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PDB: 458 results

4GQV
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Crystal structure of CBS-pair protein, CBSX1 from Arabidopsis thaliana
Descriptor: CBS domain-containing protein CBSX1, chloroplastic
Authors:Jeong, B.-C, Park, S.H, Yoo, K.S, Shin, J.S, Song, H.K.
Deposit date:2012-08-24
Release date:2013-01-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.392 Å)
Cite:Crystal structure of the single cystathionine beta-synthase domain-containing protein CBSX1 from Arabidopsis thaliana
Biochem.Biophys.Res.Commun., 430, 2013
2GK6
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BU of 2gk6 by Molmil
Structural and Functional insights into the human Upf1 helicase core
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Cheng, Z, Muhlrad, D, Parker, R, Song, H.
Deposit date:2006-03-31
Release date:2007-01-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional insights into the human Upf1 helicase core
Embo J., 26, 2007
4KOL
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BU of 4kol by Molmil
The structure of hemagglutinin from avian-origin H7N9 influenza virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, Hemagglutinin HA2
Authors:Shi, Y, Zhang, W, Wang, F, Qi, J, Song, H, Wu, Y, Gao, F, Zhang, Y, Fan, Z, Gong, W, Wang, D, Shu, Y, Wang, Y, Yan, J, Gao, G.F.
Deposit date:2013-05-12
Release date:2013-11-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Structures and receptor binding of hemagglutinins from human-infecting H7N9 influenza viruses.
Science, 342, 2013
2QKM
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BU of 2qkm by Molmil
The crystal structure of fission yeast mRNA decapping enzyme Dcp1-Dcp2 complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, SPAC19A8.12 protein, SPBC3B9.21 protein
Authors:She, M, Song, H.
Deposit date:2007-07-11
Release date:2008-04-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of dcp2 recognition and activation by dcp1.
Mol.Cell, 29, 2008
5K5U
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BU of 5k5u by Molmil
Crystal structure of N-terminal amidase
Descriptor: Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K63
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BU of 5k63 by Molmil
Crystal structure of N-terminal amidase C187S
Descriptor: ASPARAGINE, GLYCINE, Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K60
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BU of 5k60 by Molmil
Crystal structure of N-terminal amidase with Gln-Val peptide
Descriptor: GLUTAMINE, Nta1p, VALINE
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
3NIJ
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BU of 3nij by Molmil
The structure of UBR box (HIAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide HIAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3NIT
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BU of 3nit by Molmil
The structure of UBR box (native1)
Descriptor: E3 ubiquitin-protein ligase UBR1, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
5K66
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BU of 5k66 by Molmil
Crystal structure of N-terminal amidase with Asn-Glu peptide
Descriptor: ASPARAGINE, GLUTAMIC ACID, Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K62
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BU of 5k62 by Molmil
Crystal structure of N-terminal amidase C187S
Descriptor: ASPARAGINE, Nta1p, VALINE
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-01-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K61
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BU of 5k61 by Molmil
Crystal structure of N-terminal amidase with Gln-Gly peptide
Descriptor: GLUTAMINE, Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-04-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5K5V
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BU of 5k5v by Molmil
Crystal structure of N-terminal amidase C187S
Descriptor: Nta1p
Authors:Kim, M.K, Oh, S.-J, Lee, B.-G, Song, H.K.
Deposit date:2016-05-24
Release date:2017-04-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.947 Å)
Cite:Structural basis for dual specificity of yeast N-terminal amidase in the N-end rule pathway.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
2KSM
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BU of 2ksm by Molmil
Central B domain of Rv0899 from Mycobacterium tuberculosis
Descriptor: MYCOBACTERIUM TUBERCULOSIS RV0899/MT0922/OmpATb
Authors:Teriete, P, Yao, Y, Kolodzik, A, Yu, J, Song, H, Niederweis, M, Marassi, F.M.
Deposit date:2010-01-07
Release date:2010-02-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Mycobacterium tuberculosis Rv0899 adopts a mixed alpha/beta-structure and does not form a transmembrane beta-barrel.
Biochemistry, 49, 2010
3MCA
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BU of 3mca by Molmil
Structure of the Dom34-Hbs1 Complex and implications for its role in No-Go decay
Descriptor: Elongation factor 1 alpha-like protein, Protein dom34
Authors:Chen, L, Song, H.
Deposit date:2010-03-28
Release date:2010-10-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structure of the Dom34-Hbs1 complex and implications for no-go decay
Nat.Struct.Mol.Biol., 17, 2010
3NIH
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BU of 3nih by Molmil
The structure of UBR box (RIAAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RIAAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3PO0
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BU of 3po0 by Molmil
Crystal structure of SAMP1 from Haloferax volcanii
Descriptor: ACETATE ION, CADMIUM ION, MAGNESIUM ION, ...
Authors:Jeong, Y.J, Jeong, B.-C, Song, H.K.
Deposit date:2010-11-21
Release date:2011-03-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of ubiquitin-like small archaeal modifier protein 1 (SAMP1) from Haloferax volcanii.
Biochem.Biophys.Res.Commun., 405, 2011
3NII
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BU of 3nii by Molmil
The structure of UBR box (KIAA)
Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide KIAA, ZINC ION
Authors:Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
Deposit date:2010-06-16
Release date:2010-09-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
3R1M
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BU of 3r1m by Molmil
Structure of bifunctional fructose 1,6-bisphosphate aldolase/phosphatase (aldolase form)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,3-DIHYDROXYACETONEPHOSPHATE, MAGNESIUM ION, ...
Authors:Fushinobu, S, Nishimasu, H, Hattori, D, Song, H.-J, Wakagi, T.
Deposit date:2011-03-10
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for the bifunctionality of fructose-1,6-bisphosphate aldolase/phosphatase.
Nature, 478, 2011
3RUJ
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BU of 3ruj by Molmil
Crystal Structure of N-terminal region of yeast Atg7
Descriptor: Ubiquitin-like modifier-activating enzyme ATG7
Authors:Hong, S.B, Kim, B.W, Song, H.K.
Deposit date:2011-05-05
Release date:2011-11-23
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights into noncanonical E1 enzyme activation from the structure of autophagic E1 Atg7 with Atg8.
Nat.Struct.Mol.Biol., 18, 2011
3RUI
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BU of 3rui by Molmil
Crystal structure of Atg7C-Atg8 complex
Descriptor: Autophagy-related protein 8, Ubiquitin-like modifier-activating enzyme ATG7, ZINC ION
Authors:Hong, S.B, Kim, B.W, Song, H.K.
Deposit date:2011-05-05
Release date:2011-11-23
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (1.906 Å)
Cite:Insights into noncanonical E1 enzyme activation from the structure of autophagic E1 Atg7 with Atg8.
Nat.Struct.Mol.Biol., 18, 2011
2H8G
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BU of 2h8g by Molmil
5'-Methylthioadenosine Nucleosidase from Arabidopsis thaliana
Descriptor: 5'-Methylthioadenosine Nucleosidase, ADENINE
Authors:Park, E.Y, Oh, S.I, Nam, M.J, Shin, J.S, Kim, K.N, Song, H.K.
Deposit date:2006-06-07
Release date:2006-10-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of 5'-methylthioadenosine nucleosidase from Arabidopsis thaliana at 1.5-A resolution
Proteins, 65, 2006
2GJK
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BU of 2gjk by Molmil
Structural and functional insights into the human Upf1 helicase core
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Regulator of nonsense transcripts 1
Authors:Cheng, Z, Muhlrad, D, Parker, R, Song, H.
Deposit date:2006-03-31
Release date:2007-01-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional insights into the human Upf1 helicase core
Embo J., 26, 2007
2WKG
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BU of 2wkg by Molmil
Nostoc punctiforme Debranching Enzyme (NPDE)(Native form)
Descriptor: ALPHA AMYLASE, CATALYTIC REGION
Authors:Dumbrepatil, A.B, Choi, J.H, Song, H.N, Park, K.H, Woo, E.J.
Deposit date:2009-06-11
Release date:2009-09-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Features of the Nostoc Punctiforme Debranching Enzyme Reveal the Basis of its Mechanism and Substrate Specificity.
Proteins, 78, 2010
2WC7
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BU of 2wc7 by Molmil
Crystal structure of Nostoc Punctiforme Debranching Enzyme(NPDE)(Acarbose soaked)
Descriptor: ALPHA AMYLASE, CATALYTIC REGION
Authors:Dumbrepatil, A.-B, Song, H.-N, Choi, J.-H, Park, K.-H, Woo, E.-J.
Deposit date:2009-03-10
Release date:2009-09-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural Features of the Nostoc Punctiforme Debranching Enzyme Reveal the Basis of its Mechanism and Substrate Specificity.
Proteins, 78, 2010

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