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PDB: 1135 件
4E1U
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[Ru(bpy)2 dppz]2+ bound to DNA
分子名称: 5'-D(*CP*GP*GP*AP*AP*AP*TP*TP*AP*CP*CP*G)-3', BARIUM ION, Delta-[Ru(bpy)2dppz]2+
著者Song, H, Kaiser, J.T, Barton, J.K.
登録日2012-03-07
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (0.92 Å)
主引用文献Crystal structure of delta-[Ru(bpy)2dppz]2+ bound to mismatched DNA reveals side-by-side metalloinsertion and intercalation.
Nat Chem, 4, 2012
2DS5
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BU of 2ds5 by Molmil
Structure of the ZBD in the orthorhomibic crystal from
分子名称: ATP-dependent Clp protease ATP-binding subunit clpX, CALCIUM ION, TETRAETHYLENE GLYCOL, ...
著者Song, H.K, Park, E.Y, Lee, B.G, Hong, S.B.
登録日2006-06-22
公開日2007-02-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Basis of SspB-tail Recognition by the Zinc Binding Domain of ClpX.
J.Mol.Biol., 367, 2007
4I52
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scMenB im complex with 1-hydroxy-2-naphthoyl-CoA
分子名称: 1-hydroxy-2-naphthoyl-CoA, CHLORIDE ION, Naphthoate synthase
著者Song, H.G, Sun, Y.R, Li, J, Li, Y, Jiang, M, Zhou, J.H, Guo, Z.H.
登録日2012-11-28
公開日2013-05-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis of the induced-fit mechanism of 1,4-dihydroxy-2-naphthoyl coenzyme a synthase from the crotonase fold superfamily
Plos One, 8, 2013
4I4Z
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Synechocystis sp. PCC 6803 1,4-dihydroxy-2-naphthoyl-coenzyme A synthase (MenB) in complex with salicylyl-CoA
分子名称: BICARBONATE ION, MALONATE ION, Naphthoate synthase, ...
著者Song, H.G, Sun, Y.R, Li, J, Li, Y, Jiang, M, Zhou, J.H, Guo, Z.H.
登録日2012-11-28
公開日2013-05-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the induced-fit mechanism of 1,4-dihydroxy-2-naphthoyl coenzyme a synthase from the crotonase fold superfamily
Plos One, 8, 2013
3PJV
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BU of 3pjv by Molmil
Structure of Pseudomonas fluorescence LapD periplasmic domain
分子名称: Cyclic dimeric GMP binding protein
著者Sondermann, H, Navarro, M.V.A.S, Chatterjee, D.
登録日2010-11-10
公開日2011-02-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7727 Å)
主引用文献Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
3PJW
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Structure of Pseudomonas fluorescence LapD GGDEF-EAL dual domain, I23
分子名称: Cyclic dimeric GMP binding protein
著者Sondermann, H, Navarro, M.V.A.S.
登録日2010-11-10
公開日2011-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.1006 Å)
主引用文献Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
1Q9C
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BU of 1q9c by Molmil
Crystal Structure of the Histone domain of Son of Sevenless
分子名称: Son of sevenless protein
著者Sondermann, H, Soisson, S.M, Bar-Sagi, D, Kuriyan, J.
登録日2003-08-24
公開日2003-12-09
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Tandem Histone Folds in the Structure of the N-terminal Segment of the Ras Activator Son of Sevenless
Structure, 11, 2003
3NJ2
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BU of 3nj2 by Molmil
Crystal structure of cce_0566 from the cyanobacterium Cyanothece 51142, a protein associated with nitrogen fixation from the DUF269 family
分子名称: DUF269-containing protein
著者Robinson, H, Ralston, C.Y, Addlagatta, A, Buchko, G.W.
登録日2010-06-16
公開日2010-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Crystal structure of cce_0566 from Cyanothece 51142, a protein associated with nitrogen fixation in the DUF269 family.
Febs Lett., 586, 2012
3PJT
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Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, C2221
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Cyclic dimeric GMP binding protein
著者Sondermann, H, Navarro, M.V.A.S, Krasteva, P.
登録日2010-11-10
公開日2011-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5154 Å)
主引用文献Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
3PJU
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Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, P6522
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Cyclic dimeric GMP binding protein
著者Sondermann, H, Navarro, M.V.A.S, Krasteva, P.
登録日2010-11-10
公開日2011-02-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4991 Å)
主引用文献Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis.
Plos Biol., 9, 2011
1VJS
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STRUCTURE OF ALPHA-AMYLASE PRECURSOR
分子名称: ALPHA-AMYLASE
著者Song, H.K, Hwang, K.Y, Chang, C, Suh, S.W.
登録日1996-10-02
公開日1997-03-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of thermostable alpha-amylase from Bacillus licheniformis refined at 1.7 A resolution
Mol.Cell, 7, 1997
1OOW
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The crystal structure of the spinach plastocyanin double mutant G8D/L12E gives insight into its low reactivity towards photosystem 1 and cytochrome f
分子名称: COPPER (II) ION, Plastocyanin, chloroplast
著者Jansson, H, Okvist, M, Jacobson, F, Ejdeback, M, Hansson, O, Sjolin, L.
登録日2003-03-04
公開日2004-02-17
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the spinach plastocyanin double mutant G8D/L12E gives insight into its low reactivity towards photosystem 1 and cytochrome f.
Biochim.Biophys.Acta, 1607, 2003
2C8T
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The 3.0 A Resolution Structure of Caseinolytic Clp Protease 1 from Mycobacterium tuberculosis
分子名称: ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1
著者Ingvarsson, H, Hogbom, M, Jones, T.A, Unge, T.
登録日2005-12-07
公開日2007-02-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Insights Into the Inter-Ring Plasticity of Caseinolytic Proteases from the X-Ray Structure of Mycobacterium Tuberculosis Clpp1.
Acta Crystallogr.,Sect.D, 63, 2007
1KE5
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BU of 1ke5 by Molmil
CDK2 complexed with N-methyl-4-{[(2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]amino}benzenesulfonamide
分子名称: Cell division protein kinase 2, N-METHYL-4-{[(2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]AMINO}BENZENESULFONAMIDE
著者Bramson, H.N, Corona, J, Davis, S.T, Dickerson, S.H, Edelstein, M, Frye, S.V, Gampe, R.T, Hassell, A.M, Shewchuk, L.M, Kuyper, L.F.
登録日2001-11-14
公開日2002-05-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Oxindole-based inhibitors of cyclin-dependent kinase 2 (CDK2): design, synthesis, enzymatic activities, and X-ray crystallographic analysis.
J.Med.Chem., 44, 2001
1KE7
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CYCLIN-DEPENDENT KINASE 2 (CDK2) COMPLEXED WITH 3-{[(2,2-DIOXIDO-1,3-DIHYDRO-2-BENZOTHIEN-5-YL)AMINO]METHYLENE}-5-(1,3-OXAZOL-5-YL)-1,3-DIHYDRO-2H-INDOL-2-ONE
分子名称: 3-{[(2,2-DIOXIDO-1,3-DIHYDRO-2-BENZOTHIEN-5-YL)AMINO]METHYLENE}-5-(1,3-OXAZOL-5-YL)-1,3-DIHYDRO-2H-INDOL-2-ONE, Cell division protein kinase 2
著者Bramson, H.N, Corona, J, Davis, S.T, Dickerson, S.H, Edelstein, M, Frye, S.V, Gampe, R.T, Hassell, A.H, Shewchuk, L.M, Kuyper, L.F.
登録日2001-11-14
公開日2002-05-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Oxindole-based inhibitors of cyclin-dependent kinase 2 (CDK2): design, synthesis, enzymatic activities, and X-ray crystallographic analysis.
J.Med.Chem., 44, 2001
1I3W
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BU of 1i3w by Molmil
ACTINOMYCIN D BINDING TO CGATCGATCG
分子名称: 5'-D(*C*GP*AP*TP*CP*GP*AP*(BRU)P*CP*GP)-3', ACTINOMYCIN D
著者Robinson, H, Gao, Y.-G, Yang, X.-L, Sanishvili, R, Joachimiak, A, Wang, A.H.-J.
登録日2001-02-17
公開日2001-05-21
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic Analysis of a Novel Complex of Actinomycin D Bound to the DNA Decamer Cgatcgatcg.
Biochemistry, 40, 2001
5T16
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Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA substrate analog
分子名称: 1,2-ETHANEDIOL, RNA substrate analog, Ribonuclease 3
著者Song, H, Ji, X.
登録日2016-08-18
公開日2017-02-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.783 Å)
主引用文献The Functional Cycle of Rnt1p: Five Consecutive Steps of Double-Stranded RNA Processing by a Eukaryotic RNase III.
Structure, 25, 2017
1KE9
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CYCLIN-DEPENDENT KINASE 2 (CDK2) COMPLEXED WITH 3-{[4-({[AMINO(IMINO)METHYL]AMINOSULFONYL)ANILINO]METHYLENE}-2-OXO-2,3-DIHYDRO-1H-INDOLE
分子名称: 3-{[4-([AMINO(IMINO)METHYL]AMINOSULFONYL)ANILINO]METHYLENE}-2-OXO-2,3-DIHYDRO-1H-INDOLE, Cell division protein kinase 2
著者Bramson, H.N, Corona, J, Davis, S.T, Dickerson, S.H, Edelstein, M, Frye, S.V, Gampe, R.T, Hassell, A.M, Shewchuk, L.M, Kuyper, L.F.
登録日2001-11-14
公開日2002-05-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Oxindole-based inhibitors of cyclin-dependent kinase 2 (CDK2): design, synthesis, enzymatic activities, and X-ray crystallographic analysis.
J.Med.Chem., 44, 2001
1KE8
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CYCLIN-DEPENDENT KINASE 2 (CDK2) COMPLEXED WITH 4-{[(2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]AMINO}-N-(1,3-THIAZOL-2-YL)BENZENESULFONAMIDE
分子名称: 4-{[(2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]AMINO}-N-(1,3-THIAZOL-2-YL)BENZENESULFONAMIDE, CELL DIVISION PROTEIN KINASE 2
著者Bramson, H.N, Corona, J, Davis, S.T, Dickerson, S.H, Edelstein, M, Frye, S.V, Gampe, R.T, Hassell, A.M, Shewchuk, L.M, Kuyper, L.F.
登録日2001-11-14
公開日2002-05-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Oxindole-based inhibitors of cyclin-dependent kinase 2 (CDK2): design, synthesis, enzymatic activities, and X-ray crystallographic analysis.
J.Med.Chem., 44, 2001
1KE6
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CYCLIN-DEPENDENT KINASE 2 (CDK2) COMPLEXED WITH N-METHYL-{4-[2-(7-OXO-6,7-DIHYDRO-8H-[1,3]THIAZOLO[5,4-E]INDOL-8-YLIDENE)HYDRAZINO]PHENYL}METHANESULFONAMIDE
分子名称: Cell division protein kinase 2, N-METHYL-{4-[2-(7-OXO-6,7-DIHYDRO-8H-[1,3]THIAZOLO[5,4-E]INDOL-8-YLIDENE)HYDRAZINO]PHENYL}METHANESULFONAMIDE
著者Bramson, H.N, Corona, J, Davis, S.T, Dickerson, S.H, Edelstein, M, Frye, S.V, Gampe, R.T, Hassell, A.H, Shewchuk, L.M, Kuyper, L.F.
登録日2001-11-14
公開日2002-05-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Oxindole-based inhibitors of cyclin-dependent kinase 2 (CDK2): design, synthesis, enzymatic activities, and X-ray crystallographic analysis.
J.Med.Chem., 44, 2001
1ALD
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BU of 1ald by Molmil
ACTIVITY AND SPECIFICITY OF HUMAN ALDOLASES
分子名称: ALDOLASE A
著者Watson, H.C.
登録日1991-05-05
公開日1992-01-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Activity and specificity of human aldolases.
J.Mol.Biol., 219, 1991
1OX9
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Crystal structure of SspB-ssrA complex
分子名称: Stringent starvation protein B, ssrA
著者Song, H.K, Eck, M.J.
登録日2003-04-01
公開日2003-08-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of degradation signal recognition by SspB, a specificity-enhancing factor for the ClpXP proteolytic machine
Mol.Cell, 12, 2003
1HSE
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H253M N TERMINAL LOBE OF HUMAN LACTOFERRIN
分子名称: CARBONATE ION, FE (III) ION, LACTOFERRIN
著者Nicholson, H, Anderson, B.F, Baker, E.N.
登録日1996-12-11
公開日1997-03-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mutagenesis of the histidine ligand in human lactoferrin: iron binding properties and crystal structure of the histidine-253-->methionine mutant.
Biochemistry, 36, 1997
2FJ8
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High resolution structure of barley Bowman-Birk inhibitor
分子名称: Bowman-Birk type trypsin inhibitor
著者Song, H.K.
登録日2006-01-02
公開日2006-01-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献High resolution structure of barley Bowman-Birk inhibitor
To be Published
1AZP
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
分子名称: DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3'), PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D)
著者Robinson, H, Gao, Y.-G, Mccrary, B.S, Edmondson, S.P, Shriver, J.W, Wang, A.H.-J.
登録日1997-11-19
公開日1999-01-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The hyperthermophile chromosomal protein Sac7d sharply kinks DNA.
Nature, 392, 1998

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