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PDB: 458 results

6ICL
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BU of 6icl by Molmil
Pseudomonas putida CBB5 NdmB
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, Methylxanthine N3-demethylase NdmB
Authors:Kim, J.H, Kim, B.H, Kang, S.Y, Song, H.K.
Deposit date:2018-09-06
Release date:2019-09-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and Mechanistic Insights into Caffeine Degradation by the Bacterial N-Demethylase Complex.
J.Mol.Biol., 431, 2019
1NU2
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BU of 1nu2 by Molmil
Crystal structure of the murine Disabled-1 (Dab1) PTB domain-ApoER2 peptide-PI-4,5P2 ternary complex
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Disabled homolog 1, peptide derived from murine Apolipoprotein E Receptor-2
Authors:Stolt, P.C, Jeon, H, Song, H.K, Herz, J, Eck, M.J, Blacklow, S.C.
Deposit date:2003-01-30
Release date:2003-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Origins of Peptide Selectivity and Phosphoinositide Binding Revealed by Structures of Disabled-1 PTB Domain Complexes
Structure, 11, 2003
7YRB
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BU of 7yrb by Molmil
UBR box of human UBR6
Descriptor: F-box protein 11, isoform CRA_f, SULFATE ION, ...
Authors:Kim, B, Song, H.K.
Deposit date:2022-08-09
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Crystal structure of UBR box from human UBR6
To Be Published
7BZT
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BU of 7bzt by Molmil
Cryo-EM structure of mature Coxsackievirus A10 in complex with KRM1 at pH 7.4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, Capsid protein VP2, ...
Authors:Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J.
Deposit date:2020-04-28
Release date:2020-07-22
Last modified:2020-08-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1.
Proc.Natl.Acad.Sci.USA, 117, 2020
7BZU
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BU of 7bzu by Molmil
Cryo-EM structure of mature Coxsackievirus A10 in complex with KRM1 at pH 5.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, Capsid protein VP2, ...
Authors:Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J.
Deposit date:2020-04-28
Release date:2020-07-22
Last modified:2020-08-19
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1.
Proc.Natl.Acad.Sci.USA, 117, 2020
4ELS
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BU of 4els by Molmil
Structure of E. Coli. 1,4-dihydroxy-2- naphthoyl coenzyme A synthases (MENB) in complex with bicarbonate
Descriptor: 1,2-ETHANEDIOL, 1,4-Dihydroxy-2-naphthoyl-CoA synthase, BICARBONATE ION, ...
Authors:Sun, Y.R, Song, H.G, Li, J, Jiang, M, Li, Y, Zhou, J.H, Guo, Z.H.
Deposit date:2012-04-11
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Active site binding and catalytic role of bicarbonate in 1,4-dihydroxy-2-naphthoyl coenzyme A synthases from vitamin K biosynthetic pathways
Biochemistry, 51, 2012
4ELX
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BU of 4elx by Molmil
Structure of apo E.coli. 1,4-dihydroxy-2- naphthoyl CoA synthases with Cl
Descriptor: 1,2-ETHANEDIOL, 1,4-Dihydroxy-2-naphthoyl-CoA synthase, CHLORIDE ION, ...
Authors:Sun, Y.R, Song, H.G, Li, J, Jiang, M, Li, Y, Zhou, J.H, Guo, Z.H.
Deposit date:2012-04-11
Release date:2012-06-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.191 Å)
Cite:Active site binding and catalytic role of bicarbonate in 1,4-dihydroxy-2-naphthoyl coenzyme A synthases from vitamin K biosynthetic pathways
Biochemistry, 51, 2012
4ELW
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BU of 4elw by Molmil
Structure of E. coli. 1,4-dihydroxy-2- naphthoyl coenzyme A synthases (MENB) in complex with nitrate
Descriptor: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, CHLORIDE ION, GLYCEROL, ...
Authors:Sun, Y.R, Song, H.G, Li, J, Jiang, M, Li, Y, Zhou, J.H, Guo, Z.H.
Deposit date:2012-04-11
Release date:2012-06-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Active site binding and catalytic role of bicarbonate in 1,4-dihydroxy-2-naphthoyl coenzyme A synthases from vitamin K biosynthetic pathways
Biochemistry, 51, 2012
3MCD
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BU of 3mcd by Molmil
Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Descriptor: Cell division topological specificity factor
Authors:Kang, G.B, Song, H.E, Kim, M.K, Youn, H.S, Lee, J.G, An, J.Y, Jeon, H, Chun, J.S, Eom, S.H.
Deposit date:2010-03-29
Release date:2010-05-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Mol.Microbiol., 76, 2010
1NTV
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BU of 1ntv by Molmil
Crystal Structure of the Disabled-1 (Dab1) PTB domain-ApoER2 peptide complex
Descriptor: Apolipoprotein E Receptor-2 peptide, Disabled homolog 1, PHOSPHATE ION
Authors:Stolt, P.C, Jeon, H, Song, H.K, Herz, J, Eck, M.J, Blacklow, S.C.
Deposit date:2003-01-30
Release date:2003-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Origins of Peptide Selectivity and Phosphoinositide Binding Revealed by Structures of Disabled-1 PTB Domain Complexes
Structure, 11, 2003
6SJ1
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BU of 6sj1 by Molmil
Amidohydrolase, AHS
Descriptor: Amidohydrolase, ZINC ION
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
3KU7
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BU of 3ku7 by Molmil
Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Descriptor: Cell division topological specificity factor
Authors:Kang, G.B, Song, H.E, Kim, M.K, Eom, S.H.
Deposit date:2009-11-26
Release date:2010-05-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of Helicobacter pylori MinE, a cell division topological specificity factor
Mol.Microbiol., 76, 2010
1XMM
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BU of 1xmm by Molmil
Structure of human Dcps bound to m7GDP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, N7-METHYL-GUANOSINE-5'-MONOPHOSPHATE, PHOSPHATE ION, ...
Authors:Chen, N, Song, H.
Deposit date:2004-10-04
Release date:2005-03-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of human DcpS in ligand-free and m7GDP-bound forms suggest a dynamic mechanism for scavenger mRNA decapping.
J.Mol.Biol., 347, 2005
4EMH
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BU of 4emh by Molmil
Crystal structure of SpLsm4
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm4
Authors:Jiang, S.M, Wu, D.H, Song, H.W.
Deposit date:2012-04-12
Release date:2012-06-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe.
Plos One, 7, 2012
2R62
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BU of 2r62 by Molmil
Crystal structure of Helicobacter pylori ATP dependent protease, FtsH
Descriptor: Cell division protease ftsH homolog
Authors:Kim, S.H, Kang, G.B, Song, H.-E, Park, S.J, Bae, M.-H, Eom, S.H.
Deposit date:2007-09-05
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural studies on Helicobacter pyloriATP-dependent protease, FtsH
J.SYNCHROTRON RADIAT., 15, 2008
2R65
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BU of 2r65 by Molmil
Crystal structure of Helicobacter pylori ATP dependent protease, FtsH ADP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cell division protease ftsH homolog
Authors:Kim, S.H, Kang, G.B, Song, H.-E, Park, S.J, Bae, M.-H, Eom, S.H.
Deposit date:2007-09-05
Release date:2008-09-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural studies on Helicobacter pyloriATP-dependent protease, FtsH
J.SYNCHROTRON RADIAT., 15, 2008
4EMG
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BU of 4emg by Molmil
Crystal structure of SpLsm3
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3
Authors:Jiang, S.M, Wu, D.H, Song, H.W.
Deposit date:2012-04-12
Release date:2012-06-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe.
Plos One, 7, 2012
1EW4
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BU of 1ew4 by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI CYAY PROTEIN REVEALS A NOVEL FOLD FOR THE FRATAXIN FAMILY
Descriptor: CYAY PROTEIN
Authors:Suh, S.W, Cho, S, Lee, M.G, Yang, J.K, Lee, J.Y, Song, H.K.
Deposit date:2000-04-22
Release date:2000-08-09
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of Escherichia coli CyaY protein reveals a previously unidentified fold for the evolutionarily conserved frataxin family.
Proc.Natl.Acad.Sci.USA, 97, 2000
1L9E
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BU of 1l9e by Molmil
Role of Histidine 269 in Catalysis by Monomeric Sarcosine Oxidase
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, IMIDAZOLE, ...
Authors:Zhao, G, Song, H, Chen, Z.-w, Mathews, F.S, Jorns, M.S.
Deposit date:2002-03-22
Release date:2002-08-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Monomeric sarcosine oxidase: role of histidine 269 in catalysis.
Biochemistry, 41, 2002
1L9C
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BU of 1l9c by Molmil
Role of Histidine 269 in Catalysis by Monomeric Sarcosine Oxidase
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric Sarcosine Oxidase, ...
Authors:Zhao, G, Song, H, Chen, Z.-w, Mathews, F.S, Jorns, M.S.
Deposit date:2002-03-22
Release date:2002-08-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Monomeric sarcosine oxidase: role of histidine 269 in catalysis.
Biochemistry, 41, 2002
1L9D
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BU of 1l9d by Molmil
Role of Histidine 269 in Catalysis by Monomeric Sarcosine Oxidase
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Monomeric sarcosine oxidase, ...
Authors:Zhao, G, Song, H, Chen, Z.-w, Mathews, F.S, Jorns, M.S.
Deposit date:2002-03-22
Release date:2002-08-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Monomeric sarcosine oxidase: role of histidine 269 in catalysis.
Biochemistry, 41, 2002
1R4A
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BU of 1r4a by Molmil
Crystal Structure of GTP-bound ADP-ribosylation Factor Like Protein 1 (Arl1) and GRIP Domain of Golgin245 COMPLEX
Descriptor: ADP-ribosylation factor-like protein 1, Golgi autoantigen, golgin subfamily A member 4, ...
Authors:Wu, M, Lu, L, Hong, W, Song, H.
Deposit date:2003-10-04
Release date:2004-01-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for recruitment of GRIP domain golgin-245 by small GTPase Arl1.
Nat.Struct.Mol.Biol., 11, 2004
1LZS
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BU of 1lzs by Molmil
STRUCTURAL CHANGES OF THE ACTIVE SITE CLEFT AND DIFFERENT SACCHARIDE BINDING MODES IN HUMAN LYSOZYME CO-CRYSTALLIZED WITH HEXA-N-ACETYL-CHITOHEXAOSE AT PH 4.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HUMAN LYSOZYME, ...
Authors:Matsushima, M, Song, H.
Deposit date:1994-09-14
Release date:1995-04-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural changes of active site cleft and different saccharide binding modes in human lysozyme co-crystallized with hexa-N-acetyl-chitohexaose at pH 4.0.
J.Mol.Biol., 244, 1994
4B6H
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BU of 4b6h by Molmil
Structure of hDcp1a in complex with proline rich sequence of PNRC2
Descriptor: MRNA-DECAPPING ENZYME 1A, PROLINE-RICH NUCLEAR RECEPTOR COACTIVATOR 2
Authors:Lai, T, Song, H.
Deposit date:2012-08-13
Release date:2013-03-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis of the Pnrc2-Mediated Link between Mrna Surveillance and Decapping.
Structure, 20, 2012
3TTN
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BU of 3ttn by Molmil
Crystal structures of polyamine receptors SpuD and SpuE from Pseudomonas aeruginosa
Descriptor: Polyamine transport protein, SPERMIDINE
Authors:Lim, S.C, Wu, D.H, Song, H.W.
Deposit date:2011-09-15
Release date:2012-03-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Substrate Binding Specificity Revealed by the Crystal Structures of Polyamine Receptors SpuD and SpuE from Pseudomonas aeruginosa
J.Mol.Biol., 416, 2012

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