Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1137 件
5YPC
DownloadVisualize
BU of 5ypc by Molmil
p62/SQSTM1 ZZ domain with Phe-peptide
分子名称: 78 kDa glucose-regulated protein,Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.962 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YPB
DownloadVisualize
BU of 5ypb by Molmil
p62/SQSTM1 ZZ domain with His-peptide
分子名称: 78 kDa glucose-regulated protein,Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YPH
DownloadVisualize
BU of 5yph by Molmil
p62/SQSTM1 ZZ domain with Ile-peptide
分子名称: 78 kDa glucose-regulated protein,Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.629 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YSK
DownloadVisualize
BU of 5ysk by Molmil
SdeA mART-C domain EE/AA apo
分子名称: Ubiquitinating/deubiquitinating enzyme SdeA
著者Kim, L, Kwon, D.H, Song, H.K.
登録日2017-11-14
公開日2018-08-29
実験手法X-RAY DIFFRACTION (2.403 Å)
主引用文献Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila
J. Mol. Biol., 430, 2018
5YP8
DownloadVisualize
BU of 5yp8 by Molmil
p62/SQSTM1 ZZ domain with Arg-peptide
分子名称: 78 kDa glucose-regulated protein,Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.448 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YPG
DownloadVisualize
BU of 5ypg by Molmil
p62/SQSTM1 ZZ domain with Leu-peptide
分子名称: 78 kDa glucose-regulated protein,Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YPF
DownloadVisualize
BU of 5ypf by Molmil
p62/SQSTM1 ZZ domain with Trp-peptide
分子名称: 78 kDa glucose-regulated protein,Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.951 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YPE
DownloadVisualize
BU of 5ype by Molmil
p62/SQSTM1 ZZ domain with Tyr-peptide
分子名称: 78 kDa glucose-regulated protein,Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.851 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YPA
DownloadVisualize
BU of 5ypa by Molmil
p62/SQSTM1 ZZ domain with Lys-peptide
分子名称: 78 kDa glucose-regulated protein,Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YP7
DownloadVisualize
BU of 5yp7 by Molmil
p62/SQSTM1 ZZ domain
分子名称: Sequestosome-1, ZINC ION
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-11-01
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.424 Å)
主引用文献Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter.
Nat Commun, 9, 2018
5YSJ
DownloadVisualize
BU of 5ysj by Molmil
SdeA mART-C domain WT apo
分子名称: Ubiquitinating/deubiquitinating enzyme SdeA
著者Kim, L, Kwon, D.H, Song, H.K.
登録日2017-11-14
公開日2018-08-29
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.059 Å)
主引用文献Structural and Biochemical Study of the Mono-ADP-Ribosyltransferase Domain of SdeA, a Ubiquitylating/Deubiquitylating Enzyme from Legionella pneumophila
J. Mol. Biol., 430, 2018
5WT9
DownloadVisualize
BU of 5wt9 by Molmil
Complex structure of PD-1 and nivolumab-Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Nivolumab, Light Chain of Nivolumab, ...
著者Tan, S, Zhang, H, Chai, Y, Song, H, Tong, Z, Wang, Q, Qi, J, Wong, G, Zhu, X, Liu, W.J, Gao, S, Wang, Z, Shi, Y, Yang, F, Gao, G.F, Yan, J.
登録日2016-12-10
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献An unexpected N-terminal loop in PD-1 dominates binding by nivolumab.
Nat Commun, 8, 2017
5WZ1
DownloadVisualize
BU of 5wz1 by Molmil
Crystal structure of Zika virus NS5 methyltransferase bound to S-adenosyl-L-methionine
分子名称: NS5 methyltransferase, S-ADENOSYLMETHIONINE
著者Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2017-01-16
公開日2017-03-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.507 Å)
主引用文献The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
8GV6
DownloadVisualize
BU of 8gv6 by Molmil
Crystal structure of PN-SIA28 in complex with influenza hemagglutinin H14 (A/long-tailed duck/Wisconsin/10OS3912/2010)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin H14-HA1, ...
著者Chen, Y, Song, H, Qi, J, Gao, G.F.
登録日2022-09-14
公開日2022-12-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural basis for a human broadly neutralizing influenza A hemagglutinin stem-specific antibody including H17/18 subtypes.
Nat Commun, 13, 2022
5JST
DownloadVisualize
BU of 5jst by Molmil
MBP fused MDV1 coiled coil
分子名称: ACETATE ION, GLYCEROL, Maltose-binding periplasmic protein,Mitochondrial division protein 1, ...
著者Kim, B.-W, Song, H.K.
登録日2016-05-09
公開日2017-03-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献ACCORD: an assessment tool to determine the orientation of homodimeric coiled-coils.
Sci Rep, 7, 2017
5H3T
DownloadVisualize
BU of 5h3t by Molmil
m7G cap bound to GEMIN5-WD
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, GLYCEROL, Gem-associated protein 5
著者Bharath, S.R, Tang, X, Song, H.
登録日2016-10-27
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.571 Å)
主引用文献Structural basis for specific recognition of pre-snRNA by Gemin5
Cell Res., 26, 2016
5U7G
DownloadVisualize
BU of 5u7g by Molmil
Crystal Structure of the Catalytic Core of CBP
分子名称: CREB-binding protein, ZINC ION
著者Park, S, Stanfield, R.L, Martinez-Yamout, M.M, Dyson, H.J, Wilson, I.A, Wright, P.E.
登録日2016-12-12
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Role of the CBP catalytic core in intramolecular SUMOylation and control of histone H3 acetylation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5XV3
DownloadVisualize
BU of 5xv3 by Molmil
Crystal structure of ATG101-ATG13HORMA
分子名称: Autophagy-related protein 101, Autophagy-related protein 13, DI(HYDROXYETHYL)ETHER
著者Kim, B.-W, Song, H.K.
登録日2017-06-26
公開日2018-07-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation.
Autophagy, 14, 2018
4Z8U
DownloadVisualize
BU of 4z8u by Molmil
CRYSTAL STRUCTURE OF AvrRxo1-ORF1:-ORF2 WITH ATP
分子名称: ACETATE ION, AvrRxo1-ORF1, AvrRxo1-ORF2, ...
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
2HUF
DownloadVisualize
BU of 2huf by Molmil
Crystal structure of Aedes aegypti alanine glyoxylate aminotransferase
分子名称: 1-BUTANOL, Alanine glyoxylate aminotransferase
著者Han, Q, Robinson, H, Gao, Y.G, Vogelaar, N, Wilson, S.R, Rizzi, M, Li, J.
登録日2006-07-26
公開日2006-09-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structures of Aedes aegypti Alanine Glyoxylate Aminotransferase.
J.Biol.Chem., 281, 2006
5XAD
DownloadVisualize
BU of 5xad by Molmil
NLIR - LC3B fusion protein
分子名称: Microtubule-associated proteins 1A/1B light chain 3B, Uncharacterised protein
著者Kwon, D.H, Kim, L, Song, H.K.
登録日2017-03-12
公開日2017-07-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献A novel conformation of the LC3-interacting region motif revealed by the structure of a complex between LC3B and RavZ
Biochem. Biophys. Res. Commun., 490, 2017
4Z8T
DownloadVisualize
BU of 4z8t by Molmil
CRYSTAL STRUCTURE OF AvrRxo1-ORF1:AvrRxo1-ORF2 WITH SULPHATE IONS
分子名称: ACETATE ION, AvrRxo1-ORF1, AvrRxo1-ORF2, ...
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
4Z8V
DownloadVisualize
BU of 4z8v by Molmil
CRYSTAL STRUCTURE OF AVRRXO1-ORF1:-ORF2 COMPLEX, NATIVE.
分子名称: AvrRxo1-ORF1, AvrRxo1-ORF2, PHOSPHATE ION
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
7YE7
DownloadVisualize
BU of 7ye7 by Molmil
Crystal structure of SARS-CoV-2 soluble dimeric ORF9b
分子名称: N-OCTANE, ORF9b protein, nonane
著者Jin, X, Chai, Y, Qi, J, Song, H, Gao, G.F.
登録日2022-07-05
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural characterization of SARS-CoV-2 dimeric ORF9b reveals potential fold-switching trigger mechanism.
Sci China Life Sci, 66, 2023
2HUU
DownloadVisualize
BU of 2huu by Molmil
Crystal structure of Aedes aegypti alanine glyoxylate aminotransferase in complex with alanine
分子名称: 1-BUTANOL, ALANINE, Alanine glyoxylate aminotransferase
著者Han, Q, Robinson, H, Gao, Y.G, Vogelaar, N, Wilson, S.R, Rizzi, M, Li, J.
登録日2006-07-27
公開日2006-09-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structures of Aedes aegypti Alanine Glyoxylate Aminotransferase.
J.Biol.Chem., 281, 2006

224572

件を2024-09-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon