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PDB: 63 results

1N8B
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BU of 1n8b by Molmil
Bacteriophage T4 baseplate structural protein gp8
Descriptor: BROMIDE ION, baseplate structural protein gp8
Authors:Leiman, P.G, Shneider, M.M, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2002-11-20
Release date:2003-06-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure and location of gene product 8 in the bacteriophage T4 baseplate
J.Mol.Biol., 328, 2003
2FL9
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BU of 2fl9 by Molmil
Evolution of bacteriophage tails: Structure of T4 gene product 10
Descriptor: Baseplate structural protein Gp10
Authors:Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2006-01-05
Release date:2006-04-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (17 Å)
Cite:Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
2FL8
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Fitting of the gp10 trimer structure into the cryoEM map of the bacteriophage T4 baseplate in the hexagonal conformation.
Descriptor: Baseplate structural protein Gp10
Authors:Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2006-01-05
Release date:2006-04-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
3PQI
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BU of 3pqi by Molmil
Crystal structure of the bacteriophage phi92 membrane-piercing protein gp138
Descriptor: FE (III) ION, POTASSIUM ION, gene product 138
Authors:Browning, C, Shneider, M, Leiman, P.G.
Deposit date:2010-11-26
Release date:2012-02-22
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.642 Å)
Cite:Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
2FKK
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BU of 2fkk by Molmil
Crystal structure of the C-terminal domain of the bacteriophage T4 gene product 10
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BROMIDE ION, ...
Authors:Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2006-01-04
Release date:2006-04-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Evolution of bacteriophage tails: structure of t4 gene product 10
J.Mol.Biol., 358, 2006
5W5P
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BU of 5w5p by Molmil
Crystal structure of Acinetobacter baumannii phage AM24 tailspike protein
Descriptor: Tail fiber protein, ZINC ION
Authors:Plattner, M, Shneider, M.M, Leiman, P.G.
Deposit date:2017-06-15
Release date:2018-12-19
Method:X-RAY DIFFRACTION (2.429 Å)
Cite:Crystal structure of Acinetobacter baumannii phage AM24 tailspike protein
To be Published
6PYT
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BU of 6pyt by Molmil
CryoEM Structure of Pyocin R2 - precontracted - trunk
Descriptor: Pyocin sheath PA0622, Pyocin tube PA0623
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-07-30
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
4MTK
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BU of 4mtk by Molmil
Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System
Descriptor: SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE, VgrG1
Authors:Sycheva, L.V, Shneider, M.M, Leiman, P.G.
Deposit date:2013-09-19
Release date:2014-10-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.322 Å)
Cite:The conserved architecture of the T6SS central spike complex
To be Published
6U5B
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BU of 6u5b by Molmil
CryoEM Structure of Pyocin R2 - precontracted - baseplate
Descriptor: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5K
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BU of 6u5k by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - baseplate
Descriptor: Glue PA0627, Sheath Initiator PA0617, Sheath PA0622, ...
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5F
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BU of 6u5f by Molmil
CryoEM Structure of Pyocin R2 - precontracted - collar
Descriptor: Collar PA0615, Sheath PA0622, Tube PA0623
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5J
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BU of 6u5j by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - collar
Descriptor: Collar PA0615, Sheath PA0622
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6ORJ
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BU of 6orj by Molmil
Central spike of phiKZ phage tail
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHIKZ164, ...
Authors:Leiman, P.G, Browning, C, Shneider, M.M.
Deposit date:2019-04-30
Release date:2019-06-19
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Central spike of phiKZ phage tail
To Be Published
6U5H
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BU of 6u5h by Molmil
CryoEM Structure of Pyocin R2 - precontracted - hub
Descriptor: Probable bacteriophage protein Pyocin R2
Authors:Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
Deposit date:2019-08-27
Release date:2020-04-15
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
4OSD
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BU of 4osd by Molmil
Dimer of a C-terminal fragment of phage T4 gp5 beta-helix
Descriptor: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2014-02-12
Release date:2015-02-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4.
Viruses, 7, 2015
4JIW
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BU of 4jiw by Molmil
c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
Descriptor: CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-03-07
Release date:2013-08-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.402 Å)
Cite:PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4MTM
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BU of 4mtm by Molmil
Crystal structure of the tail fiber gp53 from Acinetobacter baumannii bacteriophage AP22
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, GLYCEROL, ...
Authors:Sycheva, L.V, Shneider, M.M, Leiman, P.G.
Deposit date:2013-09-19
Release date:2014-10-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.368 Å)
Cite:Crystal Structure of the putative tail fiber protein gp53 from the Acinetobacter baumannii bacteriophage AP22
Biorxiv, 2019
4GBF
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BU of 4gbf by Molmil
Crystal structure of the C-terminal domain of gp131 from bacteriophage phiKZ
Descriptor: CHLORIDE ION, MAGNESIUM ION, PHIKZ131
Authors:Sycheva, L.V, Shneider, M.M, Leiman, P.G.
Deposit date:2012-07-27
Release date:2012-10-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Crystal structure and location of gp131 in the bacteriophage phiKZ virion.
Virology, 434, 2012
4JIV
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BU of 4jiv by Molmil
VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
Descriptor: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-03-07
Release date:2013-08-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
6RJU
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BU of 6rju by Molmil
C-terminal domain of TssA protein from T6SS of Escherichia coli.
Descriptor: Putative type VI secretion protein
Authors:Nazarov, S, Shneider, M, Basler, M, Leiman, P.
Deposit date:2019-04-29
Release date:2020-06-03
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of TssA protein from Type VI secretion system of E. coli.
To Be Published
4KU0
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BU of 4ku0 by Molmil
Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment
Descriptor: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, FE (III) ION, ...
Authors:Buth, S.A, Leiman, P.G, Shneider, M.M.
Deposit date:2013-05-21
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystall structute of the business end of the T4 cell-puncturing device
To be Published
6E0V
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BU of 6e0v by Molmil
Apo crystal structure of the colanidase tailspike protein gp150 of Phage Phi92
Descriptor: 1,2-ETHANEDIOL, Bacteriophage Phi92 gp150, CHLORIDE ION, ...
Authors:Leiman, P.G, Browning, C, Gerardy-Schahn, R, Shneider, M.M, Plattner, M, Schwarzer, D.
Deposit date:2018-07-07
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
To Be Published
6E1R
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BU of 6e1r by Molmil
Crystal structure of the Acinetobacter phage vB_ApiP_P1 tailspike protein
Descriptor: CHLORIDE ION, SODIUM ION, Tailspike protein
Authors:Plattner, M, Shneider, M.M, Oliveira, H, Azeredo, J, Leiman, P.G.
Deposit date:2018-07-10
Release date:2019-07-17
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Crystal structure of the Acinetobacter phage vB_ApiP_P1 tailspike protein
To Be Published
6E0W
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BU of 6e0w by Molmil
Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
Descriptor: 1,2-ETHANEDIOL, 1,5-anhydro-4,6-O-[(1R)-1-carboxyethylidene]-D-galactitol, Bacteriophage Phi92 gp150, ...
Authors:Plattner, M, Browning, C, Gerardy-Schahn, R, Shneider, M.M, Leiman, P.G, Schwarzer, D.
Deposit date:2018-07-07
Release date:2019-07-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid
To Be Published
6ET6
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BU of 6et6 by Molmil
Crystal structure of muramidase from Acinetobacter baumannii AB 5075UW prophage
Descriptor: GLYCEROL, Lysozyme, SULFATE ION
Authors:Boyko, K.M, Nikolaeva, A.Y, Sykilinda, N.N, Shneider, M.M, Miroshnikov, K.A, Popov, V.O.
Deposit date:2017-10-25
Release date:2018-09-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of anAcinetobacterBroad-Range Prophage Endolysin Reveals a C-Terminal alpha-Helix with the Proposed Role in Activity against Live Bacterial Cells.
Viruses, 10, 2018

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