Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 626 件
3GYO
DownloadVisualize
BU of 3gyo by Molmil
Se-Met Rtt106p
分子名称: Histone chaperone RTT106
著者Liu, Y, Huang, H, Shi, Y, Teng, M.
登録日2009-04-04
公開日2009-12-08
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural analysis of Rtt106p reveals a DNA-binding role required for heterochromatin silencing
J.Biol.Chem., 285, 2010
4LWP
DownloadVisualize
BU of 4lwp by Molmil
Crystal structure of PRMT6-SAH
分子名称: Arginine N-methyltransferase, putative, IODIDE ION, ...
著者Zhu, Y, Wang, C, Shi, Y, Teng, M.
登録日2013-07-28
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.353 Å)
主引用文献Crystal Structure of Arginine Methyltransferase 6 from Trypanosoma brucei
Plos One, 9, 2014
4LWO
DownloadVisualize
BU of 4lwo by Molmil
Crystal structure of PRMT6
分子名称: Arginine N-methyltransferase, putative
著者Zhu, Y, Wang, C, Shi, Y, Teng, M.
登録日2013-07-28
公開日2014-02-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献Crystal Structure of Arginine Methyltransferase 6 from Trypanosoma brucei
Plos One, 9, 2014
3T7K
DownloadVisualize
BU of 3t7k by Molmil
Complex structure of Rtt107p and phosphorylated histone H2A
分子名称: Histone H2A.1, Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.028 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
4M78
DownloadVisualize
BU of 4m78 by Molmil
Crystal structure of Lsm2-8 complex, space group P21
分子名称: U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3, U6 snRNA-associated Sm-like protein LSm4, ...
著者Zhou, L, Hang, J, Zhou, Y, Wan, R, Lu, G, Yan, C, Shi, Y.
登録日2013-08-12
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.794 Å)
主引用文献Crystal structures of the Lsm complex bound to the 3' end sequence of U6 small nuclear RNA.
Nature, 506, 2014
3GYP
DownloadVisualize
BU of 3gyp by Molmil
Rtt106p
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Histone chaperone RTT106
著者Liu, Y, Huang, H, Shi, Y, Teng, M.
登録日2009-04-04
公開日2009-12-08
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.406 Å)
主引用文献Structural analysis of Rtt106p reveals a DNA-binding role required for heterochromatin silencing
J.Biol.Chem., 285, 2010
2NRF
DownloadVisualize
BU of 2nrf by Molmil
Crystal Structure of GlpG, a Rhomboid family intramembrane protease
分子名称: Protein GlpG
著者Wu, Z, Yan, N, Feng, L, Yan, H, Gu, L, Shi, Y.
登録日2006-11-02
公開日2006-11-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entry.
Nat.Struct.Mol.Biol., 13, 2006
5E5W
DownloadVisualize
BU of 5e5w by Molmil
Hemagglutinin-esterase-fusion mutant structure of influenza D virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin-esterase, ...
著者Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2015-10-09
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
PLoS Pathog., 12, 2016
3T7J
DownloadVisualize
BU of 3t7j by Molmil
Crystal structure of Rtt107p (residues 820-1070)
分子名称: Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.042 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
2H60
DownloadVisualize
BU of 2h60 by Molmil
Solution Structure of Human Brg1 Bromodomain
分子名称: Probable global transcription activator SNF2L4
著者Shen, W, Xu, C, Zhang, J, Wu, J, Shi, Y.
登録日2006-05-30
公開日2007-02-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of human Brg1 bromodomain and its specific binding to acetylated histone tails
Biochemistry, 46, 2007
4M9R
DownloadVisualize
BU of 4m9r by Molmil
Crystal structure of CED-3
分子名称: Cell death protein 3
著者Xu, Y, Jeffrey, P.D, Shi, Y.G.
登録日2013-08-15
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.656 Å)
主引用文献Mechanistic insights into CED-4-mediated activation of CED-3
Genes Dev., 27, 2013
2GP5
DownloadVisualize
BU of 2gp5 by Molmil
Crystal structure of catalytic core domain of jmjd2A complexed with alpha-Ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, Jumonji domain-containing protein 2A, ...
著者Chen, Z, Zang, J, Whetstine, J, Hong, X, Davrazou, F, Kutateladze, T.G, Simpson, M, Dai, S, Hagman, J, Shi, Y, Zhang, G.
登録日2006-04-16
公開日2006-05-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural insights into histone demethylation by JMJD2 family members
Cell(Cambridge,Mass.), 125, 2006
3T7I
DownloadVisualize
BU of 3t7i by Molmil
Crystal structure of Se-Met Rtt107p (residues 820-1070)
分子名称: Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
2NWM
DownloadVisualize
BU of 2nwm by Molmil
Solution structure of the first SH3 domain of human Vinexin and its interaction with the peptides from Vinculin
分子名称: Vinexin
著者Zhang, J, Yao, B, Wu, J, Shi, Y.
登録日2006-11-15
公開日2007-04-24
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the first SH3 domain of human vinexin and its interaction with vinculin peptides
Biochem.Biophys.Res.Commun., 357, 2007
2GP3
DownloadVisualize
BU of 2gp3 by Molmil
Crystal structure of the catalytic core domain of jmjd2a
分子名称: FE (II) ION, Jumonji domain-containing protein 2A, ZINC ION
著者Chen, Z, Zang, J, Whetstine, J, Hong, X, Davrazou, F, Kutateladze, T.G, Simpson, M, Dai, S, Hagman, J, Shi, Y, Zhang, G.
登録日2006-04-16
公開日2006-05-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural insights into histone demethylation by JMJD2 family members
Cell(Cambridge,Mass.), 125, 2006
5E62
DownloadVisualize
BU of 5e62 by Molmil
HEF-mut with Tr323 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-azidoethyl 2-acetamido-2-deoxy-beta-D-glucopyranoside, ...
著者Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2015-10-09
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
PLoS Pathog., 12, 2016
5E65
DownloadVisualize
BU of 5e65 by Molmil
The complex structure of Hemagglutinin-esterase-fusion mutant protein from the influenza D virus with receptor analog 9-O-Ac-3'SLN (Tr322)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid-(2-3)-beta-D-galactopyranose, ...
著者Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2015-10-09
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
PLoS Pathog., 12, 2016
5E64
DownloadVisualize
BU of 5e64 by Molmil
Hemagglutinin-esterase-fusion protein structure of influenza D virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, ...
著者Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2015-10-09
公開日2016-03-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
PLoS Pathog., 12, 2016
4N40
DownloadVisualize
BU of 4n40 by Molmil
Crystal structure of human Epithelial cell-transforming sequence 2 protein
分子名称: Protein ECT2
著者Zou, Y, Shao, Z.H, Li, F.D, Gong, D, Wang, C, Gong, Q, Shi, Y.
登録日2013-10-08
公開日2014-08-27
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (3.106 Å)
主引用文献Crystal structure of triple-BRCT-domain of ECT2 and insights into the binding characteristics to CYK-4
Febs Lett., 588, 2014
3U82
DownloadVisualize
BU of 3u82 by Molmil
Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion
分子名称: Envelope glycoprotein D, Poliovirus receptor-related protein 1
著者Zhang, N, Yan, J, Lu, G, Guo, Z, Fan, Z, Wang, J, Shi, Y, Qi, J, Gao, G.F.
登録日2011-10-15
公開日2012-03-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.164 Å)
主引用文献Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion.
Nat Commun, 2, 2011
5FCG
DownloadVisualize
BU of 5fcg by Molmil
Crystal structure of Bcl-2 in complex with HBx-BH3 motif
分子名称: Apoptosis regulator Bcl-2, Protein X
著者Jiang, T.Y, Liu, M.H, Wu, J.P, Shi, Y.G.
登録日2015-12-15
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and biochemical analysis of Bcl-2 interaction with the hepatitis B virus protein HBx
Proc.Natl.Acad.Sci.USA, 2016
2I7K
DownloadVisualize
BU of 2i7k by Molmil
Solution Structure of the Bromodomain of Human BRD7 Protein
分子名称: Bromodomain-containing protein 7
著者Sun, H, Liu, J, Zhang, J, Huang, H, Wu, J, Shi, Y.
登録日2006-08-31
公開日2007-07-10
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of BRD7 bromodomain and its interaction with acetylated peptides from histone H3 and H4
Biochem.Biophys.Res.Commun., 358, 2007
2P5B
DownloadVisualize
BU of 2p5b by Molmil
The complex structure of JMJD2A and trimethylated H3K36 peptide
分子名称: FE (II) ION, Histone H3, JmjC domain-containing histone demethylation protein 3A, ...
著者Zhang, G, Chen, Z, Zang, J, Hong, X, Shi, Y.
登録日2007-03-14
公開日2007-06-12
最終更新日2013-11-27
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural basis of the recognition of a methylated histone tail by JMJD2A.
Proc.Natl.Acad.Sci.USA, 104, 2007
3JCE
DownloadVisualize
BU of 3jce by Molmil
Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
分子名称: 16S ribosomal RNA, 23 ribosomal RNA, 30S ribosomal protein S10, ...
著者Zhang, D, Yan, K, Liu, G, Song, G, Luo, J, Shi, Y, Cheng, E, Wu, S, Jiang, T, Low, J, Gao, N, Qin, Y.
登録日2015-12-01
公開日2016-01-13
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献EF4 disengages the peptidyl-tRNA CCA end and facilitates back-translocation on the 70S ribosome
Nat. Struct. Mol. Biol., 23, 2016
2PPH
DownloadVisualize
BU of 2pph by Molmil
solution structure of human MEKK3 PB1 domain
分子名称: Mitogen-activated protein kinase kinase kinase 3
著者Hu, Q, Zhang, J, Wu, J, Shi, Y.
登録日2007-04-30
公開日2007-05-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Insight into the Binding Properties of MEKK3 PB1 to MEK5 PB1 from Its Solution Structure.
Biochemistry, 46, 2007

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon