Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 173 results

4Q9E
DownloadVisualize
BU of 4q9e by Molmil
Structure of the ternary complex of peptidoglycan recognition protein, PGRP-S with N-acetyl glucosamine and paranitro benzaldehyde at 2.3 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-nitrobenzaldehyde, GLYCEROL, ...
Authors:Yamini, S, Sharma, P, Yadav, S.P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-05-01
Release date:2014-05-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure of the ternary complex of peptidoglycan recognition protein, PGRP-S with N-acetyl glucosamine and paranitro benzaldehyde at 2.3 A resolution
to be published
7EQU
DownloadVisualize
BU of 7equ by Molmil
Crystal structure of the C-lobe of lactoferrin produced by limited proteolysis using pepsin at 2.74A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BICARBONATE ION, FE (III) ION, ...
Authors:Maurya, A, Singh, J, Sharma, A, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2021-05-04
Release date:2021-05-19
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.743 Å)
Cite:Crystal structure of the C-lobe of lactoferrin produced by limited proteolysis using pepsin at 2.74A resolution
To Be Published
3NNO
DownloadVisualize
BU of 3nno by Molmil
Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with Alpha-Rhamnose at 2.9 A resolution
Descriptor: L(+)-TARTARIC ACID, Peptidoglycan recognition protein 1, alpha-L-rhamnopyranose
Authors:Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2010-06-24
Release date:2010-07-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with Alpha-Rhamnose at 2.9 A resolution
To be Published
5YLA
DownloadVisualize
BU of 5yla by Molmil
Crystal structure of a dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.67 A resolution
Descriptor: Peptidyl-tRNA hydrolase
Authors:Singh, P.K, Sharma, P, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2017-10-17
Release date:2017-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of a dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.67 A resolution
To Be Published
5YL8
DownloadVisualize
BU of 5yl8 by Molmil
The crystal structure of inactive dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.79 A resolution
Descriptor: Peptidyl-tRNA hydrolase, SODIUM ION
Authors:Bairagya, H.R, Sharma, P, Iqbal, N, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2017-10-17
Release date:2017-11-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The crystal structure of inactive dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.79 A resolution
To Be Published
5YN4
DownloadVisualize
BU of 5yn4 by Molmil
Crystal structure of dimeric peptidyl tRNA hydrolase from Acinetobacter baumannii with occluded substrate binding site at 1.47 A resolution
Descriptor: Peptidyl-tRNA hydrolase
Authors:Singh, P.K, Sharma, P, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2017-10-24
Release date:2017-11-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Crystal structure of dimeric peptidyl tRNA hydrolase from Acinetobacter baumannii with occluded substrate binding site at 1.47 A resolution
To Be Published
6A31
DownloadVisualize
BU of 6a31 by Molmil
Crystal structure of Na+ bound Peptidyl-tRNA Hydrolase from Acinetobacter baumannii at 2.19 A resolution
Descriptor: Peptidyl-tRNA hydrolase, SODIUM ION
Authors:Bairagya, H.R, Sharma, P, Singh, P.K, Sharma, S, Singh, T.P.
Deposit date:2018-06-14
Release date:2018-06-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal structure of Na+ bound Peptidyl-tRNA Hydrolase from Acinetobacter baumannii at 2.19 A resolution
To Be Published
7ENU
DownloadVisualize
BU of 7enu by Molmil
Crystal structure of iron-saturated C-terminal half of lactoferrin produced proteolytically using pepsin at 2.32A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Singh, J, Maurya, A, Viswanathan, V, Singh, P.K, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2021-04-19
Release date:2021-05-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.322 Å)
Cite:Crystal structure of iron-saturated C-terminal half of lactoferrin produced proteolytically using pepsin at 2.32A resolution
To Be Published
6A89
DownloadVisualize
BU of 6a89 by Molmil
Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
Descriptor: 1,2-ETHANEDIOL, 2,6-DIAMINOPIMELIC ACID, GLYCEROL, ...
Authors:Bairagya, H.R, Shokeen, A, Sharma, P, Singh, P.K, Sharma, S, Singh, T.P.
Deposit date:2018-07-06
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of the ternary complex of peptidoglycan recognition protein (PGRP-S) with Tartaric acid, Ribose and 2,6-DIAMINOPIMELIC ACID at 2.11 A resolution
To Be Published
7DY5
DownloadVisualize
BU of 7dy5 by Molmil
Structure of the ternary complex of peptidoglycan recognition protein-short (PGRP-S) with hexanoic acid and tartaric acid at 2.30A resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Maurya, A, Viswanathan, V, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2021-01-20
Release date:2021-02-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the ternary complex of peptidoglycan recognition protein-short (PGRP-S)
To Be Published
7DAO
DownloadVisualize
BU of 7dao by Molmil
Crystal structure of native yak lactoperoxidase at 2.28 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Singh, P.K, Ahmad, N, Rani, C, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2020-10-16
Release date:2020-10-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of native yak lactoperoxidase at 2.28 A resolution
To Be Published
7DMR
DownloadVisualize
BU of 7dmr by Molmil
Crystal structure of potassium induced heme modification in yak lactoperoxidase at 2.20 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Singh, P.K, Rani, C, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2020-12-06
Release date:2020-12-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Potassium-induced partial inhibition of lactoperoxidase: structure of the complex of lactoperoxidase with potassium ion at 2.20 angstrom resolution.
J.Biol.Inorg.Chem., 26, 2021
7DE5
DownloadVisualize
BU of 7de5 by Molmil
Crystal structure of yak lactoperoxidase at 1.55 A resolution.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Singh, P.K, Viswanathan, V, Sharma, P, Rani, C, Ahmad, N, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2020-11-02
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of Yak Lactoperoxidase at 1.55 angstrom Resolution.
Protein J., 40, 2021
7DLQ
DownloadVisualize
BU of 7dlq by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF LACTOPEROXIDASE WITH HYDROGEN PEROXIDE AT 1.77A RESOLUTION
Descriptor: 1,2-ETHANEDIOL, 1-(OXIDOSULFANYL)METHANAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Singh, P.K, Sharma, P, Bhushan, A, Sharma, S, Singh, T.P.
Deposit date:2020-11-29
Release date:2020-12-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.773 Å)
Cite:Structure of a ternary complex of lactoperoxidase with iodide and hydrogen peroxide at 1.77 angstrom resolution.
J.Inorg.Biochem., 220, 2021
7D52
DownloadVisualize
BU of 7d52 by Molmil
Crystal structure of yak lactoperoxidase with a disordered propionic group of heme moiety at 2.20 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Singh, P.K, Rani, C, Ahmad, N, Sharma, P, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2020-09-24
Release date:2020-10-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Potassium-induced partial inhibition of lactoperoxidase: structure of the complex of lactoperoxidase with potassium ion at 2.20 angstrom resolution.
J.Biol.Inorg.Chem., 26, 2021
3QS0
DownloadVisualize
BU of 3qs0 by Molmil
Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with a bound N-acetylglucosamine in the diffusion channel at 2.5 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-02-19
Release date:2011-03-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with a bound N-acetylglucosamine in the diffusion channel AT 2.5 A resolution
To be Published
7EV0
DownloadVisualize
BU of 7ev0 by Molmil
Crystal structure of pepsin cleaved C-terminal half of lactoferrin at 2.7A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, ...
Authors:Singh, J, Ahmad, M.I, Maurya, A, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2021-05-19
Release date:2021-06-02
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of pepsin cleaved C-terminal half of lactoferrin at 2.7A resolution
To Be Published
7EVQ
DownloadVisualize
BU of 7evq by Molmil
Crystal structure of C-terminal half of lactoferrin obtained by limited proteolysis using pepsin at 2.6 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, BICARBONATE ION, ...
Authors:Viswanathan, V, Singh, J, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2021-05-21
Release date:2021-06-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of C-terminal half of lactoferrin obtained by limited proteolysis using pepsin at 2.6 A resolution
To Be Published
7FDW
DownloadVisualize
BU of 7fdw by Molmil
Crystal structure of pepsin cleaved lactoferrin C-lobe at 2.28 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CARBONATE ION, FE (III) ION, ...
Authors:Singh, P.K, Singh, J, Maurya, A, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2021-07-18
Release date:2021-08-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.277 Å)
Cite:A Peptide Bond from the Inter-lobe Segment in the Bilobal Lactoferrin Acts as a Preferred Site for Cleavage for Serine Proteases to Generate the Perfect C-lobe: Structure of the Pepsin Hydrolyzed Lactoferrin C-lobe at 2.28 angstrom Resolution.
Protein J., 40, 2021
3QV4
DownloadVisualize
BU of 3qv4 by Molmil
Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with dipeptide L-ALA D-GLU at 2.7 A resolution
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ALANINE, ...
Authors:Shukla, P.K, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-02-25
Release date:2011-03-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with dipeptide L-ALA D-GLU at 2.7 A resolution
To be Published
3TRU
DownloadVisualize
BU of 3tru by Molmil
Crystal structure of the complex of peptidoglycan recognition protein with cellular metabolite chorismate at 3.2 A resolution
Descriptor: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-09-10
Release date:2011-09-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein with cellular metabolite chorismate at 3.2 A resolution
To be Published
5ZZV
DownloadVisualize
BU of 5zzv by Molmil
Crystal structure of PEG-1500 crystallized Peptidyl-tRNA Hydrolase from Acinetobacter baumannii at 1.5 A resolution
Descriptor: 1,2-ETHANEDIOL, Peptidyl-tRNA hydrolase
Authors:Bairagya, H.R, Sharma, P, Iqbal, N, Sharma, S, Singh, T.P.
Deposit date:2018-06-04
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Crystal structure of PEG-1500 crystallized Peptidyl-tRNA Hydrolase from Acinetobacter baumannii at 1.5 A resolution
To Be Published
4ORV
DownloadVisualize
BU of 4orv by Molmil
Crystal structure of the ternary complex of camel peptidoglycan recognition protein PGRP-S with 7- phenylheptanoic acid and N- acetylglucosamine at 2.50 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7-phenylheptanoic acid, GLYCEROL, ...
Authors:Yamini, S, Sharma, P, Yadav, S.P, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-02-12
Release date:2014-03-05
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the ternary complex of camel peptidoglycan recognition protein PGRP-S with 7- phenylheptanoic acid and N- acetylglucosamine at 2.50 A resolution
To be Published
4OUG
DownloadVisualize
BU of 4oug by Molmil
Crystal structure of the ternary complex of camel peptidoglycan recognition protein, PGRP-S with lipopolysaccharide and palmitic acid at 2.46 A resolution
Descriptor: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Yamini, S, Sharma, P, Yadav, S.P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-02-17
Release date:2014-03-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Crystal structure of the ternary complex of camel peptidoglycan recognition protein, PGRP-S with lipopolysaccharide and palmitic acid at 2.46 A resolution
To be Published
3UIL
DownloadVisualize
BU of 3uil by Molmil
Crystal Structure of the complex of PGRP-S with lauric acid at 2.2 A resolution
Descriptor: GLYCEROL, LAURIC ACID, Peptidoglycan recognition protein 1
Authors:Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2011-11-05
Release date:2012-07-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site
Arch.Biochem.Biophys., 529, 2013

231029

PDB entries from 2025-02-05

PDB statisticsPDBj update infoContact PDBjnumon