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PDB: 277 results

5EP9
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BU of 5ep9 by Molmil
Crystal structure of the non-heme alpha ketoglutarate dependent epimerase SnoN from nogalamycin biosynthesis
Descriptor: 2-OXOGLUTARIC ACID, ACETATE ION, FE (III) ION, ...
Authors:Selvaraj, B, Lindqvist, Y, Niiranen, L, Siitonen, V, Metsa-Ketela, M, Schneider, G.
Deposit date:2015-11-11
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Divergent non-heme iron enzymes in the nogalamycin biosynthetic pathway.
Proc.Natl.Acad.Sci.USA, 113, 2016
4JB1
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BU of 4jb1 by Molmil
Crystal structure of P. aeruginosa MurB in complex with NADP+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Chen, M.W, Lohkamp, B, Schnell, R, Lescar, J, Schneider, G.
Deposit date:2013-02-19
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate Channel Flexibility in Pseudomonas aeruginosa MurB Accommodates Two Distinct Substrates.
Plos One, 8, 2013
4JXB
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BU of 4jxb by Molmil
RipD (Rv1566c) from Mycobacterium tuberculosis: a non-catalytic NlpC/p60 domain protein, adaptation to peptidoglycan-binding function
Descriptor: ACETATE ION, Invasion-associated protein
Authors:Both, D, Steiner, E.M, Schnell, R, Schneider, G.
Deposit date:2013-03-28
Release date:2013-10-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:RipD (Rv1566c) from Mycobacterium tuberculosis: adaptation of an NlpC/p60 domain to a non-catalytic peptidoglycan-binding function.
Biochem.J., 457, 2014
4JAY
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BU of 4jay by Molmil
Crystal structure of P. aeruginosa MurB in complex with NADP+
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Chen, M.W, Lohkamp, B, Schnell, R, Lescar, J, Schneider, G.
Deposit date:2013-02-19
Release date:2013-07-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Substrate Channel Flexibility in Pseudomonas aeruginosa MurB Accommodates Two Distinct Substrates.
Plos One, 8, 2013
2IPI
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BU of 2ipi by Molmil
Crystal Structure of Aclacinomycin Oxidoreductase
Descriptor: Aclacinomycin oxidoreductase (AknOx), FLAVIN-ADENINE DINUCLEOTIDE, METHYL (2S,4R)-2-ETHYL-2,5,7-TRIHYDROXY-6,11-DIOXO-4-{[2,3,6-TRIDEOXY-4-O-{2,6-DIDEOXY-4-O-[(2S,6S)-6-METHYL-5-OXOTETRAHYDRO-2H-PYRAN-2-YL]-ALPHA-D-LYXO-HEXOPYRANOSYL}-3-(DIMETHYLAMINO)-D-RIBO-HEXOPYRANOSYL]OXY}-1,2,3,4,6,11-HEXAHYDROTETRACENE-1-CARBOXYLATE
Authors:Sultana, A, Kursula, I, Schneider, G, Alexeev, I, Niemi, J, Mantsala, P.
Deposit date:2006-10-12
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure determination by multiwavelength anomalous diffraction of aclacinomycin oxidoreductase: indications of multidomain pseudomerohedral twinning.
Acta Crystallogr.,Sect.D, 63, 2007
3IHG
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BU of 3ihg by Molmil
Crystal structure of a ternary complex of aklavinone-11 hydroxylase with FAD and aklavinone
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, RdmE, SULFATE ION, ...
Authors:Lindqvist, Y, Koskiniemi, H, Jansson, A, Sandalova, T, Schneider, G.
Deposit date:2009-07-30
Release date:2009-09-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis for substrate recognition and specificity in aklavinone-11-hydroxylase from rhodomycin biosynthesis.
J.Mol.Biol., 393, 2009
2V3W
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BU of 2v3w by Molmil
Crystal structure of the benzoylformate decarboxylase variant L461A from Pseudomonas putida
Descriptor: BENZOYLFORMATE DECARBOXYLASE, MAGNESIUM ION, SULFATE ION, ...
Authors:Gocke, D, Walter, L, Gauchenova, K, Kolter, G, Knoll, M, Berthold, C.L, Schneider, G, Pleiss, J, Mueller, M, Pohl, M.
Deposit date:2007-06-25
Release date:2008-01-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Rational Protein Design of Thdp-Dependent Enzymes-Engineering Stereoselectivity.
Chembiochem, 9, 2008
2WHP
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BU of 2whp by Molmil
Crystal structure of acetylcholinesterase, phosphonylated by sarin and in complex with HI-6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(AMINOCARBONYL)-1-[({2-[(E)-(HYDROXYIMINO)METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYRIDINIUM, ACETYLCHOLINESTERASE, ...
Authors:Ekstrom, F, Hornberg, A, Artursson, E, Hammarstrom, L.G, Schneider, G, Pang, Y.P.
Deposit date:2009-05-06
Release date:2009-06-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Hi-6Sarin-Acetylcholinesterase Determined by X-Ray Crystallography and Molecular Dynamics Simulation: Reactivator Mechanism and Design.
Plos One, 4, 2009
2WHQ
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BU of 2whq by Molmil
Crystal structure of acetylcholinesterase, phosphonylated by sarin (aged) in complex with HI-6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(AMINOCARBONYL)-1-[({2-[(E)-(HYDROXYIMINO)METHYL]PYRIDINIUM-1-YL}METHOXY)METHYL]PYRIDINIUM, ACETYLCHOLINESTERASE, ...
Authors:Ekstrom, F, Hornberg, A, Artursson, E, Hammarstrom, L.G, Schneider, G, Pang, Y.P.
Deposit date:2009-05-06
Release date:2009-06-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of Hi-6Sarin-Acetylcholinesterase Determined by X-Ray Crystallography and Molecular Dynamics Simulation: Reactivator Mechanism and Design.
Plos One, 4, 2009
2WHR
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BU of 2whr by Molmil
Crystal structure of acetylcholinesterase in complex with K027
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ...
Authors:Ekstrom, F, Hornberg, A, Artursson, E, Hammarstrom, L.-G, Schneider, G, Pang, Y.-P.
Deposit date:2009-05-06
Release date:2009-05-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.545 Å)
Cite:Structure of Hi-6Sarin-Acetylcholinesterase Determined by X-Ray Crystallography and Molecular Dynamics Simulation: Reactivator Mechanism and Design.
Plos One, 4, 2009
3R5E
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BU of 3r5e by Molmil
TRANSALDOLASE from Corynebacterium glutamicum
Descriptor: SULFATE ION, Transaldolase
Authors:Sandalova, T, Samland, A.K, Schneider, G.
Deposit date:2011-03-18
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conservation of structure and mechanism within the transaldolase enzyme family.
Febs J., 279, 2012
3R5D
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BU of 3r5d by Molmil
Pseudomonas aeruginosa DapD (PA3666) apoprotein
Descriptor: GLYCEROL, Tetrahydrodipicolinate N-succinyletransferase
Authors:Sandalova, T, Schnell, R, Schneider, G.
Deposit date:2011-03-18
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion.
Plos One, 7, 2012
3QZE
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BU of 3qze by Molmil
Crystal Structure of DapA (PA1010) at 1.6 A resolution
Descriptor: CHLORIDE ION, Dihydrodipicolinate synthase
Authors:Schnell, R, Sandalova, T, Schneider, G.
Deposit date:2011-03-05
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion.
Plos One, 7, 2012
1GT8
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BU of 1gt8 by Molmil
DIHYDROPYRIMIDINE DEHYDROGENASE (DPD) FROM PIG, TERNARY COMPLEX WITH NADPH AND URACIL-4-ACETIC ACID
Descriptor: DIHYDROPYRIMIDINE DEHYDROGENASE, FLAVIN MONONUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Dobritzsch, D, Ricagno, S, Schneider, G, Schnackerz, K.D, Lindqvist, Y.
Deposit date:2002-01-14
Release date:2002-04-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of the productive ternary complex of dihydropyrimidine dehydrogenase with NADPH and 5-iodouracil. Implications for mechanism of inhibition and electron transfer.
J. Biol. Chem., 277, 2002
1GTH
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BU of 1gth by Molmil
DIHYDROPYRIMIDINE DEHYDROGENASE (DPD) FROM PIG, TERNARY COMPLEX WITH NADPH AND 5-IODOURACIL
Descriptor: (5S)-5-IODODIHYDRO-2,4(1H,3H)-PYRIMIDINEDIONE, 5-IODOURACIL, DIHYDROPYRIMIDINE DEHYDROGENASE, ...
Authors:Dobritzsch, D, Ricagno, S, Schneider, G, Schnackerz, K.D, Lindqvist, Y.
Deposit date:2002-01-15
Release date:2002-04-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the productive ternary complex of dihydropyrimidine dehydrogenase with NADPH and 5-iodouracil. Implications for mechanism of inhibition and electron transfer.
J. Biol. Chem., 277, 2002
1GTE
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BU of 1gte by Molmil
DIHYDROPYRIMIDINE DEHYDROGENASE (DPD) FROM PIG, BINARY COMPLEX WITH 5-IODOURACIL
Descriptor: 5-IODOURACIL, DIHYDROPYRIMIDINE DEHYDROGENASE, FLAVIN MONONUCLEOTIDE, ...
Authors:Dobritzsch, D, Ricagno, S, Schneider, G, Schnackerz, K.D, Lindqvist, Y.
Deposit date:2002-01-15
Release date:2002-04-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the productive ternary complex of dihydropyrimidine dehydrogenase with NADPH and 5-iodouracil. Implications for mechanism of inhibition and electron transfer.
J. Biol. Chem., 277, 2002
1UCW
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BU of 1ucw by Molmil
COMPLEX OF TRANSALDOLASE WITH THE REDUCED SCHIFF-BASE INTERMEDIATE
Descriptor: TRANSALDOLASE
Authors:Jia, J, Lindqvist, Y, Schneider, G.
Deposit date:1996-11-14
Release date:1997-07-07
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the reduced Schiff-base intermediate complex of transaldolase B from Escherichia coli: mechanistic implications for class I aldolases.
Protein Sci., 6, 1997
2GEY
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BU of 2gey by Molmil
Crystal Structure of AclR a putative hydroxylase from Streptomyces galilaeus
Descriptor: AclR protein, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Beinker, P, Lohkamp, B, Schneider, G.
Deposit date:2006-03-21
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of SnoaL2 and AclR: two putative hydroxylases in the biosynthesis of aromatic polyketide antibiotics
J.Mol.Biol., 359, 2006
1CK7
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BU of 1ck7 by Molmil
GELATINASE A (FULL-LENGTH)
Descriptor: CALCIUM ION, CHLORIDE ION, PROTEIN (GELATINASE A), ...
Authors:Morgunova, E, Tuuttila, A, Bergmann, U, Isupov, M, Lindqvist, Y, Schneider, G, Tryggvason, K.
Deposit date:1999-04-28
Release date:1999-08-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of human pro-matrix metalloproteinase-2: activation mechanism revealed.
Science, 284, 1999
3R5A
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BU of 3r5a by Molmil
Pseudomonas aeruginosa DapD (PA3666) in complex with D-2-aminopimelate
Descriptor: (2R)-2-aminoheptanedioic acid, GLYCEROL, Tetrahydrodipicolinate N-succinyletransferase
Authors:Sandalova, T, Schnell, R, Schneider, G.
Deposit date:2011-03-18
Release date:2012-01-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion.
Plos One, 7, 2012
3R5C
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BU of 3r5c by Molmil
Pseudomonas aeruginosa DapD (PA3666) in complex with CoA and succinate
Descriptor: COENZYME A, SUCCINIC ACID, Tetrahydrodipicolinate N-succinyletransferase
Authors:Sandalova, T, Schnell, R, Schneider, G.
Deposit date:2011-03-18
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion.
Plos One, 7, 2012
3PBC
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BU of 3pbc by Molmil
Peptidase module of the peptidoglycan hydrolase RipA (Rv1477) from Mycobacterium tuberculosis at 1.38 resolution
Descriptor: INVASION PROTEIN
Authors:Schnell, R, Both, D, Schneider, G.
Deposit date:2010-10-20
Release date:2011-08-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Peptidoglycan Remodeling in Mycobacterium tuberculosis: Comparison of Structures and Catalytic Activities of RipA and RipB.
J.Mol.Biol., 413, 2011
3PBI
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BU of 3pbi by Molmil
Structure of the peptidoglycan hydrolase RipB (Rv1478) from Mycobacterium tuberculosis at 1.6 resolution
Descriptor: INVASION PROTEIN
Authors:Schnell, R, Both, D, Schneider, G.
Deposit date:2010-10-20
Release date:2011-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Peptidoglycan Remodeling in Mycobacterium tuberculosis: Comparison of Structures and Catalytic Activities of RipA and RipB.
J.Mol.Biol., 413, 2011
3R5B
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BU of 3r5b by Molmil
Pseudomonas aeruginosa DapD (PA3666) in complex with L-2-aminopimelate
Descriptor: (2S)-2-aminoheptanedioic acid, Tetrahydrodipicolinate N-succinyletransferase
Authors:Sandalova, T, Schnell, R, Schneider, G.
Deposit date:2011-03-18
Release date:2012-01-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Tetrahydrodipicolinate N-succinyltransferase and dihydrodipicolinate synthase from Pseudomonas aeruginosa: structure analysis and gene deletion.
Plos One, 7, 2012
4HU2
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BU of 4hu2 by Molmil
Crystal structure of LdtMt2, a L,D-transpeptidase from Mycobacterium tuberculosis: domain A and B
Descriptor: PROBABLE CONSERVED LIPOPROTEIN LPPS, SULFATE ION
Authors:Both, D, Steiner, E, Lindqvist, Y, Schnell, R, Schneider, G.
Deposit date:2012-11-02
Release date:2012-12-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structure of LdtMt2, an L,D-transpeptidase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 69, 2013

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