.
Nat Commun, 10, 2019
3OX4
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BU of 3ox4 by Molmil
Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 complexed with NAD cofactor
Descriptor: Alcohol dehydrogenase 2, FE (II) ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Moon, J.H, Lee, H.J, Song, J.M, Park, S.Y, Park, M.Y, Park, H.M, Sun, J, Park, J.H, Kim, J.S.
Deposit date:2010-09-21
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 with and without NAD+ cofactor
J.Mol.Biol., 407, 2011
3OWO
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BU of 3owo by Molmil
Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 with and without NAD cofactor
Descriptor: Alcohol dehydrogenase 2, FE (II) ION
Authors:Moon, J.H, Lee, H.J, Song, J.M, Park, S.Y, Park, M.Y, Park, H.M, Sun, J, Park, J.H, Kim, J.S.
Deposit date:2010-09-20
Release date:2011-02-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structures of iron-dependent alcohol dehydrogenase 2 from Zymomonas mobilis ZM4 with and without NAD+ cofactor
J.Mol.Biol., 407, 2011
6KNR
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BU of 6knr by Molmil
Crystal structure of Estrogen-related receptor gamma ligand-binding domain with DN200699
Descriptor: (E)-4-(1-(4-(1-cyclopropylpiperidin-4-yl)phenyl)-5-hydroxy-2-phenylpent-1-en-1-yl)phenol, Estrogen-related receptor gamma
Authors:Yoon, H, Kim, J, Chin, J, Song, J, Cho, S.J.
Deposit date:2019-08-07
Release date:2020-08-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:An orally available inverse agonist of estrogen-related receptor gamma showed expanded efficacy for the radioiodine therapy of poorly differentiated thyroid cancer.
Eur.J.Med.Chem., 205, 2020
3FHA
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BU of 3fha by Molmil
Structure of endo-beta-N-acetylglucosaminidase A
Descriptor: CALCIUM ION, Endo-beta-N-acetylglucosaminidase, GLYCEROL, ...
Authors:Yin, J, Li, L, Shaw, N, Li, Y, Song, J.K, Zhang, W, Xia, C, Zhang, R, Joachimiak, A, Zhang, H.C, Wang, L.X, Wang, P, Liu, Z.J.
Deposit date:2008-12-09
Release date:2009-04-28
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis and catalytic mechanism for the dual functional endo-beta-N-acetylglucosaminidase A.
Plos One, 4, 2009
3RYO
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BU of 3ryo by Molmil
Crystal Structure of Enhanced Intracellular Survival (Eis) Protein from Mycobacterium tuberculosis with Acetyl CoA
Descriptor: ACETYL COENZYME *A, Enhanced intracellular survival protein
Authors:Kim, K.H, An, D.R, Yoon, J.Y, Kim, H.S, Yoon, H.J, Song, J, Im, H.N, Kim, J, Kim, D.J, Lee, S.J, Kim, H.J, Lee, J.Y, Suh, S.W.
Deposit date:2011-05-11
Release date:2012-05-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mycobacterium tuberculosis Eis protein initiates suppression of host immune responses by acetylation of DUSP16/MKP-7
Proc.Natl.Acad.Sci.USA, 2012
1YYC
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BU of 1yyc by Molmil
Solution Structure of a putative late embryogenesis abundant (LEA) protein At2g46140.1
Descriptor: putative late embryogenesis abundant protein
Authors:Center for Eukaryotic Structural Genomics (CESG), Song, J, Tyler, R.C, Lee, M.S, Markley, J.L.
Deposit date:2005-02-24
Release date:2005-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of a putative late embryogenesis abundant (LEA) protein At2g46140.1
To be Published
4LKL
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BU of 4lkl by Molmil
Crystal structure of Plk1 Polo-box domain in complex with PL-55
Descriptor: ADAMANTANE, PL-55, Serine/threonine-protein kinase PLK1
Authors:Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2013-07-08
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Exploring the binding nature of pyrrolidine pocket-dependent interactions in the polo-box domain of polo-like kinase 1
Plos One, 8, 2013
3SXO
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BU of 3sxo by Molmil
Mycobacterium tuberculosis Eis protein initiates modulation of host immune responses by acetylation of DUSP16/MKP-7
Descriptor: Enhanced intracellular survival protein
Authors:Kim, K.H, An, D.R, Yoon, J.Y, Kim, H.S, Yoon, H.J, Song, J.S, Im, H.N, Kim, J, Kim, D.J, Lee, S.J, Kim, H.J, Lee, J.Y, Suh, S.W.
Deposit date:2011-07-15
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mycobacterium tuberculosis Eis protein initiates modulation of host immune responses by acetylation of DUSP16/MKP-7
To be Published
4RL5
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BU of 4rl5 by Molmil
Crystal structure of the Arabidopsis exocyst subunit exo70 family protein A1
Descriptor: Exocyst complex component EXO70A1
Authors:Zhang, Z.-M, Zhang, C, Song, J.
Deposit date:2014-10-15
Release date:2015-11-25
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Endosidin2 targets conserved exocyst complex subunit EXO70 to inhibit exocytosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
2GJ2
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BU of 2gj2 by Molmil
Crystal Structure of VP9 from White Spot Syndrome Virus
Descriptor: CADMIUM ION, wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
5GZO
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BU of 5gzo by Molmil
Structure of neutralizing antibody bound to Zika envelope protein
Descriptor: Antibody heavy chain, Antibody light chain, Genome polyprotein
Authors:Wang, Q, Yang, H, Liu, X, Dai, L, Ma, T, Qi, J, Wong, G, Peng, R, Liu, S, Li, J, Li, S, Song, J, Liu, J, He, J, Yuan, H, Xiong, Y, Liao, Y, Li, J, Yang, J, Tong, Z, Griffin, B, Bi, Y, Liang, M, Xu, X, Cheng, G, Wang, P, Qiu, X, Kobinger, G, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2016-09-29
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.755 Å)
Cite:Molecular determinants of human neutralizing antibodies isolated from a patient infected with Zika virus
Sci Transl Med, 8, 2016
5GZN
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BU of 5gzn by Molmil
Structure of neutralizing antibody bound to Zika envelope protein
Descriptor: Antibody Heavy chain, Antibody light chain, Genome polyprotein
Authors:Wang, Q, Yang, H, Liu, X, Dai, L, Ma, T, Qi, J, Wong, G, Peng, R, Liu, S, Li, J, Li, S, Song, J, Liu, J, He, J, Yuan, H, Xiong, Y, Liao, Y, Li, J, Yang, J, Tong, Z, Griffin, B, Bi, Y, Liang, M, Xu, X, Cheng, G, Wang, P, Qiu, X, Kobinger, G, Shi, Y, Yan, J, Gao, G.F.
Deposit date:2016-09-29
Release date:2016-12-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular determinants of human neutralizing antibodies isolated from a patient infected with Zika virus
Sci Transl Med, 8, 2016
4K6L
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BU of 4k6l by Molmil
Structure of Typhoid Toxin
Descriptor: Cytolethal distending toxin subunit B homolog, GLYCEROL, Putative pertussis-like toxin subunit
Authors:Gao, X, Song, J, Galan, J.
Deposit date:2013-04-16
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.393 Å)
Cite:Structure and function of the Salmonella Typhi chimaeric A(2)B(5) typhoid toxin.
Nature, 499, 2013
1Z3K
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BU of 1z3k by Molmil
Structural Insight into the Binding Diversity between the Tyr-Phosphorylated Human EphrinBs and Nck2 SH2 Domain
Descriptor: Cytoplasmic protein NCK2
Authors:Ran, X, Song, J.
Deposit date:2005-03-14
Release date:2005-03-29
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural insight into the binding diversity between the Tyr-phosphorylated human ephrinBs and Nck2 SH2 domain.
J.Biol.Chem., 280, 2005
3GL6
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BU of 3gl6 by Molmil
Crystal structure of JARID1A-PHD3 complexed with H3(1-9)K4me3 peptide
Descriptor: Histone H3, Histone demethylase JARID1A, ZINC ION
Authors:Wang, Z, Song, J, Patel, D.J.
Deposit date:2009-03-11
Release date:2009-05-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Haematopoietic malignancies caused by dysregulation of a chromatin-binding PHD finger.
Nature, 459, 2009
2GJI
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BU of 2gji by Molmil
NMR solution structure of VP9 from White Spot Syndrome Virus
Descriptor: wsv230
Authors:Liu, Y, Wu, J.L, Song, J.X, Sivaraman, J, Hew, C.L.
Deposit date:2006-03-30
Release date:2006-09-19
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Identification of a Novel Nonstructural Protein, VP9, from White Spot Syndrome Virus: Its Structure Reveals a Ferredoxin Fold with Specific Metal Binding Sites
J.Virol., 80, 2006
3IKK
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BU of 3ikk by Molmil
Crystal structure analysis of msp domain
Descriptor: Vesicle-associated membrane protein-associated protein B/C
Authors:Shi, J, Lua, S, Song, J.
Deposit date:2009-08-06
Release date:2010-05-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Elimination of the native structure and solubility of the hVAPB MSP domain by the Pro56Ser mutation that causes amyotrophic lateral sclerosis.
Biochemistry, 49, 2010
6NAC
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BU of 6nac by Molmil
Crystal structure of [FeFe]-hydrogenase I (CpI) solved with single pulse free electron laser data
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Cohen, A.E, Davidson, C.M, Zadvornyy, O.A, Keable, S.M, Lyubimov, A.Y, Song, J, McPhillips, S.E, Soltis, S.M, Peters, J.W.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Tuning Catalytic Bias of Hydrogen Gas Producing Hydrogenases.
J.Am.Chem.Soc., 142, 2020
3TD5
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BU of 3td5 by Molmil
Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala
Descriptor: CHLORIDE ION, Outer membrane protein omp38, peptide(L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala)
Authors:Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2011-08-10
Release date:2011-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
3TD4
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BU of 3td4 by Molmil
Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with diaminopimelate
Descriptor: 2,6-DIAMINOPIMELIC ACID, Outer membrane protein omp38
Authors:Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2011-08-10
Release date:2011-10-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
3TD3
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BU of 3td3 by Molmil
Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with glycine
Descriptor: GLYCINE, Outer membrane protein omp38
Authors:Park, J.S, Lee, W.C, Song, J.H, Kim, H.Y.
Deposit date:2011-08-10
Release date:2011-10-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Mechanism of anchoring of OmpA protein to the cell wall peptidoglycan of the gram-negative bacterial outer membrane
Faseb J., 26, 2012
3UFB
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BU of 3ufb by Molmil
Crystal structure of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016
Descriptor: Type I restriction-modification system methyltransferase subunit
Authors:Park, S.Y, Lee, H.J, Sun, J, Nishi, K, Song, J.M, Kim, J.S.
Deposit date:2011-11-01
Release date:2012-11-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of a modification subunit of a putative type I restriction enzyme from Vibrio vulnificus YJ016
Acta Crystallogr.,Sect.D, 68, 2012
3EAJ
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BU of 3eaj by Molmil
Crystal structure of SARS-CoV main protease quadruple mutant STIF/A with two molecules in one asymmetric unit
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Jayaraman, S, Song, J.X.
Deposit date:2008-08-26
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:crystal structure of SARS-CoV Mpro mutant with two molecules one ASU
To be Published
3EA9
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BU of 3ea9 by Molmil
Crystal structure of SARS-CoV main protease quadruple mutant STIF/A with one molecule in one asymmetric unit
Descriptor: 3C-like proteinase
Authors:Shi, J.H, Jayaraman, S, Song, J.X.
Deposit date:2008-08-25
Release date:2009-09-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:crystal structure of SARS-CoV Mpro quadruple mutant
To be Published

220113

PDB entries from 2024-05-22

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