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PDB: 29 件

6XRK
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GH5-4 broad specificity endoglucanase from an uncultured bovine rumen ciliate
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-07-13
公開日2020-10-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.419 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
6XSO
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GH5-4 broad specificity endoglucanase from an uncultured bacterium
分子名称: (2S)-2-hydroxybutanedioic acid, Cellulase, DI(HYDROXYETHYL)ETHER, ...
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-07-15
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
6XSU
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BU of 6xsu by Molmil
GH5-4 broad specificity endoglucanase from Ruminococcus flavefaciens
分子名称: ETHANOL, GH5-4 broad specificity endoglucanase
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-07-16
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
7KD8
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BU of 7kd8 by Molmil
TtgR C137I I141W M167L F168Y mutant in complex with resveratrol
分子名称: HTH-type transcriptional regulator TtgR, MAGNESIUM ION, RESVERATROL
著者Bingman, C.A, Nishikawa, K.K, Smith, R.W, Raman, S.
登録日2020-10-08
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Epistasis shapes the fitness landscape of an allosteric specificity switch.
Nat Commun, 12, 2021
7K1A
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BU of 7k1a by Molmil
TtgR quadruple mutant (C137I I141W M167L F168Y)
分子名称: HTH-type transcriptional regulator TtgR, MAGNESIUM ION
著者Bingman, C.A, Nishikawa, K.K, Smith, R.W, Raman, S.
登録日2020-09-07
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Epistasis shapes the fitness landscape of an allosteric specificity switch.
Nat Commun, 12, 2021
7K1C
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BU of 7k1c by Molmil
TtgR in complex with resveratrol
分子名称: HTH-type transcriptional regulator TtgR, MAGNESIUM ION, RESVERATROL
著者Bingman, C.A, Nishikawa, K.K, Smith, R.W, Raman, S.
登録日2020-09-07
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Epistasis shapes the fitness landscape of an allosteric specificity switch.
Nat Commun, 12, 2021
7OBM
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BU of 7obm by Molmil
Crystal structure of the human Prolyl Endopeptidase-Like protein short form (residues 90-727)
分子名称: Prolyl endopeptidase-like
著者Rosier, K, McDevitt, M.T, Brendan, J.F, Marcaida, M.J, Bingman, C.A, Pagliarini, D.J, Creemers, J.W.M, Smith, R.W, Mitochondrial Protein Partnership (MPP)
登録日2021-04-22
公開日2021-11-10
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Prolyl endopeptidase-like is a (thio)esterase involved in mitochondrial respiratory chain function.
Iscience, 24, 2021
6AWL
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BU of 6awl by Molmil
Crystal structure of human Coq9
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE, Ubiquinone biosynthesis protein COQ9, ...
著者Bingman, C.A, Lohman, D.C, Smith, R.W, Pagliarini, D.J, Mitochondrial Protein Partnership (MPP)
登録日2017-09-05
公開日2019-02-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis.
Mol. Cell, 73, 2019
6DEW
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BU of 6dew by Molmil
Structure of human COQ9 protein with bound isoprene.
分子名称: (2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol, (2Z,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol, (2Z,6Z)-3,7,11-trimethyldodeca-2,6,10-trien-1-ol, ...
著者Bingman, C.A, Lohman, D.C, Smith, R.W, Pagliarini, D.J.
登録日2018-05-13
公開日2019-02-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An Isoprene Lipid-Binding Protein Promotes Eukaryotic Coenzyme Q Biosynthesis.
Mol.Cell, 73, 2019
7LVZ
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BU of 7lvz by Molmil
Crystal structure of ADO
分子名称: 2-aminoethanethiol dioxygenase, CHLORIDE ION, FE (II) ION, ...
著者Bingman, C.A, Fernandez, R.L, Smith, R.W, Fox, B.G, Brunold, T.C.
登録日2021-02-26
公開日2022-01-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献The Crystal Structure of Cysteamine Dioxygenase Reveals the Origin of the Large Substrate Scope of This Vital Mammalian Enzyme.
Biochemistry, 60, 2021
7UDQ
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BU of 7udq by Molmil
Crystal structure of COQ8A-CA157 inhibitor complex in space group P1
分子名称: 4-[(3,4,5-trimethoxyphenyl)amino]quinoline-7-carbonitrile, Atypical kinase COQ8A, mitochondrial, ...
著者Bingman, C.A, Murray, N, Smith, R.W, Pagliarini, D.J.
登録日2022-03-20
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Small-molecule inhibition of the archetypal UbiB protein COQ8.
Nat.Chem.Biol., 19, 2023
7UDP
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BU of 7udp by Molmil
Crystal structure of COQ8A-CA157 inhibitor complex in space group C2
分子名称: 4-[(3,4,5-trimethoxyphenyl)amino]quinoline-7-carbonitrile, Atypical kinase COQ8A, mitochondrial
著者Bingman, C.A, Murray, N, Smith, R.W, Pagliarini, D.J.
登録日2022-03-20
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Small-molecule inhibition of the archetypal UbiB protein COQ8.
Nat.Chem.Biol., 19, 2023
6UI3
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BU of 6ui3 by Molmil
GH5-4 broad specificity endoglucanase from Clostridum cellulovorans
分子名称: 1,2-ETHANEDIOL, Cellulase
著者Bianchetti, C.M, Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2019-09-30
公開日2020-10-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
8DK0
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BU of 8dk0 by Molmil
Crystal structure of RPA3624, a beta-propeller lactonase from Rhodopseudomonas palustris, with active-site bound (S)gamma-valerolactone
分子名称: CALCIUM ION, Gluconolactonase, SODIUM ION, ...
著者Bingman, C.A, Hall, B.W, Smith, R.W, Fox, B.G, Donohue, T.J.
登録日2022-07-01
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A broad specificity beta-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including gamma-valerolactone.
J.Biol.Chem., 299, 2022
8DJF
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BU of 8djf by Molmil
Crystal structure of RPA3624, a beta-propeller lactonase from Rhodopseudomonas palustris, with active-site bound tetrahedral intermediate
分子名称: (5S)-5-methyloxolane-2,2-diol, CALCIUM ION, Gluconolactonase, ...
著者Bingman, C.A, Hall, B.W, Smith, R.W, Fox, B.G, Donohue, T.J.
登録日2022-06-30
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A broad specificity beta-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including gamma-valerolactone.
J.Biol.Chem., 299, 2022
8DJZ
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BU of 8djz by Molmil
Crystal structure of RPA3624, a beta-propeller lactonase from Rhodopseudomonas palustris, with active-site bound product
分子名称: (4R)-4-hydroxypentanoic acid, CALCIUM ION, Gluconolactonase, ...
著者Bingman, C.A, Hall, B.W, Smith, R.W, Fox, B.G, Donohue, T.J.
登録日2022-07-01
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A broad specificity beta-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including gamma-valerolactone.
J.Biol.Chem., 299, 2022
8EW8
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BU of 8ew8 by Molmil
Crystal structure of Saccharomyces cerevisiae Altered Inheritance rate of Mitochondria protein 18 (AIM18p) R123A mutant
分子名称: Altered inheritance of mitochondria protein 18, mitochondrial, SULFATE ION
著者Bingman, C.A, Schmitz, J.M, Smith, R.W, Pagliarini, D.J.
登録日2022-10-21
公開日2023-03-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Aim18p and Aim46p are chalcone isomerase domain-containing mitochondrial hemoproteins in Saccharomyces cerevisiae.
J.Biol.Chem., 299, 2023
8EW9
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BU of 8ew9 by Molmil
Crystal structure of Saccharomyces cerevisiae Altered Inheritance rate of Mitochondria protein 46 (AIM46p)
分子名称: 2-OXOGLUTARIC ACID, Altered inheritance of mitochondria protein 46, mitochondrial
著者Bingman, C.A, Schmitz, J.M, Smith, R.W, Pagliarini, D.J, Mitochondrial Protein Partnership (MPP)
登録日2022-10-21
公開日2023-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Aim18p and Aim46p are chalcone isomerase domain-containing mitochondrial hemoproteins in Saccharomyces cerevisiae.
J.Biol.Chem., 299, 2023
3NDY
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BU of 3ndy by Molmil
The structure of the catalytic and carbohydrate binding domain of endoglucanase D from Clostridium cellulovorans
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endoglucanase D
著者Bianchetti, C.M, Smith, R.W, Bingman, C.A, Phillips Jr, G.N.
登録日2010-06-08
公開日2010-09-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of the catalytic and carbohydrate binding domain of endoglucanase D
To be Published
6MQ4
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BU of 6mq4 by Molmil
GH5-4 broad specificity endoglucanase from Hungateiclostridium cellulolyticum
分子名称: DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2018-10-09
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
7RIZ
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BU of 7riz by Molmil
Crystal structure of RPA3624, a beta-propeller lactonase from Rhodopseudomonas palustris, with active-site bound 2-hydroxyquinoline
分子名称: Beta-propeller lactonase, CALCIUM ION, QUINOLIN-2(1H)-ONE, ...
著者Bingman, C.A, Hall, B.W, Smith, R.W, Fox, B.G, Donohue, T.J.
登録日2021-07-20
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献A broad specificity beta-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including gamma-valerolactone.
J.Biol.Chem., 299, 2022
7RIS
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BU of 7ris by Molmil
Crystal structure of RPA3624, a beta-propeller lactonase from Rhodopseudomonas palustris, with active-site bound phosphate
分子名称: Beta-propeller lactonase, CALCIUM ION, PHOSPHATE ION, ...
著者Bingman, C.A, Hall, B.W, Smith, R.W, Fox, B.G, Donohue, T.J.
登録日2021-07-20
公開日2023-01-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献A broad specificity beta-propeller enzyme from Rhodopseudomonas palustris that hydrolyzes many lactones including gamma-valerolactone.
J.Biol.Chem., 299, 2022
3NDZ
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BU of 3ndz by Molmil
The structure of the catalytic and carbohydrate binding domain of endoglucanase D from Clostridium cellulovorans bound to cellotriose
分子名称: Endoglucanase D, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Bianchetti, C.M, Smith, R.W, Bingman, C.A, Phillips Jr, G.N.
登録日2010-06-08
公開日2011-06-29
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献The structure of the catalytic and carbohydrate binding domain of endoglucanase D bound to cellotriose
To be Published
6WQV
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BU of 6wqv by Molmil
GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose
分子名称: 1,2-ETHANEDIOL, Endoglucanase, NITRATE ION, ...
著者Bianchetti, C.M, Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-04-29
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
6WQY
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BU of 6wqy by Molmil
GH5-4 broad specificity endoglucanase from Bacteroides salanitronis
分子名称: CHLORIDE ION, Cellulase, MAGNESIUM ION
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-04-29
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020

 

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