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PDB: 233 results

4IR1
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BU of 4ir1 by Molmil
Polymerase-DNA Complex
Descriptor: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Sharma, A, Nair, D.T.
Deposit date:2013-01-14
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.
Nucleic Acids Res., 41, 2013
4IR9
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Polymerase-DNA complex
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(P*CP*TP*AP*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Sharma, A, Nair, D.T.
Deposit date:2013-01-14
Release date:2013-04-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:A strategically located serine residue is critical for the mutator activity of DNA polymerase IV from Escherichia coli.
Nucleic Acids Res., 41, 2013
5O7A
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BU of 5o7a by Molmil
Quinolin-6-yloxyacetamides are microtubule destabilizing agents that bind to the colchicine site of tubulin
Descriptor: (2~{R})-2-(3-ethynylquinolin-6-yl)oxy-2-methoxy-~{N}-[(1~{E})-1-methoxyimino-2-methyl-propan-2-yl]ethanamide, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Sharma, A, Olieric, N, Steinmetz, M.O.
Deposit date:2017-06-08
Release date:2017-07-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.495 Å)
Cite:Quinolin-6-Yloxyacetamides Are Microtubule Destabilizing Agents That Bind to the Colchicine Site of Tubulin.
Int J Mol Sci, 18, 2017
2OGW
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BU of 2ogw by Molmil
Structure of ABC type zinc transporter from E. coli
Descriptor: High-affinity zinc uptake system protein znuA precursor, ZINC ION
Authors:Sharma, A, Yogavel, M.
Deposit date:2007-01-09
Release date:2007-03-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Analysis of ABC-family Periplasmic Zinc Binding Protein Provides New Insights Into Mechanism of Ligand Uptake and Release
J.Mol.Biol., 367, 2007
6S8L
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Structure, Thermodynamics, and Kinetics of Plinabulin Binding to two Tubulin Isotypes
Descriptor: (3Z,6Z)-3-benzylidene-6-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]piperazine-2,5-dione, Designed ankyrin repeat protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Sharma, A, Olieric, N, Steinmetz, M.
Deposit date:2019-07-10
Release date:2019-11-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structure, Thermodynamics, and Kinetics of Plinabulin Binding to Two Tubulin Isotypes
Chem, 2019
3VGJ
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BU of 3vgj by Molmil
Crystal of Plasmodium falciparum tyrosyl-tRNA synthetase (PfTyrRS)in complex with adenylate analog
Descriptor: ADENOSINE MONOPHOSPHATE, TYROSINE, Tyrosyl-tRNA synthetase, ...
Authors:Banday, M.M, Yogavel, M, Bhatt, T.K, Khan, S, Sharma, A, Sharma, A.
Deposit date:2011-08-14
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.212 Å)
Cite:Malaria parasite tyrosyl-tRNA synthetase secretion triggers pro-inflammatory responses.
Nat Commun, 2, 2011
4V5K
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Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Ng, C.L, Lang, K, Meenan, N.A.G, Sharma, A, Kelley, A.C, Kleanthous, C, Ramakrishnan, V.
Deposit date:2010-05-29
Release date:2014-07-09
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural Basis for 16S Ribosomal RNA Cleavage by the Cytotoxic Domain of Colicin E3.
Nat.Struct.Mol.Biol., 17, 2010
6L4Q
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BU of 6l4q by Molmil
Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with L-lysine and Clado-B
Descriptor: (3R)-3-[[(3R)-3-methylpiperidin-1-yl]methyl]-6,8-bis(oxidanyl)-3,4-dihydroisochromen-1-one, LYSINE, Lysine--tRNA ligase
Authors:Babbar, P, Sharma, A, Manickam, Y, Mishra, S, Harlos, K.
Deposit date:2019-10-19
Release date:2021-05-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with L-lysine and Cladosporin inhibitor, Cla-B
Chembiochem, 2021
6L3Y
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BU of 6l3y by Molmil
Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with L-lysine and Clado-C
Descriptor: (3R)-3-[[(3S)-3-ethylpiperidin-1-yl]methyl]-6,8-bis(oxidanyl)-3,4-dihydroisochromen-1-one, LYSINE, Lysine--tRNA ligase, ...
Authors:Babbar, P, Sharma, A, Mishra, S, Manickam, Y, Harlos, K.
Deposit date:2019-10-15
Release date:2021-05-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with L-lysine and Cladosporin inhibitor, Cla-B
Chembiochem, 2021
5TN9
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Crystal Structure of the ER-alpha Ligand-binding Domain (L372S,L536S) in Complex with the OBHS-BSC, 4-bromophenyl (1R,2R,4S)-5-(4-hydroxyphenyl)-6-(4-(2-(piperidin-1-yl)ethoxy)phenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate
Descriptor: 4-bromophenyl (1S,2R,4S)-5-(4-hydroxyphenyl)-6-{4-[2-(piperidin-1-yl)ethoxy]phenyl}-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate, Estrogen receptor
Authors:Nwachukwu, J.C, Sharma, N, Carlson, K.E, Srinivasan, S, Sharma, A, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2016-10-13
Release date:2017-02-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.253 Å)
Cite:Exploring the Structural Compliancy versus Specificity of the Estrogen Receptor Using Isomeric Three-Dimensional Ligands.
ACS Chem. Biol., 12, 2017
5TNB
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BU of 5tnb by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (L372S,L536S) in Complex with the OBHS-BSC, 4-bromophenyl (1R,2R,4S)-6-(4-(2-(dimethylamino)ethoxy)phenyl)-5-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate
Descriptor: 4-bromophenyl (1S,2R,4S)-6-{4-[2-(dimethylamino)ethoxy]phenyl}-5-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate, Estrogen receptor
Authors:Nwachukwu, J.C, Sharma, N, Carlson, K.E, Srinivasan, S, Sharma, A, Katzenellenbogen, J.A, Nettles, K.W.
Deposit date:2016-10-13
Release date:2017-02-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Exploring the Structural Compliancy versus Specificity of the Estrogen Receptor Using Isomeric Three-Dimensional Ligands.
ACS Chem. Biol., 12, 2017
5IP4
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BU of 5ip4 by Molmil
X-RAY STRUCTURE OF THE C-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN
Descriptor: Neuronal migration protein doublecortin, XA4551 NANOBODY AGAINST C-DCX
Authors:Ruf, A, Benz, J, Burger, D, D'Arcy, B, Debulpaep, M, Di Lello, P, Fry, D, Huber, W, Kremer, T, Laeremans, T, Matile, H, Ross, A, Rudolph, M.G, Rufer, A.C, Sharma, A, Steinmetz, M.O, Steyaert, J, Schoch, G, Stihle, M, Thoma, R.
Deposit date:2016-03-09
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies.
J.Biol.Chem., 291, 2016
5IO9
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BU of 5io9 by Molmil
X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN
Descriptor: Neuronal migration protein doublecortin
Authors:Ruf, A, Benz, J, Burger, D, D'Arcy, B, Debulpaep, M, Di Lello, P, Fry, D, Huber, W, Kremer, T, Laeremans, T, Matile, H, Ross, A, Rudolph, M.G, Rufer, A.C, Sharma, A, Steinmetz, M.O, Steyaert, J, Schoch, G, Stihle, M, Thoma, R.
Deposit date:2016-03-08
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies.
J.Biol.Chem., 291, 2016
4UAV
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BU of 4uav by Molmil
Crystal structure of CbbY (AT3G48420) from Arabidobsis thaliana
Descriptor: Haloacid dehalogenase-like hydrolase domain-containing protein At3g48420, MAGNESIUM ION
Authors:Bracher, A, Sharma, A, Starling-Windhof, A, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2014-08-11
Release date:2014-12-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Degradation of potent Rubisco inhibitor by selective sugar phosphatase.
Nat.Plants, 1, 2015
4UAU
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BU of 4uau by Molmil
Crystal structure of CbbY (mutant D10N) from Rhodobacter sphaeroides in complex with Xylulose-(1,5)bisphosphate, crystal form II
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, Protein CbbY, ...
Authors:Bracher, A, Sharma, A, Starling-Windhof, A, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2014-08-11
Release date:2014-12-31
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Degradation of potent Rubisco inhibitor by selective sugar phosphatase.
Nat.Plants, 1, 2015
7EQU
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BU of 7equ by Molmil
Crystal structure of the C-lobe of lactoferrin produced by limited proteolysis using pepsin at 2.74A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BICARBONATE ION, FE (III) ION, ...
Authors:Maurya, A, Singh, J, Sharma, A, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2021-05-04
Release date:2021-05-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.743 Å)
Cite:Crystal structure of the C-lobe of lactoferrin produced by limited proteolysis using pepsin at 2.74A resolution
To Be Published
7WAL
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BU of 7wal by Molmil
Glutamyl-tRNA synthetase from Plasmodium falciparum (PfERS) in complex with Co
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, COBALT (II) ION, ...
Authors:Sharma, V, Manickam, Y, Babbar, P, Sharma, A.
Deposit date:2021-12-14
Release date:2022-12-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural characterization of glutamyl-tRNA synthetase (GluRS) from Plasmodium falciparum.
Mol.Biochem.Parasitol., 253, 2022
7WAK
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BU of 7wak by Molmil
Glutamyl-tRNA synthetase from Plasmodium falciparum (PfERS) in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Glutamyl-tRNA synthetase, ...
Authors:Sharma, V, Manickam, Y, Babbar, P, Sharma, A.
Deposit date:2021-12-14
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.782 Å)
Cite:Structural characterization of glutamyl-tRNA synthetase (GluRS) from Plasmodium falciparum.
Mol.Biochem.Parasitol., 253, 2022
7WAJ
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BU of 7waj by Molmil
Glutamyl-tRNA synthetase from Plasmodium falciparum (PfERS) complexed with ATP and Co
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ...
Authors:Sharma, V, Manickam, Y, Babbar, P, Sharma, A.
Deposit date:2021-12-14
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.254 Å)
Cite:Structural characterization of glutamyl-tRNA synthetase (GluRS) from Plasmodium falciparum.
Mol.Biochem.Parasitol., 253, 2022
7WAO
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BU of 7wao by Molmil
Glutamyl-tRNA synthetase from Plasmodium falciparum (PfERS) in complex with Mn
Descriptor: CHLORIDE ION, Glutamyl-tRNA synthetase, MANGANESE (II) ION
Authors:Sharma, V, Manickam, Y, Babbar, P, Sharma, A.
Deposit date:2021-12-14
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.582 Å)
Cite:Structural characterization of glutamyl-tRNA synthetase (GluRS) from Plasmodium falciparum.
Mol.Biochem.Parasitol., 253, 2022
7WAI
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BU of 7wai by Molmil
Glutamyl-tRNA synthetase from Plasmodium falciparum (PfERS)
Descriptor: CHLORIDE ION, Glutamyl-tRNA synthetase
Authors:Sharma, V, Manickam, Y, Harlos, K, Sharma, A.
Deposit date:2021-12-14
Release date:2022-12-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:Structural characterization of glutamyl-tRNA synthetase (GluRS) from Plasmodium falciparum.
Mol.Biochem.Parasitol., 253, 2022
7DPI
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BU of 7dpi by Molmil
Plasmodium falciparum cytoplasmic Phenylalanyl-tRNA synthetase in complex with BRD7929
Descriptor: (8R,9S,10S)-10-[(dimethylamino)methyl]-N-(4-methoxyphenyl)-9-[4-(2-phenylethynyl)phenyl]-1,6-diazabicyclo[6.2.0]decane-6-carboxamide, MAGNESIUM ION, Phenylalanine--tRNA ligase, ...
Authors:Manmohan, S, Malhotra, N, Harlos, K, Manickam, Y, Sharma, A.
Deposit date:2020-12-19
Release date:2022-03-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.597 Å)
Cite:Inhibition of Plasmodium falciparum phenylalanine tRNA synthetase provides opportunity for antimalarial drug development.
Structure, 30, 2022
5Z79
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BU of 5z79 by Molmil
Crystal Structure Analysis of the HPPK-DHPS in complex with substrates
Descriptor: 4-AMINOBENZOIC ACID, 5'-DEOXYADENOSINE, 6-HYDROXYMETHYLPTERIN-DIPHOSPHATE, ...
Authors:Manickam, Y, Karl, H, Sharma, A.
Deposit date:2018-01-27
Release date:2018-08-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase-dihydropteroate synthase fromPlasmodium vivaxsheds light on drug resistance
J. Biol. Chem., 293, 2018
6AGT
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BU of 6agt by Molmil
Crystal structure of PfKRS complexed with chromone inhibitor
Descriptor: COBALT (II) ION, FORMIC ACID, LYSINE, ...
Authors:Yogavel, M, Sharma, A, Sharma, A, Baragana, B, Walpole, C.
Deposit date:2018-08-14
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:Lysyl-tRNA synthetase as a drug target in malaria and cryptosporidiosis.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5ZKG
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BU of 5zkg by Molmil
Crystal Structure of C-terminal Domain of Plasmodium vivax p43
Descriptor: Aminoacyl-tRna synthetase-interacting multifunctional protein P43
Authors:Gupta, S, Sharma, M, Manickam, Y, Sharma, A.
Deposit date:2018-03-23
Release date:2019-04-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structures of the two domains that constitute the Plasmodium vivax p43 protein.
Acta Crystallogr D Struct Biol, 76, 2020

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