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PDB: 30 件

3EZ8
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BU of 3ez8 by Molmil
Crystal Structure of endoglucanase Cel9A from the thermoacidophilic Alicyclobacillus acidocaldarius
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Cellulase, ...
著者Pereira, J.H, Sapra, R, Simmons, B, Adams, P.D.
登録日2008-10-22
公開日2009-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Structure of endoglucanase Cel9A from the thermoacidophilic Alicyclobacillus acidocaldarius
Acta Crystallogr.,Sect.D, 65, 2009
2JUN
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BU of 2jun by Molmil
Structure of the MID1 tandem B-boxes reveals an interaction reminiscent of intermolecular RING heterodimers
分子名称: Midline-1, ZINC ION
著者Tao, H, Singireddy, S, Jakkidi, M, Simmons, B.N, Short, K.M, Cox, T.C, Massiah, M.A.
登録日2007-08-31
公開日2008-03-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the MID1 Tandem B-Boxes Reveals an Interaction Reminiscent of Intermolecular Ring Heterodimers
Biochemistry, 47, 2008
3U4A
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BU of 3u4a by Molmil
From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
分子名称: CALCIUM ION, JMB19063, beta-D-glucopyranose, ...
著者McAndrew, R.P, Park, J.I, Reindl, W, Friedland, G.D, D'haeseleer, P, Northen, T, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2011-10-07
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.196 Å)
主引用文献From soil to structure: a novel dimeric family 3-beta--glucosidase isolated from compost using metagenomic analysis
To be Published
3U48
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BU of 3u48 by Molmil
From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
分子名称: CALCIUM ION, JMB19063, beta-D-glucopyranose
著者McAndrew, R.P, Park, J.I, Reindl, W, Friedland, G.D, D'haeseleer, P, Northen, T, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2011-10-07
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献From soil to structure: a novel dimeric family 3-beta-glucosidase isolated from compost using metagenomic analysis
To be Published
5TL4
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BU of 5tl4 by Molmil
Crystal structure of Sphingomonas paucimobilis aryl O-demethylase LigM
分子名称: AMMONIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Kohler, A.C, Adams, P.D, Simmons, B.A, Sale, K.L.
登録日2016-10-10
公開日2017-04-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献Structure of aryl O-demethylase offers molecular insight into a catalytic tyrosine-dependent mechanism.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5J54
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BU of 5j54 by Molmil
The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
分子名称: Carotenoid oxygenase, FE (III) ION, OXYGEN MOLECULE, ...
著者McAndrew, R.P, Pereira, J.H, Sathitsuksanoh, N, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2016-04-01
公開日2016-11-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5J53
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BU of 5j53 by Molmil
The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
分子名称: Carotenoid oxygenase, FE (III) ION, OXYGEN MOLECULE, ...
著者McAndrew, R.P, Pereira, J.H, Sathitsuksanoh, N, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2016-04-01
公開日2016-11-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5J55
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BU of 5j55 by Molmil
The Structure and Mechanism of NOV1, a Resveratrol-Cleaving Dioxygenase
分子名称: 4-hydroxy-3-methoxybenzaldehyde, Carotenoid oxygenase, FE (III) ION, ...
著者McAndrew, R.P, Pereira, J.H, Sathitsuksanoh, N, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2016-04-01
公開日2016-11-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
2DQ5
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BU of 2dq5 by Molmil
solution structure of the Mid1 B Box2 Chc(D/C)C2H2 Zinc-Binding Domain: insights into an evolutionary conserved ring fold
分子名称: Midline-1, ZINC ION
著者Massiah, M.A, Matts, J.A.B, Short, K.M, Simmons, B.N, Singireddy, S, Zou, J, Cox, T.C.
登録日2006-05-20
公開日2007-04-03
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the MID1 B-box2 CHC(D/C)C(2)H(2) Zinc-binding Domain: Insights into an Evolutionarily Conserved RING Fold
J.Mol.Biol., 369, 2007
2FFW
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BU of 2ffw by Molmil
Solution structure of the RBCC/TRIM B-box1 domain of human MID1: B-box with a RING
分子名称: Midline-1, ZINC ION
著者Massiah, M.A, Simmons, B.N, Short, K.M, Cox, T.C.
登録日2005-12-20
公開日2006-05-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the RBCC/TRIM B-box1 Domain of Human MID1: B-box with a RING.
J.Mol.Biol., 358, 2006
5VL9
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BU of 5vl9 by Molmil
Crystal structure of EilR in complex with eilO DNA element
分子名称: DNA (5'-D(*GP*AP*AP*AP*GP*TP*TP*GP*GP*AP*CP*AP*TP*A)-3'), DNA (5'-D(*TP*AP*TP*GP*TP*CP*CP*AP*AP*CP*TP*TP*TP*C)-3'), HEXANE-1,6-DIOL, ...
著者Pereira, J.H, Ruegg, T.L, Chen, J, Novichkov, P, DeGiovani, A, Tomaleri, G.P, Singer, S, Simmons, B, Thelen, M, Adams, P.D.
登録日2017-04-25
公開日2018-06-27
最終更新日2022-03-16
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Jungle Express is a versatile repressor system for tight transcriptional control.
Nat Commun, 9, 2018
5VLG
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BU of 5vlg by Molmil
Crystal structure of EilR in complex with malachite green
分子名称: MALACHITE GREEN, Regulatory protein TetR
著者Pereira, J.H, Ruegg, T.L, Chen, J, Novichkov, P, DeGiovani, A, Tomaleri, G.P, Singer, S, Simmons, B, Thelen, M, Adams, P.D.
登録日2017-04-25
公開日2018-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.932 Å)
主引用文献Jungle Express is a versatile repressor system for tight transcriptional control.
Nat Commun, 9, 2018
5VLM
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BU of 5vlm by Molmil
Crystal structure of EilR in complex with crystal violet
分子名称: CRYSTAL VIOLET, Regulatory protein TetR
著者Pereira, J.H, Ruegg, T.L, Chen, J, Novichkov, P, DeGiovani, A, Tomaleri, G.P, Singer, S, Simmons, B, Thelen, M, Adams, P.D.
登録日2017-04-25
公開日2018-06-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.403 Å)
主引用文献Jungle Express is a versatile repressor system for tight transcriptional control.
Nat Commun, 9, 2018
1NME
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BU of 1nme by Molmil
Structure of Casp-3 with tethered salicylate
分子名称: 2-HYDROXY-5-(2-MERCAPTO-ETHYLSULFAMOYL)-BENZOIC ACID, 3-(2-MERCAPTO-ACETYLAMINO)-4-OXO-PENTANOIC ACID, Caspase-3
著者Erlanson, D.A, Lam, J, Wiesmann, C, Luong, T.N, Simmons, B, DeLano, W, Choong, I.C, Flanagan, M, Lee, D, O'Brian, T.
登録日2003-01-09
公開日2003-03-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献In situ assembly of enzyme inhibitors using extended tethering.
Nat.Biotechnol., 21, 2003
3PFX
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BU of 3pfx by Molmil
Crystal structure of Cel7A from Talaromyces emersonii in complex with cellobiose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cellobiohydrolase 1 catalytic domain, SULFATE ION, ...
著者Qin, L, Pereira, J.H, McAndrew, R.P, Simmons, B.A, Sapra, R, Adams, P.D, Sale, K.L.
登録日2010-10-29
公開日2011-11-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.2616 Å)
主引用文献Crystal structure of Cel7A from Talaromyces emersonii in complex with cellobiose
TO BE PUBLISHED
3PFZ
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BU of 3pfz by Molmil
Crystal structure of Cel7A from Talaromyces emersonii in complex with cellotetraose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cellobiohydrolase 1 catalytic domain, SULFATE ION, ...
著者Qin, L, Pereira, J.H, McAndrew, R.P, Simmons, B.A, Sapra, R, Adams, P.D, Sale, K.L.
登録日2010-10-29
公開日2011-11-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.0993 Å)
主引用文献Crystal structure of Cel7A from Talaromyces emersonii in complex with cellotetraose
TO BE PUBLISHED
4YAN
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BU of 4yan by Molmil
Crystal structure of LigE in complex with glutathione (GSH) from Sphingobium sp. strain SYK-6
分子名称: Beta-etherase, GLUTATHIONE
著者Pereira, J.H, McAndrew, R.P, Heins, R.A, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2015-02-17
公開日2015-12-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.593 Å)
主引用文献Structural Basis of Stereospecificity in the Bacterial Enzymatic Cleavage of beta-Aryl Ether Bonds in Lignin.
J.Biol.Chem., 291, 2016
4YAI
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BU of 4yai by Molmil
Crystal structure of LigL in complex with NADH and GGE from Sphingobium sp. strain SYK-6
分子名称: (1S,2R)-1-(4-hydroxy-3-methoxyphenyl)-2-(2-methoxyphenoxy)propane-1,3-diol, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, C alpha-dehydrogenase, ...
著者Pereira, J.H, McAndrew, R.P, Heins, R.A, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2015-02-17
公開日2016-03-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin beta-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6.
J.Biol.Chem., 291, 2016
3MMU
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BU of 3mmu by Molmil
Crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima
分子名称: CADMIUM ION, Endoglucanase, NICKEL (II) ION
著者Pereira, J.H, Chen, Z, McAndrew, R.P, Sapra, R, Chhabra, S.R, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2010-04-20
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima.
J.Struct.Biol., 172, 2010
4YAM
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BU of 4yam by Molmil
Crystal structure of LigE-apo form from Sphingobium sp. strain SYK-6
分子名称: Beta-etherase
著者Pereira, J.H, McAndrew, R.P, Heins, R.A, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2015-02-17
公開日2015-12-16
最終更新日2016-07-20
実験手法X-RAY DIFFRACTION (1.905 Å)
主引用文献Structural Basis of Stereospecificity in the Bacterial Enzymatic Cleavage of beta-Aryl Ether Bonds in Lignin.
J.Biol.Chem., 291, 2016
4YAE
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BU of 4yae by Molmil
Crystal structure of LigL-apo form from Sphingobium sp. strain SYK-6
分子名称: C alpha-dehydrogenase
著者Pereira, J.H, McAndrew, R.P, Heins, R.A, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2015-02-17
公開日2016-03-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.602 Å)
主引用文献Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin beta-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6.
J.Biol.Chem., 291, 2016
4YAV
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BU of 4yav by Molmil
Crystal structure of LigG in complex with B-glutathionyl-acetoveratrone (GS-AV) from Sphingobium sp. strain SYK-6
分子名称: Glutathione S-transferase, L-gamma-glutamyl-3-{(E)-[2-(3,4-dimethoxyphenyl)-2-oxoethylidene]-lambda~4~-sulfanyl}-L-alanylglycine, SULFATE ION
著者Pereira, J.H, McAndrew, R.P, Heins, R.A, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2015-02-17
公開日2016-03-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin beta-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6.
J.Biol.Chem., 291, 2016
4YAG
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BU of 4yag by Molmil
Crystal structure of LigL in complex with NADH from Sphingobium sp. strain SYK-6
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, C alpha-dehydrogenase
著者Pereira, J.H, McAndrew, R.P, Heins, R.A, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2015-02-17
公開日2016-03-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin beta-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6.
J.Biol.Chem., 291, 2016
4YAP
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BU of 4yap by Molmil
Crystal structure of LigG-apo form from Sphingobium sp. strain SYK-6
分子名称: Glutathione S-transferase homolog, SULFATE ION
著者Pereira, J.H, McAndrew, R.P, Heins, R.A, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2015-02-17
公開日2016-03-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.111 Å)
主引用文献Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin beta-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6.
J.Biol.Chem., 291, 2016
4YAC
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BU of 4yac by Molmil
Crystal structure of LigO in complex with NADH from Sphingobium sp. strain SYK-6
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, C alpha-dehydrogenase
著者Pereira, J.H, McAndrew, R.P, Heins, R.A, Sale, K.L, Simmons, B.A, Adams, P.D.
登録日2015-02-17
公開日2016-03-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin beta-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6.
J.Biol.Chem., 291, 2016

 

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