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PDB: 36 件

3W9H
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Structural basis for the inhibition of bacterial multidrug exporters
分子名称: Acriflavine resistance protein B, [{2-[({[(3R)-1-{8-[(4-tert-butyl-1,3-thiazol-2-yl)carbamoyl]-4-oxo-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-4H-pyrido[1,2-a]pyrimidin-2-yl}piperidin-3-yl]oxy}carbonyl)amino]ethyl}(dimethyl)ammonio]acetate
著者Sakurai, K, Nagata, C, Nakashima, R, Yamaguchi, A.
登録日2013-04-04
公開日2013-07-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structural basis for the inhibition of bacterial multidrug exporters
Nature, 500, 2013
2ZUH
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BU of 2zuh by Molmil
Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant (D297A)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
著者Sakurai, K, Harada, K, Shimada, H, Shimokata, K, Hayashi, T, Tsukihara, T.
登録日2008-10-18
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant
to be published
2ZUI
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Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant (D297N)
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Sakurai, K, Harada, K, Shimada, H, Shimokata, K, Hayashi, T, Tsukihara, T.
登録日2008-10-18
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant
TO BE PUBLISHED
2ZUJ
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Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant(D297L)
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Sakurai, K, Harada, K, Shimada, H, Shimokata, K, Hayashi, T, Tsukihara, T.
登録日2008-10-18
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant
to be published
3W9I
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Structural basis for the inhibition of bacterial multidrug exporters
分子名称: DODECYL-BETA-D-MALTOSIDE, Multidrug resistance protein MexB
著者Sakurai, K, Nakashima, R, Hayashi, K, Yamaguchi, A.
登録日2013-04-04
公開日2013-07-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structural basis for the inhibition of bacterial multidrug exporters
Nature, 500, 2013
3W9J
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Structural basis for the inhibition of bacterial multidrug exporters
分子名称: DODECYL-BETA-D-MALTOSIDE, Multidrug resistance protein MexB, [{2-[({[(3R)-1-{8-[(4-tert-butyl-1,3-thiazol-2-yl)carbamoyl]-4-oxo-3-[(E)-2-(1H-tetrazol-5-yl)ethenyl]-4H-pyrido[1,2-a]pyrimidin-2-yl}piperidin-3-yl]oxy}carbonyl)amino]ethyl}(dimethyl)ammonio]acetate
著者Sakurai, K, Nakashima, R, Hayashi, K, Yamaguchi, A.
登録日2013-04-04
公開日2013-07-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural basis for the inhibition of bacterial multidrug exporters
Nature, 500, 2013
2ZAX
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Crystal Structure of Ferric Cytochrome P450cam
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Cytochrome P450-cam, ...
著者Sakurai, K, Shimada, H, Harada, K, Hayashi, T, Tsukihara, T.
登録日2007-10-11
公開日2008-01-01
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Evaluation of the functional role of the heme-6-propionate side chain in cytochrome P450cam
J.Am.Chem.Soc., 130, 2008
3VVZ
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Crystal Strucuture of The Rhodamine 6G-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium
分子名称: Putative regulatory protein, RHODAMINE 6G, SULFATE ION
著者Sakurai, K, Nikaido, E, Nakashima, R, Yamasaki, S, Yamaguchi, A, Nishino, K.
登録日2012-07-30
公開日2013-07-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献The crystal structure of multidrug-resistance regulator RamR with multiple drugs
Nat Commun, 4, 2013
3VVY
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Crystal Strucuture of The Ethidium-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium
分子名称: ETHIDIUM, Putative regulatory protein
著者Sakurai, K, Nikaido, E, Nakashima, R, Yamasaki, S, Yamaguchi, A, Nishino, K.
登録日2012-07-30
公開日2013-07-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献The crystal structure of multidrug-resistance regulator RamR with multiple drugs
Nat Commun, 4, 2013
3VVX
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Crystal Strucuture of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium
分子名称: Putative regulatory protein, SULFATE ION
著者Sakurai, K, Nikaido, E, Nakashima, R, Yamasaki, S, Yamaguchi, A, Nishino, K.
登録日2012-07-30
公開日2013-07-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The crystal structure of multidrug-resistance regulator RamR with multiple drugs
Nat Commun, 4, 2013
3VW1
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Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium
分子名称: CHLORIDE ION, CRYSTAL VIOLET, Putative regulatory protein, ...
著者Sakurai, K, Yamasaki, S, Nakashima, R, Nikaido, E, Yamaguchi, A, Nishino, K.
登録日2012-07-30
公開日2013-07-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献The crystal structure of multidrug-resistance regulator RamR with multiple drugs
Nat Commun, 4, 2013
3VW0
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Crystal Structure of The Dequalinum-bound Form of RamR (Transcriptional Regulator of TetR Family) From Salmonella Typhimurium
分子名称: DEQUALINIUM, Putative regulatory protein, SULFATE ION
著者Sakurai, K, Yamasaki, S, Nakashima, R, Nikaido, E, Yamaguchi, A, Nishino, K.
登録日2012-07-30
公開日2013-07-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The crystal structure of multidrug-resistance regulator RamR with multiple drugs
Nat Commun, 4, 2013
3VW2
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Crystal Strucuture of The Berberine-bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium
分子名称: BERBERINE, Putative regulatory protein, SULFATE ION
著者Sakurai, K, Nikaido, E, Nakashima, R, Yamasaki, S, Yamaguchi, A, Nishino, K.
登録日2012-07-30
公開日2013-07-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献The crystal structure of multidrug-resistance regulator RamR with multiple drugs
Nat Commun, 4, 2013
2ZWU
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BU of 2zwu by Molmil
Crystal Structure of Camphor Soaked Ferric Cytochrome P450cam
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
著者Sakurai, K, Shimada, H, Hayashi, T, Tsukihara, T.
登録日2008-12-18
公開日2009-02-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Substrate binding induces structural changes in cytochrome P450cam
Acta Crystallogr.,Sect.F, 65, 2009
2ZWT
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Crystal Structure of Ferric Cytochrome P450cam
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
著者Sakurai, K, Shimada, H, Hayashi, T, Tsukihara, T.
登録日2008-12-18
公開日2009-02-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Substrate binding induces structural changes in cytochrome P450cam
Acta Crystallogr.,Sect.F, 65, 2009
5YIL
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BU of 5yil by Molmil
Hoisting-loop in bacterial multidrug exporter AcrB is a highly flexible hinge that enables the large motion of the subdomains
分子名称: Multidrug efflux pump subunit AcrB
著者Zwama, M, Sakurai, K, Hayashi, K, Nakashima, R, Kitagawa, K, Nishino, K, Yamaguchi, A.
登録日2017-10-05
公開日2017-11-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Hoisting-Loop in Bacterial Multidrug Exporter AcrB Is a Highly Flexible Hinge That Enables the Large Motion of the Subdomains.
Front Microbiol, 8, 2017
6IIA
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BU of 6iia by Molmil
MexB in complex with LMNG
分子名称: Lauryl Maltose Neopentyl Glycol, Multidrug resistance protein MexB
著者Nakashima, R, Sakurai, K, Nakao, K.
登録日2018-10-04
公開日2019-03-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Crystal structures of multidrug efflux pump MexB bound with high-molecular-mass compounds.
Sci Rep, 9, 2019
3WRL
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BU of 3wrl by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure of P450cam intermedite
To be published
3WRK
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BU of 3wrk by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.609 Å)
主引用文献Structure of P450cam intermedite
To be Published
3WRH
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BU of 3wrh by Molmil
Crystal structure of P450cam
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Kishimoto, A, Takagi, K, Amano, A, Sakurai, K, Mizushima, T, Shimada, H.
登録日2014-02-25
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Structure of P450cam intermedite
To be Published
6IE9
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BU of 6ie9 by Molmil
RamR in complex with chenodeoxycholic acid
分子名称: CHENODEOXYCHOLIC ACID, Regulatory protein, SULFATE ION
著者Nakashima, R, Sakurai, K, Yamasaki, S, Nishino, K.
登録日2018-09-13
公開日2019-02-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of the multidrug resistance regulator RamR complexed with bile acids.
Sci Rep, 9, 2019
6IE8
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RamR in complex with cholic acid
分子名称: CHOLIC ACID, Regulatory protein, SULFATE ION
著者Nakashima, R, Sakurai, K, Yamasaki, S, Nishino, K.
登録日2018-09-13
公開日2019-02-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the multidrug resistance regulator RamR complexed with bile acids.
Sci Rep, 9, 2019
3AOD
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Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
分子名称: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, Acriflavine resistance protein B, RIFAMPICIN
著者Nakashima, R, Sakurai, K, Yamaguchi, A.
登録日2010-09-23
公開日2011-11-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3AOC
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Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
分子名称: Acriflavine resistance protein B, ERYTHROMYCIN A
著者Nakashima, R, Sakurai, K, Yamaguchi, A.
登録日2010-09-23
公開日2011-11-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011
3AOA
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Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
分子名称: Acriflavine resistance protein B
著者Nakashima, R, Sakurai, K, Yamaguchi, A.
登録日2010-09-23
公開日2011-11-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket
Nature, 480, 2011

 

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