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PDB: 334 results

5R4C
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BU of 5r4c by Molmil
Crystal Structure of gamma-Chymotrypsin at pH 9, room temperature
Descriptor: IODIDE ION, SULFATE ION, gamma-chymotrypsin, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
5R48
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BU of 5r48 by Molmil
Crystal Structure of gamma-Chymotrypsin at pH 5.6, room temperature
Descriptor: IODIDE ION, SULFATE ION, gamma-chymotrypsin, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
5R4A
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BU of 5r4a by Molmil
Crystal Structure of deuterated gamma-Chymotrypsin at pH 9, room temperature
Descriptor: IODIDE ION, SULFATE ION, gamma-chymotrypsin, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
5R44
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BU of 5r44 by Molmil
Crystal Structure of gamma-Chymotrypsin at pH 7.5, room temperature
Descriptor: Chymotrypsinogen A, IODIDE ION, peptide SWPW, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
5R46
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BU of 5r46 by Molmil
Crystal Structure of deuterated gamma-Chymotrypsin at pH 5.6, room temperature
Descriptor: IODIDE ION, SULFATE ION, gamma-chymotrypsin, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
5R43
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BU of 5r43 by Molmil
Crystal Structure of deuterated gamma-Chymotrypsin at pH 7.5, cryo temperature
Descriptor: Chymotrypsinogen A, IODIDE ION, MALONIC ACID, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
3B3C
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BU of 3b3c by Molmil
Crystal structure of the M180A mutant of the aminopeptidase from Vibrio proteolyticus in complex with leucine phosphonic acid
Descriptor: Bacterial leucyl aminopeptidase, LEUCINE PHOSPHONIC ACID, POTASSIUM ION, ...
Authors:Ataie, N.J, Hoang, Q.Q, Petsko, G.A, Ringe, D.
Deposit date:2007-10-19
Release date:2007-11-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Zinc coordination geometry and ligand binding affinity: the structural and kinetic analysis of the second-shell serine 228 residue and the methionine 180 residue of the aminopeptidase from Vibrio proteolyticus.
Biochemistry, 47, 2008
5R4B
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BU of 5r4b by Molmil
Crystal Structure of deuterated gamma-Chymotrypsin at pH 9, cryo temperature
Descriptor: IODIDE ION, SULFATE ION, gamma-chymotrypsin, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
5R4D
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BU of 5r4d by Molmil
Crystal Structure of gamma-Chymotrypsin at pH 9, cryo temperature
Descriptor: IODIDE ION, SULFATE ION, gamma-chymotrypsin, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
5R47
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BU of 5r47 by Molmil
Crystal Structure of deuterated gamma-Chymotrypsin at pH 5.6, cryo temperature
Descriptor: IODIDE ION, MALONIC ACID, gamma-chymotrypsin, ...
Authors:Kreinbring, C.A, Wilson, M.A, Kovalevsky, A.Y, Blakeley, M.P, Fisher, S.Z, Lazar, L.M, Moulin, A.G, Novak, W.R, Petsko, G.A, Ringe, D.
Deposit date:2020-02-18
Release date:2021-09-01
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Effect of Temperature and pH on Ionizable Residues in gamma-Chymotrypsin: a X-ray and Neutron Crystallography Study
To be published
2PZV
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BU of 2pzv by Molmil
Crystal Structure of Ketosteroid Isomerase D40N from Pseudomonas Putida (pksi) with bound Phenol
Descriptor: PHENOL, Steroid Delta-isomerase
Authors:Pybus, B, Caaveiro, J.M.M, Petsko, G.A, Ringe, D.
Deposit date:2007-05-18
Release date:2007-06-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Testing Electrostatic complementarity in Enzyme Catalysis: Hydrogen Bonding in the Ketosteroid Isomerase Oxyanion Hole
PLoS Biol., 4, 2006
3B3S
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BU of 3b3s by Molmil
Crystal structure of the M180A mutant of the aminopeptidase from Vibrio proteolyticus in complex with leucine
Descriptor: Bacterial leucyl aminopeptidase, LEUCINE, SODIUM ION, ...
Authors:Ataie, N.J, Hoang, Q.Q, Petsko, G.A, Ringe, D.
Deposit date:2007-10-22
Release date:2007-11-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Zinc coordination geometry and ligand binding affinity: the structural and kinetic analysis of the second-shell serine 228 residue and the methionine 180 residue of the aminopeptidase from Vibrio proteolyticus.
Biochemistry, 47, 2008
1QIR
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BU of 1qir by Molmil
ASPARTATE AMINOTRANSFERASE FROM ESCHERICHIA COLI, C191Y MUTATION, WITH BOUND MALEATE
Descriptor: ASPARTATE AMINOTRANSFERASE, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Jeffery, C.J, Gloss, L.M, Petsko, G.A, Ringe, D.
Deposit date:1999-06-15
Release date:2000-06-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Role of Residues Outside the Active Site in Catalysis: Structural Basis for Function of C191 Mutants of E. Coli Aspartate Aminotransferase
Protein Eng., 13, 2000
3QXE
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BU of 3qxe by Molmil
Crystal Structure of Co-type Nitrile Hydratase from Pseudomonas putida.
Descriptor: COBALT (III) ION, Co-type Nitrile Hydratase alpha subunit, Co-type Nitrile Hydratase beta subunit, ...
Authors:Brodkin, H.R, Novak, W.R.P, Ringe, D, Petsko, G.A.
Deposit date:2011-03-01
Release date:2011-03-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Evidence of the Participation of Remote Residues in the Catalytic Activity of Co-Type Nitrile Hydratase from Pseudomonas putida.
Biochemistry, 50, 2011
1QIT
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BU of 1qit by Molmil
ASPARTATE AMINOTRANSFERASE FROM ESCHERICHIA COLI, C191W MUTATION, WITH BOUND MALEATE
Descriptor: ASPARTATE AMINOTRANSFERASE, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Jeffery, C.J, Gloss, L.M, Petsko, G.A, Ringe, D.
Deposit date:1999-06-15
Release date:2000-06-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Role of Residues Outside the Active Site in Catalysis: Structural Basis for Function of C191 Mutants of E. Coli Aspartate Aminotransferase
Protein Eng., 13, 2000
3TGI
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BU of 3tgi by Molmil
WILD-TYPE RAT ANIONIC TRYPSIN COMPLEXED WITH BOVINE PANCREATIC TRYPSIN INHIBITOR (BPTI)
Descriptor: BOVINE PANCREATIC TRYPSIN INHIBITOR, CALCIUM ION, SULFATE ION, ...
Authors:Pasternak, A, Ringe, D, Hedstrom, L.
Deposit date:1998-07-15
Release date:1998-12-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Comparison of Anionic and Cationic Trypsinogens: The Anionic Activation Domain is More Flexible in Solution and Differs in its Mode of Bpti Binding in the Crystal Structure
Protein Sci., 8, 1999
1QIS
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BU of 1qis by Molmil
ASPARTATE AMINOTRANSFERASE FROM ESCHERICHIA COLI, C191F MUTATION, WITH BOUND MALEATE
Descriptor: ASPARTATE AMINOTRANSFERASE, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Jeffery, C.J, Gloss, L.M, Petsko, G.A, Ringe, D.
Deposit date:1999-06-15
Release date:2000-06-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Role of Residues Outside the Active Site in Catalysis: Structural Basis for Function of C191 Mutants of E. Coli Aspartate Aminotransferase
Protein Eng., 13, 2000
2ACQ
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BU of 2acq by Molmil
AN ANION BINDING SITE IN HUMAN ALDOSE REDUCTASE: MECHANISTIC IMPLICATIONS FOR THE BINDING OF CITRATE, CACODYLATE, AND GLUCOSE-6-PHOSPHATE
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, ALDOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Harrison, D.H, Bohren, K.M, Gabbay, K.H, Petsko, G.A, Ringe, D.
Deposit date:1994-04-15
Release date:1994-07-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:An anion binding site in human aldose reductase: mechanistic implications for the binding of citrate, cacodylate, and glucose 6-phosphate.
Biochemistry, 33, 1994
1MUW
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BU of 1muw by Molmil
The 0.86 Angstrom Structure of Xylose Isomerase
Descriptor: HYDROXIDE ION, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Fenn, T.D, Ringe, D, Petsko, G.A.
Deposit date:2002-09-24
Release date:2002-11-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.86 Å)
Cite:Active Site Dynamics at 0.86A: Crystallographic Analysis of a Metal-Mediated Hydride Shift
To be Published
3SED
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BU of 3sed by Molmil
Crystal Structure of Ketosteroid Isomerase Variant M105A from Pseudomonos putida
Descriptor: Steroid Delta-isomerase
Authors:Somarowthu, S, Brodkin, H.R, D'Aquino, J.A, Ringe, D, Ondrechen, M.J, Beuning, P.J.
Deposit date:2011-06-10
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.302 Å)
Cite:A tale of two isomerases: compact versus extended active sites in ketosteroid isomerase and phosphoglucose isomerase.
Biochemistry, 50, 2011
3QYH
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BU of 3qyh by Molmil
Crystal Structure of Co-type Nitrile Hydratase beta-H71L from Pseudomonas putida.
Descriptor: COBALT (III) ION, Co-type Nitrile Hydratase alpha subunit, Co-type Nitrile Hydratase beta subunit
Authors:Brodkin, H.R, Novak, W.R.P, Ringe, D, Petsko, G.A.
Deposit date:2011-03-03
Release date:2011-03-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evidence of the Participation of Remote Residues in the Catalytic Activity of Co-Type Nitrile Hydratase from Pseudomonas putida.
Biochemistry, 50, 2011
2GMT
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BU of 2gmt by Molmil
THREE-DIMENSIONAL STRUCTURE OF CHYMOTRYPSIN INACTIVATED WITH (2S) N-ACETYL-L-ALANYL-L-PHENYLALANYL-CHLOROETHYL KETONE: IMPLICATIONS FOR THE MECHANISM OF INACTIVATION OF SERINE PROTEASES BY CHLOROKETONES
Descriptor: (2S) N-ACETYL-L-ALANYL-ALPHAL-PHENYLALANYL-CHLOROETHYLKETONE, GAMMA-CHYMOTRYPSIN
Authors:Kreutter, K, Steinmetz, A.C.U, Liang, T.-C, Prorok, M, Abeles, R, Ringe, D.
Deposit date:1994-09-07
Release date:1994-11-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structure of chymotrypsin inactivated with (2S)-N-acetyl-L-alanyl-L-phenylalanyl alpha-chloroethane: implications for the mechanism of inactivation of serine proteases by chloroketones.
Biochemistry, 33, 1994
1XQL
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BU of 1xql by Molmil
Effect of a Y265F Mutant on the Transamination Based Cycloserine Inactivation of Alanine Racemase
Descriptor: (5-HYDROXY-4-{[(3-HYDROXYISOXAZOL-4-YL)AMINO]METHYL}-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, (R)-4-AMINO-ISOXAZOLIDIN-3-ONE, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ...
Authors:Fenn, T.D, Holyoak, T, Stamper, G.F, Ringe, D.
Deposit date:2004-10-12
Release date:2005-01-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Effect of a Y265F Mutant on the Transamination-Based Cycloserine Inactivation of Alanine Racemase
Biochemistry, 44, 2005
1Q0X
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BU of 1q0x by Molmil
Anti-morphine Antibody 9B1 Unliganded Form
Descriptor: Fab 9B1, heavy chain, light chain, ...
Authors:Pozharski, E, Wilson, M.A, Hewagama, A, Shanafelt, A.B, Petsko, G, Ringe, D.
Deposit date:2003-07-17
Release date:2004-04-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Anchoring a cationic ligand: the structure of the Fab fragment of the anti-morphine antibody 9B1 and its complex with morphine
J.Mol.Biol., 337, 2004
2ANP
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BU of 2anp by Molmil
Functional Glutamate 151 to Histidine mutant of the aminopeptidase from Aeromonas Proteolytica.
Descriptor: SODIUM ION, ZINC ION, leucyl aminopeptidase
Authors:Bzymek, K.P, Moulin, A, Swierczek, S.I, Ringe, D, Petsko, G.A, Holz, R.C.
Deposit date:2005-08-11
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Kinetic, Spectroscopic, and X-ray Crystallographic Characterization of the Functional E151H Aminopeptidase from Aeromonas proteolytica.
Biochemistry, 44, 2005

224004

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