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PDB: 157 results

8Z4G
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BU of 8z4g by Molmil
Structure of the S-ring region of the Vibrio flagellar MS-ring protein FliF with 35-fold symmetry applied
Descriptor: Flagellar M-ring protein,Flagellar motor switch protein FliG
Authors:Takekawa, N, Nishikino, T, Kishikawa, J, Hirose, M, Kato, T, Imada, K, Homma, M.
Deposit date:2024-04-17
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural analysis of S-ring composed of FliFG fusion proteins in marine Vibrio polar flagellar motors
To Be Published
5GTU
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BU of 5gtu by Molmil
Structural and mechanistic insights into regulation of the retromer coat by TBC1d5
Descriptor: TBC1 domain family member 5, Vacuolar protein sorting-associated protein 29
Authors:Jia, D, Rosen, M.
Deposit date:2016-08-23
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and mechanistic insights into regulation of the retromer coat by TBC1d5
Nat Commun, 7, 2016
5AVG
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BU of 5avg by Molmil
The 0.95 angstrom structure of thaumatin crystallized in high-strength agarose hydrogel
Descriptor: Thaumatin-1
Authors:Sugiyama, S, Shimizu, N, Maruyama, M, Sazaki, G, Hirose, M, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H.
Deposit date:2015-06-16
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
6QHG
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BU of 6qhg by Molmil
Structure of the cap-binding domain of Rift Valley Fever virus L protein
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
Authors:Gogrefe, N, Reindl, S, Gunther, S, Rosenthal, M.
Deposit date:2019-01-16
Release date:2019-05-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.483 Å)
Cite:Structure of a functional cap-binding domain in Rift Valley fever virus L protein.
Plos Pathog., 15, 2019
8ASG
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BU of 8asg by Molmil
Structure of the SFTSV L protein bound in a resting state [RESTING]
Descriptor: MAGNESIUM ION, RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*GP*AP*UP*GP*A*)-3'), RNA (5'-R(*GP*AP*UP*CP*UP*GP*GP*GP*CP*GP*GP*UP*CP*UP*UP*UP*GP*UP*GP*U*)-3'), ...
Authors:Williams, H.M, Thorkelsson, S.R, Vogel, D, Milewski, M, Busch, C, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
Deposit date:2022-08-19
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into viral genome replication by the severe fever with thrombocytopenia syndrome virus L protein.
Nucleic Acids Res., 51, 2023
8ASB
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BU of 8asb by Molmil
Structure of the SFTSV L protein stalled at early elongation with the endonuclease domain in a raised conformation [EARLY-ELONGATION-ENDO]
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, MAGNESIUM ION, RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*CP*AP*GP*A)-3'), ...
Authors:Williams, H.M, Thorkelsson, S.R, Vogel, D, Milewski, M, Busch, C, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
Deposit date:2022-08-18
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural insights into viral genome replication by the severe fever with thrombocytopenia syndrome virus L protein.
Nucleic Acids Res., 51, 2023
8ASD
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BU of 8asd by Molmil
Structure of the SFTSV L protein stalled at late elongation [LATE-ELONGATION]
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*AP*AP*AP*GP*AP*UP*CP*UP*GP*GP*GP*CP*GP*GP*UP*CP*UP*UP*UP*GP*UP*GP*U)-3'), ...
Authors:Williams, H.M, Thorkelsson, S.R, Vogel, D, Milewski, M, Busch, C, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
Deposit date:2022-08-19
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into viral genome replication by the severe fever with thrombocytopenia syndrome virus L protein.
Nucleic Acids Res., 51, 2023
8AS7
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BU of 8as7 by Molmil
Structure of the SFTSV L protein stalled at early elongation [EARLY-ELONGATION]
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, MAGNESIUM ION, ...
Authors:Williams, H.M, Thorkelsson, S.R, Vogel, D, Milewski, M, Busch, C, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
Deposit date:2022-08-18
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into viral genome replication by the severe fever with thrombocytopenia syndrome virus L protein.
Nucleic Acids Res., 51, 2023
8AS6
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BU of 8as6 by Molmil
Structure of the SFTSV L protein bound to 5' cRNA hook [5' HOOK]
Descriptor: RNA (5'-R(*AP*CP*AP*CP*AP*GP*AP*GP*AP*CP*GP*CP*CP*C)-3'), RNA-dependent RNA-polymerase L protein
Authors:Williams, H.M, Thorkelsson, S.R, Vogel, D, Milewski, M, Busch, C, Cusack, S, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
Deposit date:2022-08-18
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into viral genome replication by the severe fever with thrombocytopenia syndrome virus L protein.
Nucleic Acids Res., 51, 2023
6Y6K
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BU of 6y6k by Molmil
Cryo-EM structure of a Phenuiviridae L protein
Descriptor: MAGNESIUM ION, RNA-dependent RNA polymerase
Authors:Vogel, D, Thorkelsson, S.R, Quemin, E, Meier, K, Kouba, T, Gogrefe, N, Busch, C, Reindl, S, Guenther, S, Cusack, S, Gruenewald, K, Rosenthal, M.
Deposit date:2020-02-26
Release date:2020-04-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:Structural and functional characterization of the severe fever with thrombocytopenia syndrome virus L protein.
Nucleic Acids Res., 48, 2020
3KY9
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BU of 3ky9 by Molmil
Autoinhibited Vav1
Descriptor: Proto-oncogene vav, ZINC ION
Authors:Tomchick, D.R, Rosen, M.K, Machius, M, Yu, B.
Deposit date:2009-12-04
Release date:2010-02-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.731 Å)
Cite:Structural and Energetic Mechanisms of Cooperative Autoinhibition and Activation of Vav1
Cell(Cambridge,Mass.), 140, 2010
3KZI
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BU of 3kzi by Molmil
Crystal Structure of Monomeric Form of Cyanobacterial Photosystem II
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Gabdulkhakov, A, Guskov, A, Broser, M, Kern, J, Zouni, A, Saenger, W.
Deposit date:2009-12-08
Release date:2010-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Crystal Structure of Monomeric Photosystem II from Thermosynechococcus elongatus at 3.6-A Resolution
J.Biol.Chem., 285, 2010
3WR7
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BU of 3wr7 by Molmil
Crystal Structure of Spermidine Acetyltransferase from Escherichia coli
Descriptor: COENZYME A, SPERMIDINE, Spermidine N1-acetyltransferase
Authors:Sugiyama, S, Ishikawa, S, Tomitori, S, Niiyama, M, Hirose, M, Miyazaki, Y, Higashi, K, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Kashiwagi, K, Igarashi, K, Matsumura, H.
Deposit date:2014-02-20
Release date:2015-09-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism underlying promiscuous polyamine recognition by spermidine acetyltransferase
Int.J.Biochem.Cell Biol., 76, 2016
4TKB
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BU of 4tkb by Molmil
The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lauric acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
7ALP
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BU of 7alp by Molmil
Severe fever with thrombocytopenia syndrome virus (Phenuiviridae) L protein
Descriptor: MAGNESIUM ION, Replicase
Authors:Cusack, S, Rosenthal, M.
Deposit date:2020-10-07
Release date:2021-04-21
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Errors in the deposited SFTSV L protein structure.
Nat Microbiol, 6, 2021
3ZR1
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BU of 3zr1 by Molmil
Crystal structure of human MTH1
Descriptor: 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE, ACETATE ION, SULFATE ION
Authors:Svensson, L.M, Jemth, A, Desroses, M, Loseva, O, Helleday, T, Hogbom, M, Stenmark, P.
Deposit date:2011-06-13
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Human Mth1 and the 8-Oxo-Dgmp Product Complex.
FEBS Lett., 585, 2011
3ZR0
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BU of 3zr0 by Molmil
Crystal structure of human MTH1 in complex with 8-oxo-dGMP
Descriptor: 7,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE, 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, SULFATE ION
Authors:Svensson, L.M, Jemth, A, Desroses, M, Loseva, O, Helleday, T, Hogbom, M, Stenmark, P.
Deposit date:2011-06-13
Release date:2011-07-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Human Mth1 and the 8-Oxo-Dgmp Product Complex.
FEBS Lett., 585, 2011
3SDG
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BU of 3sdg by Molmil
Ethionamide Boosters Part 2: Combining Bioisosteric Replacement and Structure-Based Drug Design to Solve Pharmacokinetic Issues in a Series of Potent 1,2,4-Oxadiazole EthR Inhibitors.
Descriptor: 4,4,4-trifluoro-1-{4-[3-(1,3-thiazol-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}butan-1-one, HTH-type transcriptional regulator EthR
Authors:Flipo, M, Desroses, M, Lecat-Guillet, N, Villemagne, B, Blondiaux, N, Leroux, F, Piveteau, C, Mathys, V, Flament, M.P, Siepmann, J, Villeret, V, Wohlkonig, A, Wintjens, R, Soror, S.H, Christophe, T, Jeon, H.K, Locht, C, Brodin, P, D prez, B, Baulard, A.R, Willand, N.
Deposit date:2011-06-09
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Ethionamide Boosters. 2. Combining Bioisosteric Replacement and Structure-Based Drug Design To Solve Pharmacokinetic Issues in a Series of Potent 1,2,4-Oxadiazole EthR Inhibitors.
J.Med.Chem., 55, 2012
3SFI
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BU of 3sfi by Molmil
Ethionamide Boosters Part 2: Combining Bioisosteric Replacement and Structure-Based Drug Design to Solve Pharmacokinetic Issues in a Series of Potent 1,2,4-Oxadiazole EthR Inhibitors.
Descriptor: 5,5,5-trifluoro-1-{4-[3-(1,3-thiazol-2-yl)-1,2,4-oxadiazol-5-yl]piperidin-1-yl}pentan-1-one, Transcriptional regulatory repressor protein (TETR-family)
Authors:Flipo, M, Desroses, M, Lecat-Guillet, N, Villemagne, B, Blondiaux, N, Leroux, F, Piveteau, C, Mathys, V, Flament, M.P, Siepmann, J, Villeret, V, Wohlkonig, A, Wintjens, R, Soror, S.H, Christophe, T, Jeon, H.K, Locht, C, Brodin, P, D prez, B, Baulard, A.R, Willand, N.
Deposit date:2011-06-13
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Ethionamide Boosters. 2. Combining Bioisosteric Replacement and Structure-Based Drug Design To Solve Pharmacokinetic Issues in a Series of Potent 1,2,4-Oxadiazole EthR Inhibitors.
J.Med.Chem., 55, 2012
4TJZ
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BU of 4tjz by Molmil
The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with capric acid
Descriptor: DECANOIC ACID, Fatty acid-binding protein, heart, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-25
Release date:2015-01-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKH
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BU of 4tkh by Molmil
The 0.93 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with myristic acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
4TKJ
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BU of 4tkj by Molmil
The 0.87 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with palmitic acid
Descriptor: 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, Fatty acid-binding protein, heart, ...
Authors:Sugiyama, S, Matsuoka, S, Mizohata, E, Matsuoka, D, Ishida, H, Hirose, M, Kakinouchi, K, Hara, T, Murakami, S, Inoue, T, Murata, M.
Deposit date:2014-05-26
Release date:2015-01-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:Water-mediated recognition of simple alkyl chains by heart-type Fatty-Acid-binding protein
Angew.Chem.Int.Ed.Engl., 54, 2015
7L5P
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BU of 7l5p by Molmil
Crystal structure of the covalently bonded complex of rilzabrutinib with BTK
Descriptor: (2E)-2-{(3R)-3-[4-amino-3-(2-fluoro-4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]piperidine-1-carbonyl}-4-methyl-4-[4-(oxetan-3-yl)piperazin-1-yl]pent-2-enenitrile, 1,2-ETHANEDIOL, SULFATE ION, ...
Authors:Bradshaw, J.M, Brameld, K.A, Mrosek, M, Lammens, A, Blaesse, M.
Deposit date:2020-12-22
Release date:2022-06-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:The Discovery Rilzabrutinib (PRN1008): A Reversible Covalent BTK Inhibitor for Immune Mediated Diseases
To Be Published
7L5O
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BU of 7l5o by Molmil
Crystal structure of the noncovalently bonded complex of rilzabrutinib with BTK
Descriptor: (2E)-2-{(3R)-3-[4-amino-3-(2-fluoro-4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]piperidine-1-carbonyl}-4-methyl-4-[4-(oxetan-3-yl)piperazin-1-yl]pent-2-enenitrile, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Bradshaw, J.M, Brameld, K.A, Mrosek, M, Lammens, A, Blaesse, M.
Deposit date:2020-12-22
Release date:2022-06-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:The Discovery Rilzabrutinib (PRN1008): A Reversible Covalent BTK Inhibitor for Immune Mediated Diseases
To Be Published
3SEO
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BU of 3seo by Molmil
Crystal structure of VopL C terminal domain
Descriptor: CHLORIDE ION, VopL C terminal domain protein
Authors:Yu, B, Rosen, M.K, Tomchick, D.R.
Deposit date:2011-06-10
Release date:2011-08-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.305 Å)
Cite:Mechanism of actin filament nucleation by the bacterial effector VopL.
Nat.Struct.Mol.Biol., 18, 2011

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數據於2024-11-13公開中

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