PDB Search results for query - 일본 단백질구조 데이터 뱅크

PDB: 29 results

Crystal structure of Haemophilus Eagan 4A polysaccharide bound human lung surfactant protein D
Descriptor:	4,7-anhydro-3-deoxy-D-manno-oct-2-ulosonic acid-(5-1)-L-glycero-alpha-D-manno-heptopyranose, CALCIUM ION, Pulmonary surfactant-associated protein D
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2012-03-13
Release date:	2013-03-27
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Crystal Structure of a Complex of Surfactant Protein D (SP-D) and Haemophilus influenzae Lipopolysaccharide Reveals Shielding of Core Structures in SP-D-Resistant Strains. Infect.Immun., 84, 2016

1QTJ

CRYSTAL STRUCTURE OF LIMULUS POLYPHEMUS SAP
Descriptor:	PROTEIN (SERUM AMYLOID P COMPONENT)
Authors:	Shrive, A.K, Metcalfe, A.M, Cartwright, J.R, Greenhough, T.J.
Deposit date:	1999-06-28
Release date:	2000-06-28
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	C-reactive protein and SAP-like pentraxin are both present in Limulus polyphemus haemolymph: crystal structure of Limulus SAP. J.Mol.Biol., 290, 1999

5OXS

Crystal structure of human lung surfactant protein D trimeric fragment with bound ligand Salmonella enterica Minnesota R5 oligosaccharide
Descriptor:	CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-glucopyranose-(1-3)-L-glycero-alpha-D-manno-heptopyranose-(1-3)-L-glycero-alpha-D-manno-heptopyranose-(1-5)-4,7-anhydro-3-deoxy-D-gluco-oct-2-ulosonic acid
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2017-09-07
Release date:	2018-06-20
Last modified:	2024-10-16
Method:	X-RAY DIFFRACTION (1.65 Å)
Cite:	Structural definition of hSP-D recognition of Salmonella enterica LPS inner core oligosaccharides reveals alternative binding modes for the same LPS. PLoS ONE, 13, 2018

5OXR

Crystal structure of human lung surfactant protein D trimeric fragment with bound ligand Salmonella enterica Minnesota R7 oligosaccharide
Descriptor:	CALCIUM ION, L-glycero-alpha-D-manno-heptopyranose-(1-3)-L-glycero-alpha-D-manno-heptopyranose-(1-5)-4,7-anhydro-3-deoxy-D-gluco-oct-2-ulosonic acid, Pulmonary surfactant-associated protein D
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2017-09-07
Release date:	2018-06-20
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1.75 Å)
Cite:	Structural definition of hSP-D recognition of Salmonella enterica LPS inner core oligosaccharides reveals alternative binding modes for the same LPS. PLoS ONE, 13, 2018

6ZR0

Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1 with N-acetylalanine ligand bound
Descriptor:	ACETIC ACID, CALCIUM ION, Fibrinogen C domain-containing protein 1, ...
Authors:	Shrive, A.K, Greenhough, T.J, Williams, H.M.
Deposit date:	2020-07-10
Release date:	2021-07-21
Last modified:	2024-01-31
Method:	X-RAY DIFFRACTION (1.94 Å)
Cite:	Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs J.Biol.Chem., 2023

6ZQR

Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1 with GlcNAc ligand bound
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, CALCIUM ION, ...
Authors:	Shrive, A.K, Greenhough, T.J, Williams, H.M.
Deposit date:	2020-07-10
Release date:	2021-07-21
Last modified:	2024-01-31
Method:	X-RAY DIFFRACTION (1.93 Å)
Cite:	Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs J.Biol.Chem., 2023

6ZQY

Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1 with Neu5Ac ligand bound
Descriptor:	ACETIC ACID, CALCIUM ION, Fibrinogen C domain-containing protein 1, ...
Authors:	Shrive, A.K, Greenhough, T.J, Williams, H.M.
Deposit date:	2020-07-10
Release date:	2021-07-21
Last modified:	2024-10-09
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs J.Biol.Chem., 2023

6ZR4

Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1
Descriptor:	ACETIC ACID, CALCIUM ION, Fibrinogen C domain-containing protein 1, ...
Authors:	Shrive, A.K, Greenhough, T.J, Williams, H.M.
Deposit date:	2020-07-10
Release date:	2021-07-21
Last modified:	2024-01-31
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs J.Biol.Chem., 2023

6ZR3

Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1 with N-acetyl-galactosamine-4-sulfate ligand bound
Descriptor:	2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, ACETIC ACID, CALCIUM ION, ...
Authors:	Shrive, A.K, Greenhough, T.J, Williams, H.M.
Deposit date:	2020-07-10
Release date:	2021-07-21
Last modified:	2024-01-31
Method:	X-RAY DIFFRACTION (1.97 Å)
Cite:	Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs J.Biol.Chem., 2023

6ZQX

Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1 with N,N'-diacetyl chitobiose ligand bound
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, CALCIUM ION, ...
Authors:	Shrive, A.K, Greenhough, T.J, Williams, H.M.
Deposit date:	2020-07-10
Release date:	2021-07-21
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1.84 Å)
Cite:	Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs J.Biol.Chem., 2023

1GNH

HUMAN C-REACTIVE PROTEIN
Descriptor:	C-REACTIVE PROTEIN, CALCIUM ION
Authors:	Shrive, A.K, Cheetham, G.M.T, Holden, D, Myles, D.A, Turnell, W.G, Volanakis, J.E, Pepys, M.B, Bloomer, A.C, Greenhough, T.J.
Deposit date:	1996-03-01
Release date:	1997-01-27
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Three dimensional structure of human C-reactive protein. Nat.Struct.Biol., 3, 1996

1PWB

High resolution crystal structure of an active recombinant fragment of human lung surfactant protein D with maltose
Descriptor:	CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-glucopyranose, ...
Authors:	Shrive, A.K, Tharia, H.A, Strong, P, Kishore, U, Burns, I, Rizkallah, P.J, Reid, K.B, Greenhough, T.J.
Deposit date:	2003-07-01
Release date:	2003-08-05
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (1.4 Å)
Cite:	High-resolution structural insights into ligand binding and immune cell recognition by human lung surfactant protein D J.Mol.Biol., 331, 2003

1PW9

High resolution crystal structure of an active recombinant fragment of human lung surfactant protein D
Descriptor:	CALCIUM ION, Pulmonary surfactant-associated protein D
Authors:	Shrive, A.K, Tharia, H.A, Strong, P, Kishore, U, Burns, I, Rizkallah, P.J, Reid, K.B, Greenhough, T.J.
Deposit date:	2003-07-01
Release date:	2003-08-05
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	High resolution structural insights into ligand binding and immune cell recognition by human lung surfactant protein D J.Mol.Biol., 331, 2003

1QFE

THE STRUCTURE OF TYPE I 3-DEHYDROQUINATE DEHYDRATASE FROM SALMONELLA TYPHI
Descriptor:	3-AMINO-4,5-DIHYDROXY-CYCLOHEX-1-ENECARBOXYLATE, PROTEIN (3-DEHYDROQUINATE DEHYDRATASE)
Authors:	Shrive, A.K, Polikarpov, I, Sawyer, L, Coggins, J.R, Hawkins, A.R.
Deposit date:	1999-04-05
Release date:	2000-04-05
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction. Nat.Struct.Biol., 6, 1999

6RYG

native structure of conglutinin carbohydrate recognition domain
Descriptor:	CALCIUM ION, Conglutinin
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2019-06-10
Release date:	2019-10-09
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (0.974 Å)
Cite:	Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. J.Biol.Chem., 294, 2019

6RYM

Structure of carbohydrate recognition domain with GlcNAc bound
Descriptor:	2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2019-06-10
Release date:	2019-10-09
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (1.46 Å)
Cite:	Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. J.Biol.Chem., 294, 2019

6RYJ

structure of conglutinin carbohydrate recognition domain with ethylene glycol bound
Descriptor:	1,2-ETHANEDIOL, CALCIUM ION, Conglutinin
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2019-06-10
Release date:	2019-10-09
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (1.25 Å)
Cite:	Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. J.Biol.Chem., 294, 2019

6RYN

Structure of conglutinin carbohydrate recognition domain with GlcNAc-alpha-1-phosphate bound
Descriptor:	2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, CALCIUM ION, Conglutinin
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2019-06-10
Release date:	2019-10-09
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (1 Å)
Cite:	Atomic-resolution crystal structures of the immune protein conglutinin from cow reveal specific interactions of its binding site withN-acetylglucosamine. J.Biol.Chem., 294, 2019

3FLR

Crystal structure of native octameric SAP-like pentraxin from Limulus polyphemus
Descriptor:	CALCIUM ION, SAP-like pentraxin
Authors:	Shrive, A.K, Greenhough, T.J, Armstrong, P.B.
Deposit date:	2008-12-19
Release date:	2009-01-20
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations. J.Mol.Biol., 386, 2009

3FLP

Crystal structure of native heptameric SAP-like pentraxin from Limulus polyphemus
Descriptor:	CALCIUM ION, SAP-like pentraxin
Authors:	Shrive, A.K, Greenhough, T.J, Armstrong, P.B.
Deposit date:	2008-12-19
Release date:	2009-01-20
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations. J.Mol.Biol., 386, 2009

3FLT

Crystal structure of PE-bound octameric SAP-like pentraxin from Limulus polyphemus
Descriptor:	CALCIUM ION, PHOSPHORIC ACID MONO-(2-AMINO-ETHYL) ESTER, SAP-like pentraxin
Authors:	Shrive, A.K, Greenhough, T.J, Armstrong, P.B.
Deposit date:	2008-12-19
Release date:	2009-01-20
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations. J.Mol.Biol., 386, 2009

3IKP

Crystal structure of inositol phosphate bound trimeric human lung surfactant protein D
Descriptor:	CALCIUM ION, D-MYO-INOSITOL-1-PHOSPHATE, Pulmonary surfactant-associated protein D
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2009-08-06
Release date:	2009-11-17
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (1.75 Å)
Cite:	Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325 J.Mol.Biol., 394, 2009

3IKN

Crystal structure of galactose bound trimeric human lung surfactant protein D
Descriptor:	CALCIUM ION, Pulmonary surfactant-associated protein D, beta-D-galactopyranose
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2009-08-06
Release date:	2009-11-17
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325 J.Mol.Biol., 394, 2009

3IKR

Crystal structure of alpha 1-4 mannobiose bound trimeric human lung surfactant protein D
Descriptor:	CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2009-08-06
Release date:	2009-11-17
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.65 Å)
Cite:	Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325 J.Mol.Biol., 394, 2009

3IKQ

Crystal structure of alpha 1-2 mannobiose bound trimeric human lung surfactant protein D
Descriptor:	CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose
Authors:	Shrive, A.K, Greenhough, T.J.
Deposit date:	2009-08-06
Release date:	2009-11-17
Last modified:	2024-10-09
Method:	X-RAY DIFFRACTION (2.25 Å)
Cite:	Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325 J.Mol.Biol., 394, 2009

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Total results:	29
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Shrive, A.K"