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PDB: 61 results

6FAK
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Human afamin orthorhombic crystal form by controlled hydration
Descriptor: 1,2-ETHANEDIOL, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rupp, B, Naschberger, A, Bowler, M.W.
Deposit date:2017-12-15
Release date:2019-01-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Controlled dehydration, structural flexibility and gadolinium MRI contrast compound binding in the human plasma glycoprotein afamin.
Acta Crystallogr D Struct Biol, 75, 2019
5OKL
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Human afamin monoclinic crystal form
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Afamin, ...
Authors:Rupp, B, Naschberger, A, Bowler, M.W.
Deposit date:2017-07-25
Release date:2017-12-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural Evidence for a Role of the Multi-functional Human Glycoprotein Afamin in Wnt Transport.
Structure, 25, 2017
5L88
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AFAMIN ANTIBODY FRAGMENT, N14 FAB, L1- GLYCOSILATED, CRYSTAL FORM I, non-parsimonious model
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Anti-afamin antibody N14, Fab fragment, ...
Authors:Rupp, B, Naschberger, A.
Deposit date:2016-06-07
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling.
Acta Crystallogr D Struct Biol, 72, 2016
5L9D
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AFAMIN ANTIBODY FRAGMENT, N14 FAB, L1- GLYCOSYLATED, CRYSTAL FORM I, parsimonious model
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Rupp, B, Naschberger, A.
Deposit date:2016-06-10
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling.
Acta Crystallogr D Struct Biol, 72, 2016
5L7X
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Afamin antibody fragment, N14 Fab, L1- glycosylated, crystal form II
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Mouse Antibody Fab Fragment, ...
Authors:Rupp, B, Naschberger, A.
Deposit date:2016-06-04
Release date:2016-07-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling.
Acta Crystallogr D Struct Biol, 72, 2016
6RQ7
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BU of 6rq7 by Molmil
Gadolinium MRI contrast compound binding in human plasma glycoprotein afamin - resurrection of highly anisotropic data
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rupp, B, Bowler, M.W, Naschberger, A, Juyoux, P, vonVelsen, J.
Deposit date:2019-05-15
Release date:2019-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Controlled dehydration, structural flexibility and gadolinium MRI contrast compound binding in the human plasma glycoprotein afamin.
Acta Crystallogr D Struct Biol, 75, 2019
6SBI
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X-ray structure of murine Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) in complex with inhibitor oxalate
Descriptor: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
Authors:Rupp, B, Naschberger, A, Weiss, A.K.H.
Deposit date:2019-07-21
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and functional comparison of fumarylacetoacetate domain containing protein 1 in human and mouse.
Biosci.Rep., 40, 2020
6SBJ
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X-ray structure of mus musculus Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) apo-form uuncomplexed
Descriptor: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
Authors:Rupp, B, Naschberger, A, Weiss, A.K.H.
Deposit date:2019-07-21
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural and functional comparison of fumarylacetoacetate domain containing protein 1 in human and mouse.
Biosci.Rep., 40, 2020
1OR2
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BU of 1or2 by Molmil
APOLIPOPROTEIN E3 (APOE3) TRUNCATION MUTANT 165
Descriptor: APOLIPOPROTEIN E
Authors:Rupp, B, Segelke, B.W, Forstner, M.
Deposit date:1999-03-25
Release date:2000-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational flexibility in the apolipoprotein E amino-terminal domain structure determined from three new crystal forms: implications for lipid binding.
Protein Sci., 9, 2000
1OR3
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APOLIPOPROTEIN E3 (APOE3), TRIGONAL TRUNCATION MUTANT 165
Descriptor: PROTEIN (APOLIPOPROTEIN E)
Authors:Rupp, B, Segelke, B.W.
Deposit date:1998-12-01
Release date:2000-05-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Conformational flexibility in the apolipoprotein E amino-terminal domain structure determined from three new crystal forms: implications for lipid binding.
Protein Sci., 9, 2000
1NFN
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BU of 1nfn by Molmil
APOLIPOPROTEIN E3 (APOE3)
Descriptor: APOLIPOPROTEIN E3
Authors:Rupp, B, Parkin, S.
Deposit date:1996-07-17
Release date:1997-01-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Novel mechanism for defective receptor binding of apolipoprotein E2 in type III hyperlipoproteinemia.
Nat.Struct.Biol., 3, 1996
1NFO
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BU of 1nfo by Molmil
APOLIPOPROTEIN E2 (APOE2, D154A MUTATION)
Descriptor: APOLIPOPROTEIN E2
Authors:Rupp, B, Parkin, S.
Deposit date:1996-07-17
Release date:1997-01-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel mechanism for defective receptor binding of apolipoprotein E2 in type III hyperlipoproteinemia.
Nat.Struct.Biol., 3, 1996
5LGH
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BU of 5lgh by Molmil
Afamin antibody fragment, N14 Fab, L1- glycosilated, crystal form II, same as 5L7X, but isomorphous setting indexed same as 5L88, 5L9D
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, MOUSE ANTIBODY FAB FRAGMENT, ...
Authors:Rupp, B, Naschberger, A.
Deposit date:2016-07-07
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The N14 anti-afamin antibody Fab: a rare VL1 CDR glycosylation, crystallographic re-sequencing, molecular plasticity and conservative versus enthusiastic modelling.
Acta Crystallogr D Struct Biol, 72, 2016
1BZ4
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BU of 1bz4 by Molmil
APOLIPOPROTEIN E3 (APO-E3), TRUNCATION MUTANT 165
Descriptor: PROTEIN (APOLIPOPROTEIN E)
Authors:Rupp, B, Segelke, B.
Deposit date:1998-11-05
Release date:1998-11-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Conformational flexibility in the apolipoprotein E amino-terminal domain structure determined from three new crystal forms: implications for lipid binding.
Protein Sci., 9, 2000
1EA8
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BU of 1ea8 by Molmil
Apolipoprotein E3 22kD fragment LYS146GLU mutant
Descriptor: APOLIPOPROTEIN E
Authors:Rupp, B, Peters-Libeu, C, Verderame, J.
Deposit date:2001-07-11
Release date:2001-07-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Apolipoprotein E3 22Kd Fragment Lys146Gln Mutant
To be Published
1H7I
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BU of 1h7i by Molmil
Apolipoprotein E3 22kD fragment LYS146GLN mutant
Descriptor: APOLIPOPROTEIN E
Authors:Rupp, B, Peters-Libeu, C, Verderame, J.
Deposit date:2001-07-08
Release date:2001-07-31
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Apolipoprotein E3 22Kd Fragment Lys146Gln Mutant
To be Published
12E8
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BU of 12e8 by Molmil
2E8 FAB FRAGMENT
Descriptor: IGG1-KAPPA 2E8 FAB (HEAVY CHAIN), IGG1-KAPPA 2E8 FAB (LIGHT CHAIN)
Authors:Rupp, B, Trakhanov, S.
Deposit date:1998-03-14
Release date:1998-08-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a monoclonal 2E8 Fab antibody fragment specific for the low-density lipoprotein-receptor binding region of apolipoprotein E refined at 1.9 A.
Acta Crystallogr.,Sect.D, null, 1999
1B68
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BU of 1b68 by Molmil
APOLIPOPROTEIN E4 (APOE4), 22K FRAGMENT
Descriptor: APOLIPOPROTEIN E
Authors:Rupp, B, Peters-Libeu, C.
Deposit date:1999-01-21
Release date:2001-07-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Interaction of the N-terminal domain of apolipoprotein E4 with heparin.
Biochemistry, 40, 2001
8PFH
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BU of 8pfh by Molmil
Crystal structure of the yeast septin complex Shs1-Cdc12-Cdc3-Cdc10
Descriptor: CDC10 isoform 1, CDC12 isoform 1, Cell division control protein 3, ...
Authors:Grupp, B, Denkhaus, L, Gerhardt, S, Gronemeyer, T.
Deposit date:2023-06-16
Release date:2023-12-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:The structure of a tetrameric septin complex reveals a hydrophobic element essential for NC-interface integrity.
Commun Biol, 7, 2024
1W30
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BU of 1w30 by Molmil
PyrR of Mycobacterium Tuberculosis as a potential drug target
Descriptor: PYRR BIFUNCTIONAL PROTEIN
Authors:Kantardjieff, K.A, Vasquez, C, Castro, P, Warfel, N.N, Rho, B.-S, Lekin, T, Kim, C.-Y, Segelke, B.W, Terwilliger, T, Rupp, B, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-07-11
Release date:2004-09-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of Pyrr (Rv1379) from Mycobacterium Tuberculosis: A Persistence Gene and Protein Drug Target
Acta Crystallogr.,Sect.D, 61, 2005
2FVH
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BU of 2fvh by Molmil
Crystal Structure of Rv1848, a Urease Gamma Subunit UreA (Urea amidohydrolase), from Mycobacterium Tuberculosis
Descriptor: Urease gamma subunit
Authors:Bursey, E.H, Yu, M, TB Structural Genomics Consortium (TBSGC), Lekin, T, Rupp, B, Kim, C.Y, Rho, B.S, Terwilliger, T.C.
Deposit date:2006-01-30
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Rv1848, a Urease Gamma Subunit UreA (Urea amidohydrolase), from Mycobacterium Tuberculosis
To be Published
2J9N
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BU of 2j9n by Molmil
Robotically harvested Trypsin complexed with Benzamidine containing polypeptide mediated crystal contacts
Descriptor: BENZAMIDINE, CALCIUM ION, CATIONIC TRYPSIN, ...
Authors:Viola, R, Carman, P, Walsh, J, Miller, E, Benning, M, Frankel, D, McPherson, A, Cudney, R, Rupp, B.
Deposit date:2006-11-14
Release date:2007-04-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Operator Assisted Harvesting of Protein Crystals Using a Universal Micromanipulation Robot.
J.Appl.Crystallogr., 40, 2007
8QXQ
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BU of 8qxq by Molmil
PsiM in complex with SAH and psilocybin
Descriptor: CHLORIDE ION, Psilocybin synthase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Werten, S, Hudspeth, J, Rupp, B.
Deposit date:2023-10-24
Release date:2024-04-03
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Methyl transfer in psilocybin biosynthesis.
Nat Commun, 15, 2024
1HKV
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BU of 1hkv by Molmil
mycobacterium diaminopimelate dicarboxylase (lysa)
Descriptor: DIAMINOPIMELATE DECARBOXYLASE, LYSINE, PYRIDOXAL-5'-PHOSPHATE
Authors:Gokulan, K, Rupp, B, Pavelka Jr, M.S, Jacobs Jr, W.R, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
Deposit date:2003-03-11
Release date:2003-03-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Mycobacterium Tuberculosis Diaminopimelate Decarboxylase, an Essential Enzyme in Bacterial Lysine Biosynthesis
J.Biol.Chem., 278, 2003
1JBC
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BU of 1jbc by Molmil
CONCANAVALIN A
Descriptor: CALCIUM ION, CONCANAVALIN A, MANGANESE (II) ION
Authors:Parkin, S, Rupp, B, Hope, H.
Deposit date:1996-08-23
Release date:1997-02-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Atomic resolution structure of concanavalin A at 120 K.
Acta Crystallogr.,Sect.D, 52, 1996

 

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