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PDB: 107 件

7V4E
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), SULFATE ION, VpsR
著者Chakrabortty, T, Sen, U.
登録日2021-08-12
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
7V3W
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, VpsR
著者Chakrabortty, T, Sen, U, Chowdhury, S.R.
登録日2021-08-11
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.205 Å)
主引用文献Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
7V2V
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
分子名称: SULFATE ION, VpsR
著者Chakrabortty, T, Sen, U, Chowdhury, S.R.
登録日2021-08-10
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.194 Å)
主引用文献Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
7V2B
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BU of 7v2b by Molmil
Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
分子名称: GUANOSINE-5'-TRIPHOSPHATE, VpsR
著者Chakrabortty, T, Sen, U.
登録日2021-08-08
公開日2022-04-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
3RX6
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BU of 3rx6 by Molmil
Crystal structure of Polarity Suppression protein from Enterobacteria phage P4
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, IODIDE ION, MERCURY (II) ION, ...
著者Banerjee, R, Nath, S, Khamrui, S, Sen, R, Sen, U.
登録日2011-05-10
公開日2012-07-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.039 Å)
主引用文献The first structure of polarity suppression protein, Psu from enterobacteria phage P4, reveals a novel fold and a knotted dimer
J.Biol.Chem., 287, 2012
4X8F
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BU of 4x8f by Molmil
Vibrio cholerae O395 Ribokinase in apo form
分子名称: Ribokinase
著者Paul, R, Patra, M.D, Sen, U.
登録日2014-12-10
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal Structure of Apo and Ligand Bound Vibrio choleraeRibokinase (Vc-RK): Role of Monovalent Cation Induced Activation and Structural Flexibility in Sugar Phosphorylation
Adv Exp Med Biol., 842, 2015
4LRQ
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BU of 4lrq by Molmil
Crystal structure of a Low Molecular Weight Phosphotyrosine phosphatase from Vibrio choleraeO395
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Phosphotyrosine protein phosphatase, SULFATE ION
著者Nath, S, Banerjee, R, Sen, U.
登録日2013-07-20
公開日2014-07-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Atomic resolution crystal structure of VcLMWPTP-1 from Vibrio cholerae O395: insights into a novel mode of dimerization in the low molecular weight protein tyrosine phosphatase family.
Biochem.Biophys.Res.Commun., 450, 2014
4JP1
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Mg2+ bound structure of Vibrio Cholerae CheY3
分子名称: Chemotaxis protein CheY, MAGNESIUM ION
著者Biswas, M, Dasgupta, J, Sen, U.
登録日2013-03-19
公開日2014-04-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Conformational barrier of CheY3 and inability of CheY4 to bind FliM control the flagellar motor action in Vibrio cholerae
Plos One, 8, 2013
6IH7
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Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - 3',3'-cGAMP bound form
分子名称: 2-amino-9-[(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-9-(6-amino-9H-purin-9-yl)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecin-2-yl]-1,9-dihydro-6H-purin-6-one, CALCIUM ION, cyclic di nucleotide phoshodiesterase
著者Yadav, M, Pal, K, Sen, U.
登録日2018-09-28
公開日2019-10-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication.
Biochem.J., 476, 2019
4DVD
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BU of 4dvd by Molmil
Crystal structure of the disulphide linked knotted homodimer of Psu
分子名称: Polarity suppression protein
著者Banerjee, R, Nath, S, Sen, U.
登録日2012-02-23
公開日2012-11-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The first structure of polarity suppression protein, Psu from enterobacteria phage P4, reveals a novel fold and a knotted dimer
J.Biol.Chem., 287, 2012
5Z3M
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BU of 5z3m by Molmil
Crystal structure of Low Molecular Weight Phosphotyrosine phosphatase (VcLMWPTP-2) from Vibrio choleraeO395
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, GLYCEROL, Phosphotyrosine protein phosphatase, ...
著者Chatterjee, S, Nath, S, Sen, U.
登録日2018-01-08
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Vibrio cholerae LMWPTP-2 display unique surface charge and grooves around the active site: Indicative of distinctive substrate specificity and scope to design specific inhibitor.
Biochim Biophys Acta Proteins Proteom, 1867, 2019
5Z81
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Trimeric structure of Vibrio cholerae Heat Shock Protein 15 at 2.3 Angstrom resolution
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Heat shock protein 15, SULFATE ION
著者Roy Chowdhury, S, Sen, U.
登録日2018-01-30
公開日2018-03-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.334 Å)
主引用文献Trimeric structure of Vibrio cholerae Heat Shock Protein 15 at 2.3 Angstrom resolution
To Be Published
4H60
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BU of 4h60 by Molmil
High resolution structure of Vibrio cholerae chemotaxis protein CheY4 crystallized in low pH (4.0) condition
分子名称: CALCIUM ION, Chemotaxis protein CheY, SULFATE ION
著者Biswas, M, Dasgupta, J, Sen, U.
登録日2012-09-19
公開日2013-08-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Conformational Barrier of CheY3 and Inability of CheY4 to Bind FliM Control the Flagellar Motor Action in Vibrio cholerae.
Plos One, 8, 2013
5EY7
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BU of 5ey7 by Molmil
Crystal structure of Fructokinase from Vibrio cholerae O395 in apo form
分子名称: Fructokinase, SODIUM ION
著者Paul, R, Nath, S, Sen, U.
登録日2015-11-24
公開日2016-11-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.461 Å)
主引用文献Crystal structure of Fructokinase from Vibrio cholerae O395 in apo form
To Be Published
5F11
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BU of 5f11 by Molmil
Crystal structure of Fructokinase from Vibrio cholerae O395 in fructose bound form
分子名称: Fructokinase, SODIUM ION, beta-D-fructofuranose
著者Paul, R, Nath, S, Sen, U.
登録日2015-11-28
公開日2016-11-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Fructokinase from Vibrio cholerae O395 in apo form
To Be Published
5EYN
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BU of 5eyn by Molmil
Crystal structure of Fructokinase from Vibrio cholerae O395 in fructose, ADP, Beryllium trifluoride and calcium ion bound form
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, ...
著者Paul, R, Nath, S, Sen, U.
登録日2015-11-25
公開日2016-11-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.289 Å)
主引用文献Crystal structure of Fructokinase from Vibrio cholerae O395 in apo form
To Be Published
5F0Z
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BU of 5f0z by Molmil
Crystal structure of Fructokinase from Vibrio cholerae O395 in fructose, ADP and calcium ion bound form
分子名称: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Fructokinase, ...
著者Paul, R, Nath, S, Sen, U.
登録日2015-11-28
公開日2016-11-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of Fructokinase from Vibrio cholerae O395 in apo form
To Be Published
4HA2
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BU of 4ha2 by Molmil
Crystal structure ofa phenyl alanine 91 mutant of WCI
分子名称: Chymotrypsin inhibitor 3, NICKEL (II) ION
著者Majumder, S, Sen, U.
登録日2012-09-25
公開日2014-07-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A conserved tryptophan (W91) at the barrel-lid junction modulates the packing and stability of Kunitz (STI) family of inhibitors.
Biochim.Biophys.Acta, 1854, 2015
4HI2
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BU of 4hi2 by Molmil
Crystal structure of an Acylphosphatase protein cage
分子名称: Acylphosphatase, SULFATE ION
著者Nath, S, Banerjee, R, Sen, U.
登録日2012-10-11
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of acylphosphatase C20R mutant from Vibrio cholerae0395
J.Mol.Biol., 2013
4HNS
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BU of 4hns by Molmil
Crystal structure of activated CheY3 of Vibrio cholerae
分子名称: BERYLLIUM TRIFLUORIDE ION, Chemotaxis protein CheY, MAGNESIUM ION
著者Biswas, M, Sen, U, Dasgupta, J.
登録日2012-10-21
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Conformational Barrier of CheY3 and Inability of CheY4 to Bind FliM Control the Flagellar Motor Action in Vibrio cholerae.
Plos One, 8, 2013
4HI1
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BU of 4hi1 by Molmil
Crystal structure of acylphosphatase C20R mutant from Vibrio cholerae0395
分子名称: Acylphosphatase, MOLYBDATE ION, SULFATE ION
著者Nath, S, Banerjee, R, Sen, U.
登録日2012-10-11
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.964 Å)
主引用文献Crystal structure of acylphosphatase C20R mutant from Vibrio cholerae0395
J.Mol.Biol., 2013
4H9W
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BU of 4h9w by Molmil
crystal structure of a METHIONINE mutant of WCI
分子名称: Chymotrypsin inhibitor 3
著者Majumder, S, Sen, U.
登録日2012-09-25
公開日2014-04-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A conserved tryptophan (W91) at the barrel-lid junction modulates the packing and stability of Kunitz (STI) family of inhibitors.
Biochim.Biophys.Acta, 1854, 2015
4HNQ
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BU of 4hnq by Molmil
Crystal Structure of the mutant Q97A of Vibrio cholerae CheY3
分子名称: Chemotaxis protein CheY, MAGNESIUM ION
著者Biswas, M, Sen, U, Dasgupta, J.
登録日2012-10-21
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Conformational Barrier of CheY3 and Inability of CheY4 to Bind FliM Control the Flagellar Motor Action in Vibrio cholerae.
Plos One, 8, 2013
4I2N
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BU of 4i2n by Molmil
Crystal structure of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Intracellular protease/amidase
著者Das, S, Sen, U.
登録日2012-11-22
公開日2013-11-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Temperature dependent structural flexibility and functional activation of 31kD Heat Shock Protein, VcHsp31 from Vibrio cholerae
To be Published
4HNR
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BU of 4hnr by Molmil
High resolution structure of Chemotaxis response regulator CheY4 of Vibrio cholerae
分子名称: Chemotaxis protein CheY, SULFATE ION
著者Biswas, M, Sen, U, Dasgupta, J.
登録日2012-10-21
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Conformational Barrier of CheY3 and Inability of CheY4 to Bind FliM Control the Flagellar Motor Action in Vibrio cholerae.
Plos One, 8, 2013

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