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PDB: 458 results

5HZY
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BU of 5hzy by Molmil
Crystal structure of the legionella pneumophila effector protein RavZ - P6322
Descriptor: Uncharacterized protein RavZ
Authors:Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K.
Deposit date:2016-02-03
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.548 Å)
Cite:The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane
Autophagy, 13, 2017
5IO3
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BU of 5io3 by Molmil
Crystal structure of the legionella pneumophila effector protein RavZ - I422
Descriptor: Uncharacterized protein RavZ
Authors:Kwon, D.H, Kim, L, Kim, B.-W, Hong, S.B, Song, H.K.
Deposit date:2016-03-08
Release date:2016-11-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:The 1:2 complex between RavZ and LC3 reveals a mechanism for deconjugation of LC3 on the phagophore membrane
Autophagy, 13, 2017
2A1R
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BU of 2a1r by Molmil
Crystal structure of PARN nuclease domain
Descriptor: 5'-R(*AP*AP*A)-3', Poly(A)-specific ribonuclease PARN
Authors:Wu, M, Song, H.
Deposit date:2005-06-21
Release date:2005-12-20
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insight into poly(A) binding and catalytic mechanism of human PARN
Embo J., 24, 2005
2A1S
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BU of 2a1s by Molmil
Crystal structure of native PARN nuclease domain
Descriptor: Poly(A)-specific ribonuclease PARN
Authors:Wu, M, Song, H.
Deposit date:2005-06-21
Release date:2005-12-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insight into poly(A) binding and catalytic mechanism of human PARN
Embo J., 24, 2005
2JOO
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BU of 2joo by Molmil
The NMR Solution Structure of Recombinant RGD-hirudin
Descriptor: Hirudin variant-1
Authors:Song, X, Mo, W, Liu, X, Yan, X, Song, H, Dai, L.
Deposit date:2007-03-14
Release date:2008-03-18
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:The NMR solution structure of recombinant RGD-hirudin
Biochem.Biophys.Res.Commun., 360, 2007
6SJ0
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BU of 6sj0 by Molmil
Amidohydrolase, AHS
Descriptor: Amidohydrolase, BICARBONATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
4I42
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BU of 4i42 by Molmil
E.coli. 1,4-dihydroxy-2-naphthoyl coenzyme A synthase (ecMenB) in complex with 1-hydroxy-2-naphthoyl-CoA
Descriptor: 1,2-ETHANEDIOL, 1,4-Dihydroxy-2-naphthoyl-CoA synthase, 1-hydroxy-2-naphthoyl-CoA, ...
Authors:Sun, Y, Song, H, Li, J, Li, Y, Jiang, M, Zhou, J, Guo, Z.
Deposit date:2012-11-27
Release date:2013-05-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.848 Å)
Cite:Structural basis of the induced-fit mechanism of 1,4-dihydroxy-2-naphthoyl coenzyme A synthase from the crotonase fold superfamily
Plos One, 8, 2013
4ELS
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BU of 4els by Molmil
Structure of E. Coli. 1,4-dihydroxy-2- naphthoyl coenzyme A synthases (MENB) in complex with bicarbonate
Descriptor: 1,2-ETHANEDIOL, 1,4-Dihydroxy-2-naphthoyl-CoA synthase, BICARBONATE ION, ...
Authors:Sun, Y.R, Song, H.G, Li, J, Jiang, M, Li, Y, Zhou, J.H, Guo, Z.H.
Deposit date:2012-04-11
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.303 Å)
Cite:Active site binding and catalytic role of bicarbonate in 1,4-dihydroxy-2-naphthoyl coenzyme A synthases from vitamin K biosynthetic pathways
Biochemistry, 51, 2012
1NHL
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BU of 1nhl by Molmil
SNAP-23N Structure
Descriptor: Synaptosomal-associated protein 23
Authors:Freedman, S.J, Song, H.K, Xu, Y, Eck, M.J.
Deposit date:2002-12-19
Release date:2003-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Homotetrameric Structure of the SNAP-23 N-terminal Coiled-coil Domain
J.Biol.Chem., 278, 2003
6SJ2
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BU of 6sj2 by Molmil
Amidohydrolase, AHS with 3-HAA
Descriptor: 3-HYDROXYANTHRANILIC ACID, Amidohydrolase, GLYCEROL, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SIW
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BU of 6siw by Molmil
PaaK family AMP-ligase with AMP
Descriptor: 1,2-ETHANEDIOL, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, ADENOSINE MONOPHOSPHATE, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
8GV6
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BU of 8gv6 by Molmil
Crystal structure of PN-SIA28 in complex with influenza hemagglutinin H14 (A/long-tailed duck/Wisconsin/10OS3912/2010)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin H14-HA1, ...
Authors:Chen, Y, Song, H, Qi, J, Gao, G.F.
Deposit date:2022-09-14
Release date:2022-12-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes.
Nat Commun, 13, 2022
3WDH
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BU of 3wdh by Molmil
Crystal structure of Pullulanase from Anoxybacillus sp. LM18-11
Descriptor: CALCIUM ION, Type I pullulanase
Authors:Xu, J, Ren, F, Huang, C.H, Zheng, Y, Zhen, J, Ko, T.P, Chen, C.C, Chan, H.C, Guo, R.T, Ma, Y, Song, H.
Deposit date:2013-06-18
Release date:2014-06-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Cloning, Expression, Functional and Structural Studies of Pullulanase from Anoxybacillus sp. LM18-11
To be Published
3WDI
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BU of 3wdi by Molmil
Crystal structure of Pullulanase complexed with maltotriose from Anoxybacillus sp. LM18-11
Descriptor: CALCIUM ION, Type I pullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Xu, J, Ren, F, Huang, C.H, Zheng, Y, Zhen, J, Ko, T.P, Chen, C.C, Chan, H.C, Guo, R.T, Ma, Y, Song, H.
Deposit date:2013-06-18
Release date:2014-06-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Cloning, Expression, Functional and Structural Studies of Pullulanase from Anoxybacillus sp. LM18-11
To be Published
6SIX
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BU of 6six by Molmil
PaaK family AMP-ligase with ANP
Descriptor: 1,2-ETHANEDIOL, AMP-dependent synthetase and ligase, CITRATE ANION, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
1Q67
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BU of 1q67 by Molmil
Crystal structure of Dcp1p
Descriptor: Decapping protein involved in mRNA degradation-Dcp1p
Authors:She, M, Decker, C.J, Liu, Y, Chen, N, Parker, R, Song, H.
Deposit date:2003-08-12
Release date:2004-03-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Dcp1p and its functional implications in mRNA decapping
Nat.Struct.Mol.Biol., 11, 2004
6SIZ
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BU of 6siz by Molmil
PaaK family AMP-ligase with ANP and substrate
Descriptor: 1,2-ETHANEDIOL, 3-HYDROXYANTHRANILIC ACID, AMP-dependent synthetase and ligase, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SJ3
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BU of 6sj3 by Molmil
Amidohydrolase, AHS with 3-HBA
Descriptor: 1,2-ETHANEDIOL, 3-HYDROXYBENZOIC ACID, Amidohydrolase, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6SIY
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BU of 6siy by Molmil
PaaK family AMP-ligase with AMP and substrate
Descriptor: 1,2-ETHANEDIOL, 3-HYDROXYANTHRANILIC ACID, ADENOSINE MONOPHOSPHATE, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6TM4
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BU of 6tm4 by Molmil
NatL2 in complex with two molecules of salicylic acid
Descriptor: 2-HYDROXYBENZOIC ACID, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-12-03
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
3WDJ
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BU of 3wdj by Molmil
Crystal structure of Pullulanase complexed with maltotetraose from Anoxybacillus sp. LM18-11
Descriptor: CALCIUM ION, Type I pullulanase, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Xu, J, Ren, F, Huang, C.H, Zheng, Y, Zhen, J, Ko, T.P, Chen, C.C, Chan, H.C, Guo, R.T, Ma, Y, Song, H.
Deposit date:2013-06-18
Release date:2014-04-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Cloning, Expression, Functional and Structural Studies of Pullulanase from Anoxybacillus sp. LM18-11
To be Published
5WT9
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BU of 5wt9 by Molmil
Complex structure of PD-1 and nivolumab-Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Nivolumab, Light Chain of Nivolumab, ...
Authors:Tan, S, Zhang, H, Chai, Y, Song, H, Tong, Z, Wang, Q, Qi, J, Wong, G, Zhu, X, Liu, W.J, Gao, S, Wang, Z, Shi, Y, Yang, F, Gao, G.F, Yan, J.
Deposit date:2016-12-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:An unexpected N-terminal loop in PD-1 dominates binding by nivolumab.
Nat Commun, 8, 2017
4ELX
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BU of 4elx by Molmil
Structure of apo E.coli. 1,4-dihydroxy-2- naphthoyl CoA synthases with Cl
Descriptor: 1,2-ETHANEDIOL, 1,4-Dihydroxy-2-naphthoyl-CoA synthase, CHLORIDE ION, ...
Authors:Sun, Y.R, Song, H.G, Li, J, Jiang, M, Li, Y, Zhou, J.H, Guo, Z.H.
Deposit date:2012-04-11
Release date:2012-06-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.191 Å)
Cite:Active site binding and catalytic role of bicarbonate in 1,4-dihydroxy-2-naphthoyl coenzyme A synthases from vitamin K biosynthetic pathways
Biochemistry, 51, 2012
1R5O
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BU of 1r5o by Molmil
crystal structure analysis of sup35 complexed with GMPPNP
Descriptor: Eukaryotic peptide chain release factor GTP-binding subunit, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Kong, C, Song, H.
Deposit date:2003-10-11
Release date:2004-05-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure and functional analysis of the eukaryotic class II release factor eRF3 from S. pombe
Mol.Cell, 14, 2004
4EMH
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BU of 4emh by Molmil
Crystal structure of SpLsm4
Descriptor: Probable U6 snRNA-associated Sm-like protein LSm4
Authors:Jiang, S.M, Wu, D.H, Song, H.W.
Deposit date:2012-04-12
Release date:2012-06-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe.
Plos One, 7, 2012

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