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PDB: 278 results

8DUT
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Duplex-G-quadruplex-duplex (DGD) class_1
Descriptor: Duplex-G-quadruplex-duplex (46-MER)
Authors:Monsen, R.C, Chua, E.Y.D, Hopkins, J.B, Chaires, J.B, Trent, J.O.
Deposit date:2022-07-27
Release date:2023-02-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structure of a 28.5 kDa duplex-embedded G-quadruplex system resolved to 7.4 angstrom resolution with cryo-EM.
Nucleic Acids Res., 51, 2023
5JWR
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BU of 5jwr by Molmil
Crystal structure of foldswitch-stabilized KaiB in complex with the N-terminal CI domain of KaiC and a dimer of KaiA C-terminal domains from Thermosynechococcus elongatus
Descriptor: Circadian clock protein KaiA, Circadian clock protein KaiB, Circadian clock protein kinase KaiC, ...
Authors:Tseng, R, Goularte, N.F, Chavan, A, Luu, J, Chang, Y.G, Heilser, J, Tripathi, S, LiWang, A, Partch, C.L.
Deposit date:2016-05-12
Release date:2017-03-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural basis of the day-night transition in a bacterial circadian clock.
Science, 355, 2017
5JYU
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NMR structure of pseudo receiver domain of CikA from Thermosynechococcus elongatus
Descriptor: Two-component sensor histidine kinase
Authors:Tseng, R.D, LiWang, A.L.
Deposit date:2016-05-15
Release date:2017-03-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of the day-night transition in a bacterial circadian clock.
Science, 355, 2017
5JWQ
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BU of 5jwq by Molmil
Crystal structure of KaiC S431E in complex with foldswitch-stabilized KaiB from Thermosynechococcus elongatus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiB, Circadian clock protein kinase KaiC
Authors:Tseng, R, Goularte, N.F, Chavan, A, Luu, J, Chang, Y, Heilser, J, Tripathi, S, LiWang, A, Partch, C.L.
Deposit date:2016-05-12
Release date:2017-03-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.871 Å)
Cite:Structural basis of the day-night transition in a bacterial circadian clock.
Science, 355, 2017
5JWO
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BU of 5jwo by Molmil
Crystal structure of foldswitch-stabilized KaiB in complex with the N-terminal CI domain of KaiC from Thermosynechococcus elongatus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiB, Circadian clock protein kinase KaiC
Authors:Tseng, R, Goularte, N.F, Chavan, A, Luu, J, Chang, Y, Heilser, J, Tripathi, S, LiWang, A, Partch, C.L.
Deposit date:2016-05-12
Release date:2017-03-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of the day-night transition in a bacterial circadian clock.
Science, 355, 2017
3KI0
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BU of 3ki0 by Molmil
Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-D
Descriptor: 3-(morpholin-4-ylmethyl)-1,5-dihydro-6H-[1,2]diazepino[4,5,6-cd]indol-6-one, CHLORIDE ION, Cholix toxin
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
3KI7
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BU of 3ki7 by Molmil
Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-I
Descriptor: 2-{2-[4-(pyrrolidin-1-ylmethyl)phenyl]ethyl}-5,6-dihydroimidazo[4,5,1-jk][1,4]benzodiazepin-7(4H)-one, Cholix toxin
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
3KI2
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Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-G
Descriptor: 2-(4-methylpiperazin-1-yl)benzo[c][1,5]naphthyridin-6(5H)-one, Cholix toxin
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
6B0Y
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BU of 6b0y by Molmil
Crystal Structure of small molecule ARS-917 covalently bound to K-Ras G12C
Descriptor: 1-{4-[6-chloro-7-(2-fluorophenyl)quinazolin-4-yl]piperazin-1-yl}propan-1-one, CALCIUM ION, GLYCEROL, ...
Authors:Hansen, R, Peters, U, Babbar, A, Chen, Y, Feng, J, Janes, M.R, Li, L.-S, Ren, P, Liu, Y, Zarrinkar, P.P.
Deposit date:2017-09-15
Release date:2018-05-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:The reactivity-driven biochemical mechanism of covalent KRASG12Cinhibitors.
Nat. Struct. Mol. Biol., 25, 2018
3KI4
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BU of 3ki4 by Molmil
Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-P
Descriptor: (11bR)-3-oxo-1,2,3,11b-tetrahydrochromeno[4,3,2-de]isoquinoline-10-sulfonic acid, Cholix toxin, GLYCEROL
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
3KI3
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BU of 3ki3 by Molmil
Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-H
Descriptor: 2-[(dimethylamino)methyl]-5,6-dihydroimidazo[4,5,1-jk][1,4]benzodiazepin-7(4H)-one, Cholix toxin
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
3KI6
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BU of 3ki6 by Molmil
Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-L
Descriptor: 8-fluoro-2-(3-piperidin-1-ylpropanoyl)-1,3,4,5-tetrahydrobenzo[c][1,6]naphthyridin-6(2H)-one, Cholix toxin
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
3KI5
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BU of 3ki5 by Molmil
Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-M
Descriptor: Cholix toxin, N-(6-oxo-5,6-dihydrobenzo[c][1,5]naphthyridin-2-yl)-2-(4-pyrrolidin-1-ylpiperidin-1-yl)acetamide
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
1A9E
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BU of 1a9e by Molmil
DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS
Descriptor: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN), ...
Authors:Menssen, R, Orth, P, Ziegler, A, Saenger, W.
Deposit date:1998-04-05
Release date:1998-10-21
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Decamer-like conformation of a nona-peptide bound to HLA-B*3501 due to non-standard positioning of the C terminus.
J.Mol.Biol., 285, 1999
1A9B
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BU of 1a9b by Molmil
DECAMER-LIKE CONFORMATION OF A NANO-PEPTIDE BOUND TO HLA-B3501 DUE TO NONSTANDARD POSITIONING OF THE C-TERMINUS
Descriptor: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, B-35 B*3501 (ALPHA CHAIN), ...
Authors:Menssen, R, Orth, P, Ziegler, A, Saenger, W.
Deposit date:1998-04-03
Release date:1998-10-21
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Decamer-like conformation of a nona-peptide bound to HLA-B*3501 due to non-standard positioning of the C terminus.
J.Mol.Biol., 285, 1999
3KI1
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BU of 3ki1 by Molmil
Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-F
Descriptor: 2-{4-[3-(dimethylamino)propoxy]phenyl}-5,6-dihydroimidazo[4,5,1-jk][1,4]benzodiazepin-7(4H)-one, Cholix toxin
Authors:Jorgensen, R, Edwards, P.R, Merrill, A.R.
Deposit date:2009-10-31
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae
To be Published
3LE4
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BU of 3le4 by Molmil
Crystal structure of the DGCR8 dimerization domain
Descriptor: Microprocessor complex subunit DGCR8
Authors:Senturia, R, Cascio, D, Sawaya, M, Guo, F.
Deposit date:2010-01-14
Release date:2010-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Structure of the dimerization domain of DiGeorge Critical Region 8
Protein Sci., 19, 2010
3NQS
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BU of 3nqs by Molmil
Crystal Structure of Inducible Nitric Oxide Synthase with N-Nitrosated-pterin
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, ETHYL 4-[(4-METHYLPYRIDIN-2-YL)AMINO]PIPERIDINE-1-CARBOXYLATE, ...
Authors:Rosenfeld, R.J, Getzoff, E.D, Tainer, J.A.
Deposit date:2010-06-29
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nitric-oxide synthase forms N-NO-pterin and S-NO-cys: implications for activity, allostery, and regulation.
J.Biol.Chem., 285, 2010
7JNE
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BU of 7jne by Molmil
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RGSQLRIASR
Descriptor: Alkaline phosphatase peptide, Chaperone protein DnaK, SULFATE ION
Authors:Jansen, R.M, Ozden, C, Gierasch, L.M, Garman, S.C.
Deposit date:2020-08-04
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Selective promiscuity in the binding of E. coli Hsp70 to an unfolded protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
7JN9
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BU of 7jn9 by Molmil
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide QEHTGSQLRIAAYGP
Descriptor: Alkaline phosphatase peptide, Chaperone protein DnaK, SULFATE ION
Authors:Jansen, R.M, Ozden, C, Gierasch, L.M, Garman, S.C.
Deposit date:2020-08-04
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Selective promiscuity in the binding of E. coli Hsp70 to an unfolded protein.
Proc.Natl.Acad.Sci.USA, 118, 2021
1U2R
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BU of 1u2r by Molmil
Crystal Structure of ADP-ribosylated Ribosomal Translocase from Saccharomyces cerevisiae
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Jorgensen, R, Yates, S.P, Nilsson, J, Prentice, G.A, Teal, D.J, Merrill, A.R, Andersen, G.R.
Deposit date:2004-07-20
Release date:2004-09-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of ADP-ribosylated Ribosomal Translocase from Saccharomyces cerevisiae
J.Biol.Chem., 279, 2004
1ZM3
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BU of 1zm3 by Molmil
Structure of the apo eEF2-ETA complex
Descriptor: Elongation factor 2, exotoxin A
Authors:Joergensen, R, Merrill, A.R, Yates, S.P, Marquez, V.E, Schwan, A.L, Boesen, T, Andersen, G.R.
Deposit date:2005-05-10
Release date:2005-05-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Exotoxin A-eEF2 complex structure indicates ADP ribosylation by ribosome mimicry.
Nature, 436, 2005
1ZM2
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BU of 1zm2 by Molmil
Structure of ADP-ribosylated eEF2 in complex with catalytic fragment of ETA
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Elongation factor 2, Exotoxin A
Authors:Joergensen, R, Merrill, A.R, Yates, S.P, Marquez, V.E, Schwan, A.L, Boesen, T, Andersen, G.R.
Deposit date:2005-05-10
Release date:2005-05-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Exotoxin A-eEF2 complex structure indicates ADP ribosylation by ribosome mimicry.
Nature, 436, 2005
1ZM9
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Structure of eEF2-ETA in complex with PJ34
Descriptor: Elongation factor 2, N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE, exotoxin A
Authors:Joergensen, R, Merrill, A.R, Yates, S.P, Marquez, V.E, Schwan, A.L, Boesen, T, Andersen, G.R.
Deposit date:2005-05-10
Release date:2005-05-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Exotoxin A-eEF2 complex structure indicates ADP ribosylation by ribosome mimicry.
Nature, 436, 2005
1ZM4
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BU of 1zm4 by Molmil
Structure of the eEF2-ETA-bTAD complex
Descriptor: BETA-METHYLENE-THIAZOLE-4-CARBOXYAMIDE-ADENINE DINUCLEOTIDE, Elongation factor 2, exotoxin A
Authors:Joergensen, R, Merrill, A.R, Yates, S.P, Marquez, V.E, Schwan, A.L, Boesen, T, Andersen, G.R.
Deposit date:2005-05-10
Release date:2005-05-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Exotoxin A-eEF2 complex structure indicates ADP ribosylation by ribosome mimicry.
Nature, 436, 2005

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