PDB Search results for query - Protein Data Bank Japan

PDB: 1502 results

Mutant L160M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ...
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-03-27
Release date:	2007-10-02
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Mutant L160M structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2ED3

Mutant I127M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-02-14
Release date:	2007-08-14
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Mutant I127M structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2EMU

Mutant L21H structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-03-28
Release date:	2007-10-02
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Mutant L21H structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2ENU

Mutant L121M structure of TTHB049 from Thermus thermophilus HB8
Descriptor:	Alpha-ribazole-5'-phosphate phosphatase, GLYCEROL
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-03-28
Release date:	2007-10-02
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Mutant L121M structure of TTHB049 from Thermus thermophilus HB8 To be Published

2EMR

Mutant L65M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-03-28
Release date:	2007-10-02
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Mutant L65M structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2EN5

Mutant R262H structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ...
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-03-28
Release date:	2007-10-02
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Mutant R262H structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2E4N

Mutant V251M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2006-12-13
Release date:	2007-06-19
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Mutant V251M structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2EH4

Mutant T146M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-03-04
Release date:	2007-09-04
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Mutant T146M structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2ED5

Mutant S147M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ...
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-02-14
Release date:	2007-08-14
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Mutant S147M structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2ELE

Mutant V18C structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-03-27
Release date:	2007-10-02
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Mutant V18C structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

2EH5

Mutant L184M structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor:	S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2007-03-04
Release date:	2007-09-04
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Mutant L184M structure of PH0725 from Pyrococcus horikoshii OT3 To be Published

1V7Y

Crystal structure of tryptophan synthase alpha-subunit from Escherichia coli at room temperature
Descriptor:	SULFATE ION, Tryptophan synthase alpha chain
Authors:	Nishio, K, Morimoto, Y, Ishizuka, M, Ogasahara, K, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2003-12-25
Release date:	2005-02-15
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Conformational Changes in the alpha-Subunit Coupled to Binding of the beta(2)-Subunit of Tryptophan Synthase from Escherichia coli: Crystal Structure of the Tryptophan Synthase alpha-Subunit Alon Biochemistry, 44, 2005

1WLF

Structure of the N-terminal domain of PEX1 AAA-ATPase: Characterization of a putative adaptor-binding domain
Descriptor:	Peroxisome biogenesis factor 1, SULFATE ION
Authors:	Shiozawa, K, Maita, N, Tomii, K, Seto, A, Goda, N, Tochio, H, Akiyama, Y, Shimizu, T, Shirakawa, M, Hiroaki, H.
Deposit date:	2004-06-25
Release date:	2004-09-07
Last modified:	2024-03-13
Method:	X-RAY DIFFRACTION (2.05 Å)
Cite:	Structure of the N-terminal Domain of PEX1 AAA-ATPase: CHARACTERIZATION OF A PUTATIVE ADAPTOR-BINDING DOMAIN J.Biol.Chem., 279, 2004

1WQ5

Crystal structure of tryptophan synthase alpha-subunit from Escherichia coli
Descriptor:	GLYCEROL, SULFATE ION, Tryptophan synthase alpha chain
Authors:	Nishio, K, Morimoto, Y, Ishizuka, M, Ogasahara, K, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-09-22
Release date:	2005-02-15
Last modified:	2024-04-03
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Conformational Changes in the alpha-Subunit Coupled to Binding of the beta(2)-Subunit of Tryptophan Synthase from Escherichia coli: Crystal Structure of the Tryptophan Synthase alpha-Subunit Alon Biochemistry, 44, 2005

2ZPG

Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 120min at 293K
Descriptor:	FE (III) ION, MAGNESIUM ION, Nitrile hydratase subunit alpha, ...
Authors:	Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
Deposit date:	2008-07-11
Release date:	2008-10-21
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.39 Å)
Cite:	Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008

2ZPE

nitrosylated Fe-type nitrile hydratase with tert-butylisonitrile
Descriptor:	FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
Authors:	Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
Deposit date:	2008-07-10
Release date:	2008-10-21
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.48 Å)
Cite:	Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008

2ZPF

Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 18min at 293K
Descriptor:	FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
Authors:	Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
Deposit date:	2008-07-11
Release date:	2008-10-21
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.482 Å)
Cite:	Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008

2ZPI

Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 440min at 293K
Descriptor:	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ...
Authors:	Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
Deposit date:	2008-07-11
Release date:	2008-10-21
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.491 Å)
Cite:	Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008

2ZPB

nitrosylated Fe-type nitrile hydratase
Descriptor:	FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
Authors:	Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
Deposit date:	2008-07-09
Release date:	2008-10-21
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.3 Å)
Cite:	Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008

2ZPH

Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 340min at 293K
Descriptor:	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ...
Authors:	Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
Deposit date:	2008-07-11
Release date:	2008-10-21
Last modified:	2023-11-15
Method:	X-RAY DIFFRACTION (1.59 Å)
Cite:	Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile J.Biol.Chem., 283, 2008

2ZV3

Crystal structure of project MJ0051 from Methanocaldococcus jannaschii DSM 2661
Descriptor:	Peptidyl-tRNA hydrolase
Authors:	Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2008-10-31
Release date:	2009-05-05
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Crystal structure of project MJ0051 from Methanocaldococcus jannaschii DSM 2661 To be published

1V8G

Crystal structure of anthranilate phosphoribosyltransferase (TrpD) from Thermus thermophilus HB8
Descriptor:	anthranilate phosphoribosyltransferase
Authors:	Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-01-08
Release date:	2004-01-20
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Crystal structure of anthranilate phosphoribosyltransferase (TrpD) from Thermus thermophilus HB8 To be Published

1X1O

Crystal structure of project ID TT0268 from Thermus thermophilus HB8
Descriptor:	nicotinate-nucleotide pyrophosphorylase
Authors:	Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2005-04-08
Release date:	2006-04-04
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal structure of project ID TT0268 from Thermus thermophilus HB8 To be Published

1WN2

Crystal structure of project ID PH1539 from Pyrococcus horikoshii OT3
Descriptor:	Peptidyl-tRNA hydrolase, SODIUM ION
Authors:	Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-07-26
Release date:	2005-07-19
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.2 Å)
Cite:	Structure of peptidyl-tRNA hydrolase 2 from Pyrococcus horikoshii OT3: insight into the functional role of its dimeric state. Acta Crystallogr.,Sect.D, 64, 2008

1WU8

Crystal structure of project PH0463 from Pyrococcus horikoshii OT3
Descriptor:	ADENOSINE, hypothetical protein PH0463
Authors:	Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:	2004-12-02
Release date:	2005-11-29
Last modified:	2011-07-13
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Crystal structure of project ID PH0463 from Pyrococcus horikoshii OT3 To be Published

<7 8 9 10 11 12 131415 16 17 18 19 20 21 22 >

Total results:	1502
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Shi, K"