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PDB: 375 results

2DRQ
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Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263G mutant
Descriptor: GLYCEROL, NICKEL (II) ION, Xylanase Y
Authors:Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
Deposit date:2006-06-12
Release date:2006-06-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2RVA
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BU of 2rva by Molmil
Solution structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: Glucanase
Authors:Shinya, S, Nishimura, S, Fukamizo, T.
Deposit date:2015-05-13
Release date:2016-04-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase.
Biochem.J., 473, 2016
2RV9
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BU of 2rv9 by Molmil
Solution structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: Glucanase
Authors:Shinya, S, Nishimura, S, Fukamizo, T.
Deposit date:2015-05-12
Release date:2016-04-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase.
Biochem.J., 473, 2016
4ZXE
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BU of 4zxe by Molmil
X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5.
Descriptor: 1,2-ETHANEDIOL, Glucanase/Chitosanase, SULFATE ION
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-20
Release date:2016-04-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZY9
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X-ray crystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: Glucanase/chitosanase
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-21
Release date:2016-04-13
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZZ5
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BU of 4zz5 by Molmil
X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: 1,2-ETHANEDIOL, Glucanase/chitosanase, SULFATE ION
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-22
Release date:2016-04-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZZ8
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BU of 4zz8 by Molmil
X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: 1,2-ETHANEDIOL, 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, Glucanase/chitosanase, ...
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-22
Release date:2016-04-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
2LMK
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BU of 2lmk by Molmil
Solution Structure of Mouse Pheromone ESP1
Descriptor: Exocrine gland-secreting peptide 1
Authors:Yoshinaga, S, Sato, T, Hirakane, M, Esaki, K, Hamaguchi, T, Haga-Yamanaka, S, Tsunoda, M, Kimoto, H, Shimada, I, Touhara, K, Terasawa, H.
Deposit date:2011-12-06
Release date:2013-04-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure of the Mouse Sex Peptide Pheromone ESP1 Reveals a Molecular Basis for Specific Binding to the Class-C G-Protein-Coupled Vomeronasal Receptor
J.Biol.Chem., 2013
2DRR
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BU of 2drr by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263N mutant
Descriptor: GLYCEROL, NICKEL (II) ION, Xylanase Y
Authors:Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
Deposit date:2006-06-12
Release date:2006-06-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
1WU5
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BU of 1wu5 by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase complexed with xylose
Descriptor: GLYCEROL, NICKEL (II) ION, beta-D-xylopyranose, ...
Authors:Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
Deposit date:2004-12-01
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
1WU4
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BU of 1wu4 by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase
Descriptor: GLYCEROL, NICKEL (II) ION, xylanase Y
Authors:Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
Deposit date:2004-12-01
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
1WU6
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BU of 1wu6 by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase E70A mutant complexed with xylobiose
Descriptor: GLYCEROL, NICKEL (II) ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
Authors:Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
Deposit date:2004-12-01
Release date:2005-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
3AJV
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BU of 3ajv by Molmil
Splicing endonuclease from Aeropyrum pernix
Descriptor: CHLORIDE ION, GLYCEROL, Putative uncharacterized protein, ...
Authors:Yoshinari, S, Watanabe, Y, Okuda, M, Shiba, T, Inaoka, K.D, Kurisu, G.
Deposit date:2010-06-19
Release date:2010-11-17
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Conserved Lysine Residue in the Crenarchaea-Specific Loop is Important for the Crenarchaeal Splicing Endonuclease Activity.
J.Mol.Biol., 405, 2011
8HVB
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BU of 8hvb by Molmil
Crystal structure of lacto-N-biosidase StrLNBase from Streptomyces sp. strain 142, lacto-N-biose complex
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, Lacto-N-biosidase, beta-D-galactopyranose
Authors:Fushinobu, S, Yamada, C, Fujio, N.
Deposit date:2022-12-26
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of glycoside hydrolase family 20 lacto-N-biosidase from soil bacterium Streptomyces sp. strain 142
to be published
8HVC
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BU of 8hvc by Molmil
Crystal structure of lacto-N-biosidase StrLNBase from Streptomyces sp. strain 142, galacto-N-biose complex 1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Lacto-N-biosidase, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
Authors:Fushinobu, S, Yamada, C, Fujio, N.
Deposit date:2022-12-26
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of glycoside hydrolase family 20 lacto-N-biosidase from soil bacterium Streptomyces sp. strain 142
to be published
8HVD
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BU of 8hvd by Molmil
Crystal structure of lacto-N-biosidase StrLNBase from Streptomyces sp. strain 142, galacto-N-biose complex 2
Descriptor: Lacto-N-biosidase, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
Authors:Fushinobu, S, Yamada, C, Fujio, N.
Deposit date:2022-12-26
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structure of glycoside hydrolase family 20 lacto-N-biosidase from soil bacterium Streptomyces sp. strain 142
to be published
3QG0
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BU of 3qg0 by Molmil
Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Phosphate and 1-Deoxynojirimycin
Descriptor: 1-DEOXYNOJIRIMYCIN, Cellobiose Phosphorylase, PHOSPHATE ION, ...
Authors:Fushinobu, S, Hidaka, M, Hayashi, A.M, Wakagi, T, Shoun, H, Kitaoka, M.
Deposit date:2011-01-24
Release date:2011-09-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
3QFY
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BU of 3qfy by Molmil
Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Sulfate and Isofagomine
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, Cellobiose Phosphorylase, ...
Authors:Fushinobu, S, Hidaka, M, Hayashi, A.M, Wakagi, T, Shoun, H, Kitaoka, M.
Deposit date:2011-01-24
Release date:2011-09-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
3QFZ
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BU of 3qfz by Molmil
Crystal Structure of Cellvibrio gilvus Cellobiose Phosphorylase Complexed with Sulfate and 1-Deoxynojirimycin
Descriptor: 1-DEOXYNOJIRIMYCIN, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cellobiose Phosphorylase, ...
Authors:Fushinobu, S, Hidaka, M, Hayashi, A.M, Wakagi, T, Shoun, H, Kitaoka, M.
Deposit date:2011-01-24
Release date:2011-09-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Interactions between glycoside hydrolase family 94 cellobiose phosphorylase and glucosidase inhibitors
J.Appl.Glyosci., 58, 2011
3RI9
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Xylanase C from Aspergillus kawachii F131W mutant
Descriptor: Endo-1,4-beta-xylanase 3
Authors:Fushinobu, S, Uno, T, Kitaoka, M, Hayashi, K, Matsuzawa, H, Wakagi, T.
Deposit date:2011-04-13
Release date:2011-09-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutational analysis of fungal family 11 xylanases on pH optimum determination
J.APPL.GLYOSCI., 58, 2011
3R1M
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BU of 3r1m by Molmil
Structure of bifunctional fructose 1,6-bisphosphate aldolase/phosphatase (aldolase form)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,3-DIHYDROXYACETONEPHOSPHATE, MAGNESIUM ION, ...
Authors:Fushinobu, S, Nishimasu, H, Hattori, D, Song, H.-J, Wakagi, T.
Deposit date:2011-03-10
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis for the bifunctionality of fructose-1,6-bisphosphate aldolase/phosphatase.
Nature, 478, 2011
1IUN
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BU of 1iun by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant hexagonal
Descriptor: ACETATE ION, meta-Cleavage product hydrolase
Authors:Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
Deposit date:2002-03-06
Release date:2002-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
3RI8
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Xylanase C from Aspergillus kawachii D37N mutant
Descriptor: Endo-1,4-beta-xylanase 3
Authors:Fushinobu, S, Uno, T, Kitaoka, M, Hayashi, K, Matsuzawa, H, Wakagi, T.
Deposit date:2011-04-13
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutational analysis of fungal family 11 xylanases on pH optimum determination
J.APPL.GLYOSCI., 58, 2011
1IUO
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BU of 1iuo by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with acetates
Descriptor: ACETATE ION, meta-Cleavage product hydrolase
Authors:Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
Deposit date:2002-03-06
Release date:2002-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002
1IUP
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BU of 1iup by Molmil
meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with isobutyrates
Descriptor: 2-METHYL-PROPIONIC ACID, meta-Cleavage product hydrolase
Authors:Fushinobu, S, Saku, T, Hidaka, M, Jun, S.-Y, Nojiri, H, Yamane, H, Shoun, H, Omori, T, Wakagi, T.
Deposit date:2002-03-06
Release date:2002-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of a meta-cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) complexed with cleavage products
PROTEIN SCI., 11, 2002

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