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PDB: 169 results

7UZF
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BU of 7uzf by Molmil
Rat Kidney V-ATPase with SidK, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7UZI
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BU of 7uzi by Molmil
Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7UZH
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BU of 7uzh by Molmil
Rat Kidney V-ATPase with SidK, State 2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7UZG
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BU of 7uzg by Molmil
Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7Q21
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BU of 7q21 by Molmil
III2-IV2 respiratory supercomplex from Corynebacterium glutamicum
Descriptor: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
Authors:Kovalova, T, Moe, A, Krol, S, Yanofsky, D.J, Bott, M, Sjostrand, D, Rubinstein, J.L, Hogbom, M, Brzezinski, P.
Deposit date:2021-10-22
Release date:2022-02-02
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:The respiratory supercomplex from C. glutamicum.
Structure, 30, 2022
9DM1
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Mycobacterial supercomplex malate:quinone oxidoreductase assembly
Descriptor: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
Authors:Di Trani, J.M, Rubinstein, J.L.
Deposit date:2024-09-11
Release date:2024-10-23
Last modified:2025-03-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM of native membranes reveals an intimate connection between the Krebs cycle and aerobic respiration in mycobacteria.
Proc.Natl.Acad.Sci.USA, 122, 2025
9B8O
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BU of 9b8o by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, Vo
Descriptor: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-06-26
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9B8Q
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BU of 9b8q by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, peripheral stalks
Descriptor: V-type proton ATPase 116 kDa subunit a isoform 1, V-type proton ATPase subunit C 1, V-type proton ATPase subunit E 1, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9B8P
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BU of 9b8p by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, V1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit D, H(+)-transporting two-sector ATPase, ...
Authors:Coupland, E.M, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-07-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRB
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BU of 9brb by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 1
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRD
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BU of 9brd by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3
Descriptor: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9BRC
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BU of 9brc by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 2
Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ...
Authors:Coupland, C.E, Rubinstein, J.L.
Deposit date:2024-05-11
Release date:2024-06-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9COP
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BU of 9cop by Molmil
Yeast RAVE bound to V-ATPase V1 complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Regulator of V-ATPase in vacuolar membrane protein 1, ...
Authors:Wang, H, Rubinstein, J.L.
Deposit date:2024-07-17
Release date:2024-11-20
Last modified:2024-12-18
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure of yeast RAVE bound to a partial V 1 complex.
Proc.Natl.Acad.Sci.USA, 121, 2024
5KGF
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BU of 5kgf by Molmil
Structural model of 53BP1 bound to a ubiquitylated and methylated nucleosome, at 4.5 A resolution
Descriptor: DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
Authors:Wilson, M.D, Benlekbir, S, Sicheri, F, Rubinstein, J.L, Durocher, D.
Deposit date:2016-06-13
Release date:2016-07-27
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.54 Å)
Cite:The structural basis of modified nucleosome recognition by 53BP1.
Nature, 536, 2016
3J0J
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BU of 3j0j by Molmil
Fitted atomic models of Thermus thermophilus V-ATPase subunits into cryo-EM map
Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
Authors:Lau, W.C.Y, Rubinstein, J.L.
Deposit date:2011-08-24
Release date:2011-12-14
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Subnanometre-resolution structure of the intact Thermus thermophilus H+-driven ATP synthase.
Nature, 481, 2012
6U7H
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BU of 6u7h by Molmil
Cryo-EM structure of the HCoV-229E spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, Z, Benlekbir, S, Rubinstein, J.L, Rini, J.M.
Deposit date:2019-09-02
Release date:2019-11-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
3J9T
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BU of 3j9t by Molmil
Yeast V-ATPase state 1
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Zhao, J, Benlekbir, S, Rubinstein, J.L.
Deposit date:2015-02-23
Release date:2015-05-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Electron cryomicroscopy observation of rotational states in a eukaryotic V-ATPase.
Nature, 521, 2015
9MQZ
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BU of 9mqz by Molmil
Structure of mycobacterial NDH2 (type II NADH:quinone oxidoreductase) with 2-mercapto-quinazolinone inhibitor.
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, N-cyclohexyl-2-[(4-oxo-1,4-dihydroquinazolin-2-yl)sulfanyl]acetamide, NADH:ubiquinone reductase (non-electrogenic)
Authors:Liang, Y, Rubinstein, J.L.
Deposit date:2025-01-06
Release date:2025-01-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of mycobacterial NDH-2 bound to a 2-mercapto-quinazolinone inhibitor
To Be Published
9MQY
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BU of 9mqy by Molmil
Structure of mycobacterial NDH2 (type II NADH:quinone oxidoreductase)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NADH:ubiquinone reductase (non-electrogenic)
Authors:Liang, Y, Rubinstein, J.L.
Deposit date:2025-01-06
Release date:2025-01-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of mycobacterial NDH-2 bound to a 2-mercapto-quinazolinone inhibitor
To Be Published
6O7V
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BU of 6o7v by Molmil
Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 1
Descriptor: Putative protein YPR170W-B, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Vasanthakumar, T, Bueler, S.A, Wu, D, Beilsten-Edmands, V, Robinson, C.V, Rubinstein, J.L.
Deposit date:2019-03-08
Release date:2019-04-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structural comparison of the vacuolar and Golgi V-ATPases fromSaccharomyces cerevisiae.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6O7T
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BU of 6o7t by Molmil
Saccharomyces cerevisiae V-ATPase Vph1-VO
Descriptor: Putative protein YPR170W-B, V-type proton ATPase subunit a, vacuolar isoform, ...
Authors:Vasanthakumar, T, Bueler, S.A, Wu, D, Beilsten-Edmands, V, Robinson, C.V, Rubinstein, J.L.
Deposit date:2019-03-08
Release date:2019-04-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural comparison of the vacuolar and Golgi V-ATPases fromSaccharomyces cerevisiae.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6O7U
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BU of 6o7u by Molmil
Saccharomyces cerevisiae V-ATPase Stv1-VO
Descriptor: Putative protein YPR170W-B, V-type proton ATPase subunit a, Golgi isoform, ...
Authors:Vasanthakumar, T, Bueler, S.A, Wu, D, Beilsten-Edmands, V, Robinson, C.V, Rubinstein, J.L.
Deposit date:2019-03-08
Release date:2019-04-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural comparison of the vacuolar and Golgi V-ATPases fromSaccharomyces cerevisiae.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6O7W
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BU of 6o7w by Molmil
Saccharomyces cerevisiae V-ATPase Stv1-V1VO State 2
Descriptor: Putative protein YPR170W-B, V-type proton ATPase subunit B, V-type proton ATPase subunit C, ...
Authors:Vasanthakumar, T, Bueler, S.A, Wu, D, Beilsten-Edmands, V, Robinson, C.V, Rubinstein, J.L.
Deposit date:2019-03-08
Release date:2019-04-03
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural comparison of the vacuolar and Golgi V-ATPases fromSaccharomyces cerevisiae.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
8UX1
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BU of 8ux1 by Molmil
Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
Descriptor: 153-bp Widom 601 DNA forward strand, 153-bp Widom 601 DNA reverse strand, GTP-binding nuclear protein Ran, ...
Authors:Huang, S.K, Rubinstein, J.L, Kay, L.E.
Deposit date:2023-11-08
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
To Be Published
7UZK
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BU of 7uzk by Molmil
Rat Kidney V1 complex lacking subunit H with SidK and NCOA7B, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published

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PDB entries from 2025-03-26

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