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PDB: 449 件
7YBD
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BU of 7ybd by Molmil
Crystal structure of sliding DNA clamp of Clostridioides difficile
分子名称: Beta sliding clamp, TRIETHYLENE GLYCOL
著者Hishiki, A, Okazaki, S, Hara, K, Hashimoto, H.
登録日2022-06-29
公開日2022-10-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of the sliding DNA clamp from the Gram-positive anaerobic bacterium Clostridioides difficile.
J.Biochem., 173, 2022
7Y9X
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BU of 7y9x by Molmil
Structure of the Cas7-11-Csx29-guide RNA complex
分子名称: CHAT domain-containing protein, CRISPR-associated RAMP family protein, ZINC ION, ...
著者Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H.
登録日2022-06-26
公開日2022-11-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.49 Å)
主引用文献RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease.
Science, 378, 2022
3A26
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BU of 3a26 by Molmil
Crystal structure of P. horikoshii TYW2 in complex with MeSAdo
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, TETRAETHYLENE GLYCOL, Uncharacterized protein PH0793
著者Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2009-04-28
公開日2009-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106, 2009
3A25
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BU of 3a25 by Molmil
Crystal structure of P. horikoshii TYW2 in complex with AdoMet
分子名称: S-ADENOSYLMETHIONINE, Uncharacterized protein PH0793
著者Umitsu, M, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2009-04-28
公開日2009-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2
Proc.Natl.Acad.Sci.USA, 106, 2009
6KAW
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BU of 6kaw by Molmil
Crystal structure of CghA
分子名称: CghA
著者Hara, K, Hashimoto, H, Yokoyama, M, Sato, M, Watanabe, K.
登録日2019-06-24
公開日2020-06-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Catalytic mechanism and endo-to-exo selectivity reversion of an octalin-forming natural Diels-Alderase
Nat Catal, 2021
6KBC
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BU of 6kbc by Molmil
Crystal structure of CghA with Sch210972
分子名称: (2S)-3-[(2S,4E)-4-[[(1R,2S,4aR,6S,8R,8aS)-2-[(E)-but-2-en-2-yl]-6,8-dimethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalen-1-yl]-oxidanyl-methylidene]-3,5-bis(oxidanylidene)pyrrolidin-2-yl]-2-methyl-2-oxidanyl-propanoic acid, CghA
著者Hara, K, Hashimoto, H, Maeda, N, Sato, M, Watanabe, K.
登録日2019-06-24
公開日2020-06-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Catalytic mechanism and endo-to-exo selectivity reversion of an octalin-forming natural Diels-Alderase
Nat Catal, 2021
6KJG
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BU of 6kjg by Molmil
Crystal structure of PsoF
分子名称: Dual-functional monooxygenase/methyltransferase psoF
著者Hara, K, Hashimoto, H, Matsushita, T, Tsunematsu, Y, Watanabe, K.
登録日2019-07-22
公開日2019-09-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Functional and Structural Analyses oftrans C-Methyltransferase in Fungal Polyketide Biosynthesis.
Biochemistry, 58, 2019
3WRI
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BU of 3wri by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of P450cam intermediate
To be Published
3WRM
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BU of 3wrm by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of P450cam intermedite
To be published
3WRJ
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BU of 3wrj by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of P450cam intermedite
to be published
3WRL
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BU of 3wrl by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of P450cam intermedite
To be published
3WRK
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BU of 3wrk by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.609 Å)
主引用文献Structure of P450cam intermedite
To be Published
3B0T
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BU of 3b0t by Molmil
Human VDR ligand binding domain in complex with maxacalcitol
分子名称: (1S,3R,5Z,7E,14beta,17alpha,20S)-20-(3-hydroxy-3-methylbutoxy)-9,10-secopregna-5,7,10-triene-1,3-diol, SULFATE ION, Vitamin D3 receptor
著者Hishiki, A, Hashimoto, H, Sato, M, Shimizu, T.
登録日2011-06-14
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Human VDR ligand binding domain in complex with maxacalcitol
To be Published
3B0R
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BU of 3b0r by Molmil
Human PPAR gamma ligand binding dmain complexed with GW9662 in a covalent bonded form
分子名称: 2-chloro-5-nitro-N-phenylbenzamide, Peroxisome proliferator-activated receptor gamma
著者Tomioka, D, Hashimoto, H, Sato, M, Shimizu, T.
登録日2011-06-13
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Human PPAR gamma ligand binding dmain complexed with GW9662 in a covalent bonded form
To be published
2ZWT
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BU of 2zwt by Molmil
Crystal Structure of Ferric Cytochrome P450cam
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
著者Sakurai, K, Shimada, H, Hayashi, T, Tsukihara, T.
登録日2008-12-18
公開日2009-02-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Substrate binding induces structural changes in cytochrome P450cam
Acta Crystallogr.,Sect.F, 65, 2009
1FLY
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BU of 1fly by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-15
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.833 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
2ZAX
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BU of 2zax by Molmil
Crystal Structure of Ferric Cytochrome P450cam
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Cytochrome P450-cam, ...
著者Sakurai, K, Shimada, H, Harada, K, Hayashi, T, Tsukihara, T.
登録日2007-10-11
公開日2008-01-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Evaluation of the functional role of the heme-6-propionate side chain in cytochrome P450cam
J.Am.Chem.Soc., 130, 2008
1FLQ
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BU of 1flq by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-15
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FLU
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BU of 1flu by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-15
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.785 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
2Z97
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BU of 2z97 by Molmil
Crystal Structure of Ferric Cytochrome P450cam Reconstituted with 7-Methyl-7-depropionated Hemin
分子名称: 7-METHYL-7-DEPROPIONATEHEMIN, CAMPHOR, Cytochrome P450-cam, ...
著者Hayashi, T, Harada, K, Sakurai, K, Hirota, S, Shimada, H.
登録日2007-09-18
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A role of the heme-7-propionate side chain in cytochrome P450cam as a gate for regulating the access of water molecules to the substrate-binding site
J.Am.Chem.Soc., 131, 2009
1FN5
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BU of 1fn5 by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-21
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FLW
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BU of 1flw by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-15
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.812 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1J3C
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BU of 1j3c by Molmil
Solution structure of the C-terminal domain of the HMGB2
分子名称: High mobility group protein 2
著者Kurita, J, Shimahara, H, Yoshida, M, Tate, S.
登録日2003-01-23
公開日2004-05-25
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Strucutral comparison of two HMG-boxes in the non-histone protein HMG-2 with in the HMG-1
To be Published
1J3X
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BU of 1j3x by Molmil
Solution structure of the N-terminal domain of the HMGB2
分子名称: High mobility group protein 2
著者Kurita, J, Shimahara, H, Yoshida, M, Tate, S.
登録日2003-02-19
公開日2004-06-29
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Strucutral comparison of two HMG-boxes in the non-histone protein HMG-2 with in the HMG-1
To be Published
2ZAW
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BU of 2zaw by Molmil
Crystal Structure of Ferric Cytochrome P450cam Reconstituted with 6-Methyl-6-depropionated Hemin
分子名称: 6-METHY-6-DEPROPIONATEHEMIN, CAMPHOR, CHLORIDE ION, ...
著者Harada, K, Sakurai, K, Shimada, H, Tsukihara, T, Hayashi, T.
登録日2007-10-11
公開日2008-01-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Evaluation of the functional role of the heme-6-propionate side chain in cytochrome P450cam
J.Am.Chem.Soc., 130, 2008

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