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PDB: 165 results

3EBW
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Crystal structure of major allergens, Per a 4 from cockroaches
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Per a 4 allergen
Authors:Tan, Y.W, Chan, S.L, Chew, F.T, Sivaraman, J, Mok, Y.K.
Deposit date:2008-08-28
Release date:2008-12-02
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of two major allergens, Bla g 4 and Per a 4, from cockroaches and their IgE binding epitopes.
J.Biol.Chem., 284, 2008
3E3C
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Structure of GrlR-lipid complex
Descriptor: (2R)-2-HYDROXY-3-(PHOSPHONOOXY)PROPYL HEXANOATE, L0044
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2008-08-07
Release date:2009-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Identification and characterization of the lipid binding property of GrlR, a locus of enterocyte effacement regulator.
Biochem.J., 2009
3H8B
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A combined crystallographic and molecular dynamics study of cathepsin-L retro-binding inhibitors(compound 9)
Descriptor: Cathepsin L1, N~2~,N~6~-bis(biphenyl-4-ylacetyl)-L-lysyl-D-arginyl-N-(2-phenylethyl)-L-phenylalaninamide
Authors:Tulsidas, S.R, Chowdhury, S.F, Kumar, S, Joseph, L, Purisima, E.O, Sivaraman, J.
Deposit date:2009-04-29
Release date:2009-10-20
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A combined crystallographic and molecular dynamics study of cathepsin L retrobinding inhibitors
J.Med.Chem., 52, 2009
3H89
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A combined crystallographic and molecular dynamics study of cathepsin-L retro-binding inhibitors(compound 4)
Descriptor: Cathepsin L1, N~2~,N~6~-bis(biphenyl-4-ylacetyl)-L-lysyl-D-arginyl-N-(2-phenylethyl)-L-tyrosinamide
Authors:Tulsidas, S.R, Chowdhury, S.F, Kumar, S, Joseph, L, Purisima, E.O, Sivaraman, J.
Deposit date:2009-04-29
Release date:2009-10-20
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A combined crystallographic and molecular dynamics study of cathepsin L retrobinding inhibitors
J.Med.Chem., 52, 2009
3H8C
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A combined crystallographic and molecular dynamics study of cathepsin-L retro-binding inhibitors (compound 14)
Descriptor: Cathepsin L1, N-(biphenyl-4-ylacetyl)-S-methyl-L-cysteinyl-D-arginyl-N-(2-phenylethyl)-L-phenylalaninamide
Authors:Tulsidas, S.R, Chowdhury, S.F, Kumar, S, Joseph, L, Purisima, E.O, Sivaraman, J.
Deposit date:2009-04-29
Release date:2009-10-20
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Combined Crystallographic and Molecular Dynamics Study of Cathepsin L Retrobinding Inhibitors
J.Med.Chem., 2009
3HH7
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Structural and Functional Characterization of a Novel Homodimeric Three-finger Neurotoxin from the Venom of Ophiophagus hannah (King Cobra)
Descriptor: Muscarinic toxin-like protein 3 homolog
Authors:Roy, A, Zhou, X, Chong, M.Z, D'hoedt, D, Foo, C.S, Rajagopalan, N, Nirthanan, S, Bertrand, D, Sivaraman, J, Kini, R.M.
Deposit date:2009-05-15
Release date:2010-01-12
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and Functional Characterization of a Novel Homodimeric Three-finger Neurotoxin from the Venom of Ophiophagus hannah (King Cobra)
J.Biol.Chem., 285, 2010
1K75
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BU of 1k75 by Molmil
The L-histidinol dehydrogenase (hisD) structure implicates domain swapping and gene duplication.
Descriptor: GLYCEROL, L-histidinol dehydrogenase, SULFATE ION
Authors:Barbosa, J.A.R.G, Sivaraman, J, Li, Y, Larocque, R, Matte, A, Schrag, J, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2001-10-18
Release date:2002-02-27
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mechanism of action and NAD+-binding mode revealed by the crystal structure of L-histidinol dehydrogenase.
Proc.Natl.Acad.Sci.USA, 99, 2002
3T7S
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Crystal structure of complex of SAM and BVU_3255, a methyltransferase from Bacteroides vulgatus ATCC 8482
Descriptor: Putative methyltransferase, S-ADENOSYLMETHIONINE
Authors:Kumar, V, Sivaraman, J.
Deposit date:2011-07-31
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of BVU_3255, a methyltransferase from human intestine antibiotic resistant pathogen Bacteroides vulgatus
J.Struct.Biol., 2011
3SXJ
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Crystal structure of complex of BT_2972 and AdoMet, a methyltransferase from Bacteroides thetaiotaomicron
Descriptor: Putative methyltransferase, S-ADENOSYLMETHIONINE
Authors:Kumar, V, Sivaraman, J.
Deposit date:2011-07-14
Release date:2011-09-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of complex of BT_2972 and AdoMet, a methyltransferase from Bacteroides thetaiotaomicron
To be Published
3T0I
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Crystal structure of complex of BT_2972 and AdoHcy, a methyltransferase from Bacteroides thetaiotaomicron
Descriptor: Putative methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Kumar, V, Sivaraman, J.
Deposit date:2011-07-20
Release date:2011-09-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of complex of BT_2972 and AdoHcy,a methyltransferase from Bacteroides thetaiotaomicron
To be published
2MQ1
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Phosphotyrosine binding domain
Descriptor: E3 ubiquitin-protein ligase Hakai, ZINC ION
Authors:Mukherjee, M, Jing-Song, F, Sivaraman, J.
Deposit date:2014-06-11
Release date:2014-08-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dimeric switch of Hakai-truncated monomers during substrate recognition: insights from solution studies and NMR structure.
J.Biol.Chem., 289, 2014
3T7T
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BU of 3t7t by Molmil
Crystal structure of complex of SAH and BVU_3255, a methyltransferase from Bacteroides vulgatus ATCC 8482
Descriptor: Putative methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Kumar, V, Sivaraman, J.
Deposit date:2011-07-31
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural characterization of BVU_3255, a methyltransferase from human intestine antibiotic resistant pathogen Bacteroides vulgatus
J.Struct.Biol., 2011
3T7R
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BU of 3t7r by Molmil
Crystal structure of apo BVU_3255, a methyltransferase from Bacteroides vulgatus ATCC 8482
Descriptor: 3-[(2Z)-3-methylpent-2-en-1-yl]benzene-1,2-diol, Putative methyltransferase
Authors:Kumar, V, Sivaraman, J.
Deposit date:2011-07-31
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural characterization of BVU_3255, a methyltransferase from human intestine antibiotic resistant pathogen Bacteroides vulgatus
J.Struct.Biol., 2011
3SVZ
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Crystal structure of apo BT_2972, a methyltransferase from Bacteroides thetaiotaomicron
Descriptor: Putative methyltransferase
Authors:Kumar, V, Sivaraman, J.
Deposit date:2011-07-13
Release date:2011-09-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of apo BT_2972, a methyltransferase from Bacteroides thetaiotaomicron
To be published
2Q1K
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Cyrstal Structure of AscE from Aeromonas hydrophilla
Descriptor: AscE
Authors:Tan, Y.W, Yu, H.B, Leung, K.Y, Sivaraman, J, Mok, Y.K.
Deposit date:2007-05-24
Release date:2008-06-03
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of AscE and induced burial regions in AscE and AscG upon formation of the chaperone needle-subunit complex of type III secretion system in Aeromonas hydrophila.
Protein Sci., 17, 2008
2QHD
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BU of 2qhd by Molmil
Crystal structure of ecarpholin S (ser49-PLA2) complexed with fatty acid
Descriptor: LAURIC ACID, Phospholipase A2
Authors:Zhou, X, Tan, T.C, Valiyaveettil, S, Go, M.L, Kini, R.M, Sivaraman, J.
Deposit date:2007-07-02
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys.J., 95, 2008
2QHE
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Crystal structure of Ser49-PLA2 (ecarpholin S) from Echis carinatus sochureki snake venom
Descriptor: Phospholipase A2
Authors:Zhou, X, Valiyaveettil, S, Go, M.L, Kini, R.M, Sivaraman, J.
Deposit date:2007-07-02
Release date:2007-10-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys.J., 95, 2008
2OVS
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BU of 2ovs by Molmil
Crystal structure of a Type Three secretion System protein
Descriptor: L0044, TETRAETHYLENE GLYCOL
Authors:Jobichen, C, Li, M, Sivaraman, J.
Deposit date:2007-02-15
Release date:2007-05-29
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of GrlR and the implication of its EDED motif in mediating the regulation of type III secretion system in EHEC.
Plos Pathog., 3, 2007
2ZR5
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BU of 2zr5 by Molmil
Crystal structure of a mutant PIN1 peptidyl-prolyl cis-trans isomerase
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Jobichen, C, Yih-Cherng, L, Sivaraman, J.
Deposit date:2008-08-22
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural studies on PIN1 mutants
To be Published
2ZR4
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Crystal structure of a mutant PIN1 peptidyl-prolyl cis-trans isomerase
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Jobichen, C, Yih-Cherng, L, Sivaraman, J.
Deposit date:2008-08-22
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural studies on PIN1 mutants
To be Published
2ZQT
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Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Jobichen, C, Liou, Y.C, Sivaraman, J.
Deposit date:2008-08-19
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.462 Å)
Cite:Structural studies on PIN1 mutants
To be Published
2ZR6
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BU of 2zr6 by Molmil
Crystal structure of a mutant PIN1 peptidyl-prolyl cis-trans isomerase
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Jobichen, C, Yih-Cherng, L, Sivaraman, J.
Deposit date:2008-08-22
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural studies on PIN1 mutants
To be Published
2ZQS
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BU of 2zqs by Molmil
Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Jobichen, C, Liou, Y.C, Sivaraman, J.
Deposit date:2008-08-19
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structural studies on PIN1 mutants
To be Published
3BJW
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Crystal Structure of ecarpholin S complexed with suramin
Descriptor: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, Phospholipase A2
Authors:Zhou, X, Sivaraman, J.
Deposit date:2007-12-04
Release date:2007-12-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys.J., 95, 2008
2ZQU
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BU of 2zqu by Molmil
Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Jobichen, C, Liou, Y.C, Sivaraman, J.
Deposit date:2008-08-19
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural studies on PIN1 mutants
To be Published

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數據於2024-07-17公開中

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