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PDB: 1919 件

5SZD
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BU of 5szd by Molmil
Crystal structure of Aquifex aeolicus Hfq at 1.5A
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
著者Stanek, K, Patterson, J, Randolph, P.S, Mura, C.
登録日2016-08-13
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.494 Å)
主引用文献Crystal structure and RNA-binding properties of an Hfq homolog from the deep-branching Aquificae: conservation of the lateral RNA-binding mode.
Acta Crystallogr D Struct Biol, 73, 2017
3J2J
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BU of 3j2j by Molmil
Empty coxsackievirus A9 capsid
分子名称: Protein VP1, Protein VP2, Protein VP3
著者Shakeel, S, Seitsonen, J.J.T, Kajander, T, Laurinmaki, P, Hyypia, T, Susi, P, Butcher, S.J.
登録日2012-10-04
公開日2013-07-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.54 Å)
主引用文献Structural and functional analysis of coxsackievirus A9 integrin {alpha}v{beta}6 binding and uncoating.
J.Virol., 87, 2013
5VCH
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BU of 5vch by Molmil
Crystal structure of full-length Kluyveromyces lactis Kap123
分子名称: Kap123
著者An, S, Yoon, J, Song, J.-J, Cho, U.-S.
登録日2017-03-31
公開日2017-11-01
最終更新日2022-03-16
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure-based nuclear import mechanism of histones H3 and H4 mediated by Kap123.
Elife, 6, 2017
1XI3
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Thiamine phosphate pyrophosphorylase from Pyrococcus furiosus Pfu-1255191-001
分子名称: NICKEL (II) ION, SULFATE ION, Thiamine phosphate pyrophosphorylase, ...
著者Zhou, W, Chen, L, Tempel, W, Liu, Z.-J, Habel, J, Lee, D, Lin, D, Chang, S.-H, Dillard, B.D, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Kelley, L.-L.C, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Adams, M.W.W, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-09-21
公開日2004-09-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Thiamine phosphate pyrophosphorylase from Pyrococcus furiosus Pfu-1255191-001
To be published
7JPJ
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BU of 7jpj by Molmil
Crystal Structure of the essential dimeric LYSA from Phaeodactylum tricornutum
分子名称: D-LYSINE, Diaminopimelate decarboxylase, SULFATE ION
著者Fedorov, E, Belinski, V.A, Brunson, J.K, Almo, S.C, Dupont, C.L, Ghosh, A.
登録日2020-08-08
公開日2021-06-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献The Phaeodactylum tricornutum diaminopimelate decarboxylase was acquired via horizontal gene transfer from bacteria and displays substrate promiscuity
Biorxiv, 2020
7MSY
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BU of 7msy by Molmil
Structure of CalU17 from the Calicheamicin Biosynthesis Pathway of Micromonospora echinospora
分子名称: CALCIUM ION, CHLORIDE ION, CalU17, ...
著者Kosgei, A.J, Miller, M.D, Xu, W, Van Lanen, S.G, Thorson, J.S, Phillips Jr, G.N.
登録日2021-05-12
公開日2021-07-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The crystal structure of DynF from the dynemicin-biosynthesis pathway of Micromonospora chersina.
Acta Crystallogr.,Sect.F, 78, 2022
1XX7
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Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001
分子名称: NICKEL (II) ION, UNKNOWN ATOM OR ION, oxetanocin-like protein
著者Chen, L, Tempel, W, Habel, J, Zhou, W, Nguyen, D, Chang, S.-H, Lee, D, Kelley, L.-L.C, Dillard, B.D, Liu, Z.-J, Bridger, S, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-11-04
公開日2004-12-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.261 Å)
主引用文献Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001
To be published
4CAS
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BU of 4cas by Molmil
Serial femtosecond crystallography structure of a photosynthetic reaction center
分子名称: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL A, ...
著者Johansson, L.C, Arnlund, D, Katona, G, White, T.A, Barty, A, DePonte, D.P, Shoeman, R.L, Wickstrand, C, Sharma, A, Williams, G.J, Aquila, A, Bogan, M.J, Caleman, C, Davidsson, J, Doak, R.B, Frank, M, Fromme, R, Galli, L, Grotjohann, I, Hunter, M.S, Kassemeyer, S, Kirian, R.A, Kupitz, C, Liang, M, Lomb, L, Malmerberg, E, Martin, A.V, Messerschmidt, M, Nass, K, Redecke, L, Seibert, M.M, Sjohamn, J, Steinbrener, J, Stellato, F, Wang, D, Wahlgren, W.Y, Weierstall, U, Westenhoff, S, Zatsepin, N.A, Boutet, S, Spence, J.C.H, Schlichting, I, Chapman, H.N, Fromme, P, Neutze, R.
登録日2013-10-09
公開日2013-12-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of a photosynthetic reaction centre determined by serial femtosecond crystallography.
Nat Commun, 4, 2013
1YEM
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BU of 1yem by Molmil
Conserved hypothetical protein Pfu-838710-001 from Pyrococcus furiosus
分子名称: Conserved hypothetical protein Pfu-838710-001, PLATINUM (II) ION, UNKNOWN ATOM OR ION
著者Yang, H, Chang, J, Shah, A, Ng, J.D, Liu, Z.-J, Chen, L, Lee, D, Tempel, W, Praissman, J.L, Lin, D, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Jenney Jr, F.E, Adams, M.W.W, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-12-28
公開日2005-01-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conserved hypothetical protein Pfu-838710-001 from Pyrococcus furiosus
To be published
5VE8
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BU of 5ve8 by Molmil
Crystal structure of full-length Kluyveromyces lactis Kap123 with histone H3 1-28
分子名称: Histone H3, Kap123
著者An, S, Yoon, J, Song, J.-J, Cho, U.-S.
登録日2017-04-04
公開日2017-11-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-based nuclear import mechanism of histones H3 and H4 mediated by Kap123.
Elife, 6, 2017
7LCY
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BU of 7lcy by Molmil
Crystal structure of the ligand-free ARM domain from Drosophila SARM1
分子名称: Isoform B of NAD(+) hydrolase sarm1
著者Gu, W, Nanson, J.D, Luo, Z, McGuinness, H.Y, Manik, M.K, Jia, X, Ve, T, Kobe, B.
登録日2021-01-12
公開日2021-03-10
最終更新日2021-04-21
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献SARM1 is a metabolic sensor activated by an increased NMN/NAD + ratio to trigger axon degeneration.
Neuron, 109, 2021
6BRR
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BU of 6brr by Molmil
Crystal structure of DNMT3A (R836A)-DNMT3L in complex with DNA containing two CpG sites
分子名称: DNA (25-MER), DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3A, ...
著者Zhang, Z.M, Song, J.
登録日2017-11-30
公開日2018-01-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Structural basis for DNMT3A-mediated de novo DNA methylation.
Nature, 554, 2018
1S1K
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BU of 1s1k by Molmil
INFLUENCE OF GROOVE INTERACTIONS ON DNA HOLLIDAY JUNCTION FORMATION
分子名称: 5'-D(*CP*CP*(1AP)P*GP*TP*AP*CP*TP*GP*G)-3', CALCIUM ION, SODIUM ION
著者Hays, F.A, Watson, J, Ho, P.S.
登録日2004-01-06
公開日2004-08-31
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Influence of minor groove substituents on the structure of DNA holliday junctions.
Biochemistry, 43, 2004
4NPF
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BU of 4npf by Molmil
High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker
分子名称: Immunoglobulin G-binding protein A
著者Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
登録日2013-11-21
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
2FSY
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BU of 2fsy by Molmil
Bacteriophage HK97 Pepsin-treated Expansion Intermediate IV
分子名称: major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-23
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FRP
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BU of 2frp by Molmil
Bacteriophage HK97 Expansion Intermediate IV
分子名称: Major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-19
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (7.5 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FT1
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BU of 2ft1 by Molmil
Bacteriophage HK97 Head II
分子名称: major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-23
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
2FS3
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BU of 2fs3 by Molmil
Bacteriophage HK97 K169Y Head I
分子名称: Major capsid protein
著者Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E.
登録日2006-01-20
公開日2006-02-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM.
Structure, 14, 2006
5DU2
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BU of 5du2 by Molmil
Structural analysis of EspG2 glycosyltransferase
分子名称: EspG2 glycosyltransferase
著者Michalska, K, Elshahawi, S.I, Bigelow, L, Babnigg, G, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-09-18
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural analysis of EspG2 glycosyltransferase
To Be Published
1IKI
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BU of 1iki by Molmil
COMPLEX OF STREPTOMYCES R61 DD-PEPTIDASE WITH THE PRODUCTS OF A SPECIFIC PEPTIDOGLYCAN SUBSTRATE FRAGMENT
分子名称: D-ALANINE, D-ALANYL-D-ALANINE CARBOXYPEPTIDASE, GLYCYL-L-ALPHA-AMINO-EPSILON-PIMELYL-D-ALANINE
著者Mcdonough, M.A, Anderson, J.W, Silvaggi, N.R, Pratt, R.F, Knox, J.R, Kelly, J.A.
登録日2001-05-03
公開日2002-09-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structures of two kinetic intermediates reveal species specificity of penicillin-binding proteins.
J.Mol.Biol., 322, 2002
5TDV
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BU of 5tdv by Molmil
Intermediate O2 diiron complex in the Q228A variant of Toluene 4-moonoxygenase (T4moHD)
分子名称: FE (III) ION, PEROXIDE ION, Toluene-4-monooxygenase system protein A, ...
著者Bailey, L.J, Acheson, J.F, Fox, B.G.
登録日2016-09-19
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献In-crystal reaction cycle of a toluene-bound diiron hydroxylase.
Nature, 544, 2017
7KUH
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BU of 7kuh by Molmil
MicroED structure of mVDAC
分子名称: Voltage-dependent anion-selective channel protein 1
著者Martynowycz, M.W, Khan, F, Hattne, J, Abramson, J, Gonen, T.
登録日2020-11-25
公開日2020-12-23
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (3.12 Å)
主引用文献MicroED structure of lipid-embedded mammalian mitochondrial voltage-dependent anion channel.
Proc.Natl.Acad.Sci.USA, 117, 2020
3IKK
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BU of 3ikk by Molmil
Crystal structure analysis of msp domain
分子名称: Vesicle-associated membrane protein-associated protein B/C
著者Shi, J, Lua, S, Song, J.
登録日2009-08-06
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Elimination of the native structure and solubility of the hVAPB MSP domain by the Pro56Ser mutation that causes amyotrophic lateral sclerosis.
Biochemistry, 49, 2010
5UAB
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BU of 5uab by Molmil
MET Tyrosine Kinase Inhibition Enhances the Antitumor Efficacy of an HGF Antibody
分子名称: CHLORIDE ION, GLYCEROL, Hepatocyte growth factor receptor, ...
著者Hoffman, I.D, Lawson, J.D.
登録日2016-12-19
公開日2017-05-31
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献MET Tyrosine Kinase Inhibition Enhances the Antitumor Efficacy of an HGF Antibody.
Mol. Cancer Ther., 16, 2017
4LKM
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BU of 4lkm by Molmil
Crystal structure of Plk1 Polo-box domain in complex with PL-74
分子名称: GLYCEROL, PL-74, SULFATE ION, ...
著者Lee, W.C, Song, J.H, Kim, H.Y.
登録日2013-07-08
公開日2013-12-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Exploring the binding nature of pyrrolidine pocket-dependent interactions in the polo-box domain of polo-like kinase 1
Plos One, 8, 2013

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