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PDB: 165 results

7EQZ
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Crystal structure of Carboxypeptidase B complexed with Potato Carboxypeptidase Inhibitor
Descriptor: Carboxypeptidase B, GLYCINE, Metallocarboxypeptidase inhibitor, ...
Authors:Choong, Y.K, Gavor, E, Jobichen, C, Sivaraman, J.
Deposit date:2021-05-05
Release date:2021-11-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Aedes aegypti carboxypeptidase B1-inhibitor complex uncover the disparity between mosquito and non-mosquito insect carboxypeptidase inhibition mechanism.
Protein Sci., 30, 2021
3O4F
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Crystal Structure of Spermidine Synthase from E. coli
Descriptor: SULFATE ION, Spermidine synthase
Authors:Zhou, X, Tkaczuk, K.L, Chruszcz, M, Chua, T.K, Minor, W, Sivaraman, J.
Deposit date:2010-07-27
Release date:2010-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of Escherichia coli spermidine synthase SpeE reveals a unique substrate-binding pocket
J.Struct.Biol., 169, 2010
3OF8
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Structural Basis for Reversible and Irreversible Inhibition of Human Cathepsin L by their Respective Dipeptidyl Glyoxal and Diazomethylketone Inhibitors
Descriptor: Cathepsin L1, Nalpha-[(benzyloxy)carbonyl]-N-[(2S)-1-(4-tert-butoxyphenyl)-4-hydroxy-3-oxobutan-2-yl]-L-phenylalaninamide
Authors:Shenoy, R.T, Sivaraman, J.
Deposit date:2010-08-14
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for reversible and irreversible inhibition of human cathepsin L by their respective dipeptidyl glyoxal and diazomethylketone inhibitors.
J.Struct.Biol., 173, 2011
3OF9
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Structural Basis for Irreversible Inhibition of Human Cathepsin L by a Diazomethylketone Inhibitor
Descriptor: Cathepsin L1, Nalpha-[(benzyloxy)carbonyl]-N-[(1S)-1-(4-tert-butoxybenzyl)-3-diazo-2-oxopropyl]-L-phenylalaninamide
Authors:Shenoy, R.T, Sivaraman, J.
Deposit date:2010-08-14
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:Structural basis for reversible and irreversible inhibition of human cathepsin L by their respective dipeptidyl glyoxal and diazomethylketone inhibitors.
J.Struct.Biol., 173, 2011
7CBK
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Structure of Human Neutrophil Elastase Ecotin complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ecotin, ...
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2020-06-12
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for the Inhibition Mechanism of Ecotin against Neutrophil Elastase by Targeting the Active Site and Secondary Binding Site.
Biochemistry, 59, 2020
4PLJ
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Hepatitis E Virus E2s domain (Genotype IV) in complex with a neutralizing antibody 8G12
Descriptor: 8G12 heavy chain, 8G12 light chain, Capsid protein
Authors:Tang, X.H, Li, S.W, Sivaraman, J.
Deposit date:2014-05-18
Release date:2015-04-15
Last modified:2015-05-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the neutralization of hepatitis E virus by a cross-genotype antibody
Cell Res., 25, 2015
3RKD
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Hepatitis E Virus E2s domain (Genotype I) in complex with a neutralizing antibody
Descriptor: Capsid protein, Monoclonal Antibody, Heavy Chain, ...
Authors:Tang, X.H, Sivaraman, J.
Deposit date:2011-04-18
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the neutralization and genotype specificity of hepatitis E virus
Proc.Natl.Acad.Sci.USA, 108, 2011
4PLK
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Hepatitis E Virus E2s domain (Genotype I) in complex with a neutralizing antibody 8G12
Descriptor: 8G12 heavy chain, 8G12 light chain, Capsid protein
Authors:Tang, X.H, Li, S.W, Sivaraman, J.
Deposit date:2014-05-18
Release date:2015-04-08
Last modified:2015-05-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural basis for the neutralization of hepatitis E virus by a cross-genotype antibody
Cell Res., 25, 2015
3RKC
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Hepatitis E Virus Capsid Protein E2s Domain (genotype IV)
Descriptor: Capsid protein
Authors:Tang, X.H, Sivaraman, J.
Deposit date:2011-04-18
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural basis for the neutralization and genotype specificity of hepatitis E virus
Proc.Natl.Acad.Sci.USA, 108, 2011
4NQF
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Crystal structure of HEPN domain protein
Descriptor: Nucleotidyltransferase
Authors:Padavannil, A, Jobichen, C, Sivaraman, J.
Deposit date:2013-11-25
Release date:2014-03-26
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Dimerization of VirD2 Binding Protein Is Essential for Agrobacterium Induced Tumor Formation in Plants
Plos Pathog., 10, 2014
3RJ2
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Structural and functional characterization of a novel histone H3 binding protein ORF158L from the Singapore grouper iridovirus (SGIV)
Descriptor: Putative uncharacterized protein
Authors:Chen, L, Liu, Y, Sivaraman, J, Hew, C.L.
Deposit date:2011-04-15
Release date:2012-02-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Novel histone H3 binding protein ORF158L from the Singapore grouper iridovirus
J.Virol., 85, 2011
2MQ1
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Phosphotyrosine binding domain
Descriptor: E3 ubiquitin-protein ligase Hakai, ZINC ION
Authors:Mukherjee, M, Jing-Song, F, Sivaraman, J.
Deposit date:2014-06-11
Release date:2014-08-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dimeric switch of Hakai-truncated monomers during substrate recognition: insights from solution studies and NMR structure.
J.Biol.Chem., 289, 2014
2OVS
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Crystal structure of a Type Three secretion System protein
Descriptor: L0044, TETRAETHYLENE GLYCOL
Authors:Jobichen, C, Li, M, Sivaraman, J.
Deposit date:2007-02-15
Release date:2007-05-29
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of GrlR and the implication of its EDED motif in mediating the regulation of type III secretion system in EHEC.
Plos Pathog., 3, 2007
2Q1K
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Cyrstal Structure of AscE from Aeromonas hydrophilla
Descriptor: AscE
Authors:Tan, Y.W, Yu, H.B, Leung, K.Y, Sivaraman, J, Mok, Y.K.
Deposit date:2007-05-24
Release date:2008-06-03
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila.
Protein Sci., 17, 2008
2QHD
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Crystal structure of ecarpholin S (ser49-PLA2) complexed with fatty acid
Descriptor: LAURIC ACID, Phospholipase A2
Authors:Zhou, X, Tan, T.C, Valiyaveettil, S, Go, M.L, Kini, R.M, Sivaraman, J.
Deposit date:2007-07-02
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys.J., 95, 2008
2QHE
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Crystal structure of Ser49-PLA2 (ecarpholin S) from Echis carinatus sochureki snake venom
Descriptor: Phospholipase A2
Authors:Zhou, X, Valiyaveettil, S, Go, M.L, Kini, R.M, Sivaraman, J.
Deposit date:2007-07-02
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys.J., 95, 2008
1KAH
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BU of 1kah by Molmil
L-HISTIDINOL DEHYDROGENASE (HISD) STRUCTURE COMPLEXED WITH L-HISTIDINE (PRODUCT), ZN AND NAD (COFACTOR)
Descriptor: HISTIDINE, Histidinol dehydrogenase, ZINC ION
Authors:Barbosa, J.A.R.G, Sivaraman, J, Li, Y, Larocque, R, Matte, A, Schrag, J.D, Cygler, M.
Deposit date:2001-11-02
Release date:2002-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of action and NAD+-binding mode revealed by the crystal structure of L-histidinol dehydrogenase.
Proc.Natl.Acad.Sci.USA, 99, 2002
1KAR
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BU of 1kar by Molmil
L-HISTIDINOL DEHYDROGENASE (HISD) STRUCTURE COMPLEXED WITH HISTAMINE (INHIBITOR), ZINC AND NAD (COFACTOR)
Descriptor: HISTAMINE, Histidinol dehydrogenase, ZINC ION
Authors:Barbosa, J.A.R.G, Sivaraman, J, Li, Y, Larocque, R, Matte, A, Schrag, J.D, Cygler, M.
Deposit date:2001-11-02
Release date:2002-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of action and NAD+-binding mode revealed by the crystal structure of L-histidinol dehydrogenase.
Proc.Natl.Acad.Sci.USA, 99, 2002
1KAE
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BU of 1kae by Molmil
L-HISTIDINOL DEHYDROGENASE (HISD) STRUCTURE COMPLEXED WITH L-HISTIDINOL (SUBSTRATE), ZINC AND NAD (COFACTOR)
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, Histidinol dehydrogenase, ...
Authors:Barbosa, J.A.R.G, Sivaraman, J, Li, Y, Larocque, R, Matte, A, Schrag, J.D, Cygler, M.
Deposit date:2001-11-01
Release date:2002-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mechanism of action and NAD+-binding mode revealed by the crystal structure of L-histidinol dehydrogenase.
Proc.Natl.Acad.Sci.USA, 99, 2002
1LKZ
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Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli.
Descriptor: Ribose 5-phosphate isomerase A
Authors:Rangarajan, E.S, Sivaraman, J, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2002-04-26
Release date:2002-05-08
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of D-ribose-5-phosphate isomerase (RpiA) from Escherichia coli
Proteins, 48, 2002
3VP0
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Crystal structure of human glutaminase in complex with L-glutamine
Descriptor: GLUTAMINE, Glutaminase kidney isoform, mitochondrial, ...
Authors:Thangavelu, K, Sivaraman, J.
Deposit date:2012-02-23
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012
3VP2
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Crystal structure of human glutaminase in complex with inhibitor 2
Descriptor: 5,5'-(sulfanediyldiethane-2,1-diyl)bis(1,3,4-thiadiazol-2-amine), Glutaminase kidney isoform, mitochondrial, ...
Authors:Thangavelu, K, Sivaraman, J.
Deposit date:2012-02-23
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012
3VOZ
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Crystal structure of human glutaminase in complex with BPTES
Descriptor: Glutaminase kidney isoform, mitochondrial, N,N'-[sulfanediylbis(ethane-2,1-diyl-1,3,4-thiadiazole-5,2-diyl)]bis(2-phenylacetamide), ...
Authors:Thangavelu, K, Sivaraman, J.
Deposit date:2012-02-23
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012
3VOY
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Crystal structure of human glutaminase in apo form
Descriptor: Glutaminase kidney isoform, mitochondrial, SULFATE ION
Authors:Thangavelu, K, Sivaraman, J.
Deposit date:2012-02-23
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012
3VP4
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Crystal structure of human glutaminase in complex with inhibitor 4
Descriptor: 5,5'-butane-1,4-diylbis(1,3,4-thiadiazol-2-amine), Glutaminase kidney isoform, mitochondrial
Authors:Thangavelu, K, Sivaraman, J.
Deposit date:2012-02-23
Release date:2012-06-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis for the allosteric inhibitory mechanism of human kidney-type glutaminase (KGA) and its regulation by Raf-Mek-Erk signaling in cancer cell metabolism.
Proc.Natl.Acad.Sci.USA, 109, 2012

221051

數據於2024-06-12公開中

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