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PDB: 225 results

6B6X
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BU of 6b6x by Molmil
Crystal structure of Desulfovibrio vulgaris carbon monoxide dehydrogenase, dithionite-reduced (protein batch 2), canonical C-cluster
Descriptor: CHLORIDE ION, Carbon monoxide dehydrogenase, FE(4)-NI(1)-S(4) CLUSTER, ...
Authors:Wittenborn, E.C, Drennan, C.L.
Deposit date:2017-10-03
Release date:2018-10-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Redox-dependent rearrangements of the NiFeS cluster of carbon monoxide dehydrogenase.
Elife, 7, 2018
3I04
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BU of 3i04 by Molmil
Cyanide-bound structure of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase from Moorella thermoacetica, cyanide-bound C-cluster
Descriptor: ACETATE ION, COPPER (I) ION, CYANIDE ION, ...
Authors:Kung, Y, Doukov, T.I, Drennan, C.L.
Deposit date:2009-06-24
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic snapshots of cyanide- and water-bound C-clusters from bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase.
Biochemistry, 48, 2009
3EPT
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BU of 3ept by Molmil
Structure of the rebeccamycin biosynthetic enzyme RebC with reduced flavin
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, RebC, SODIUM ION
Authors:Ryan, K.S, Drennan, C.L.
Deposit date:2008-09-30
Release date:2008-12-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:The FAD cofactor of RebC shifts to an IN conformation upon flavin reduction
Biochemistry, 47, 2008
6V59
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BU of 6v59 by Molmil
Crystal structure of the diheme peroxidase BthA Y463M variant from Burkholderia thailandensis E264
Descriptor: CHLORIDE ION, Di-haem cytochrome c peroxidase family protein, GLYCEROL, ...
Authors:Cohen, S.E, Drennan, C.L.
Deposit date:2019-12-03
Release date:2020-07-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.593 Å)
Cite:A Stable Ferryl Porphyrin at the Active Site of Y463M BthA.
J.Am.Chem.Soc., 142, 2020
6B9T
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BU of 6b9t by Molmil
Crystal structure of MPnS with substrate 2-hydroxyethylphosphonate (2-HEP) and Fe(II) bound
Descriptor: (2-hydroxyethyl)phosphonic acid, FE (III) ION, FORMIC ACID, ...
Authors:Born, D.A, Drennan, C.L.
Deposit date:2017-10-11
Release date:2017-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis for methylphosphonate biosynthesis.
Science, 358, 2017
6B9S
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BU of 6b9s by Molmil
MPnS crystallized in the absence of substrate
Descriptor: FE (III) ION, Methylphosphonate synthase
Authors:Born, D.A, Drennan, C.L.
Deposit date:2017-10-11
Release date:2017-12-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.373 Å)
Cite:Structural basis for methylphosphonate biosynthesis.
Science, 358, 2017
6VUE
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BU of 6vue by Molmil
wild-type choline TMA lyase in complex with 1-methyl-1,2,3,6-tetrahydropyridin-3-ol
Descriptor: (3S)-1-methyl-1,2,3,6-tetrahydropyridin-3-ol, Choline trimethylamine-lyase, SODIUM ION
Authors:Ortega, M.A, Drennan, C.L.
Deposit date:2020-02-15
Release date:2020-11-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Discovery of a Cyclic Choline Analog That Inhibits Anaerobic Choline Metabolism by Human Gut Bacteria.
Acs Med.Chem.Lett., 11, 2020
8STA
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BU of 8sta by Molmil
Isobutyryl-CoA mutase fused in the presence of GMPPCP
Descriptor: Isobutyryl-CoA mutase fused
Authors:Vaccaro, F.A, Drennan, C.L.
Deposit date:2023-05-09
Release date:2023-08-09
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (7.3 Å)
Cite:Structural insight into G-protein chaperone-mediated maturation of a bacterial adenosylcobalamin-dependent mutase.
J.Biol.Chem., 299, 2023
6CIQ
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BU of 6ciq by Molmil
Pyruvate:ferredoxin oxidoreductase from Moorella thermoacetica with coenzyme A bound
Descriptor: COENZYME A, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2018-02-24
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.302 Å)
Cite:Binding site for coenzyme A revealed in the structure of pyruvate:ferredoxin oxidoreductase fromMoorella thermoacetica.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CIO
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BU of 6cio by Molmil
Pyruvate:ferredoxin oxidoreductase from Moorella thermoacetica with lactyl-TPP bound
Descriptor: 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-CARBOXY-1-HYDROXYETHYL)-5-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2018-02-24
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Binding site for coenzyme A revealed in the structure of pyruvate:ferredoxin oxidoreductase fromMoorella thermoacetica.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CIP
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BU of 6cip by Molmil
Pyruvate:ferredoxin oxidoreductase from Moorella thermoacetica with acetyl-TPP bound
Descriptor: 2-ACETYL-THIAMINE DIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2018-02-24
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.189 Å)
Cite:Binding site for coenzyme A revealed in the structure of pyruvate:ferredoxin oxidoreductase fromMoorella thermoacetica.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CIN
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BU of 6cin by Molmil
Crystal structure of pyruvate:ferredoxin oxidoreductase from Moorella thermoacetica
Descriptor: IRON/SULFUR CLUSTER, MAGNESIUM ION, PYRUVATE-FERREDOXIN OXIDOREDUCTASE, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2018-02-24
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Binding site for coenzyme A revealed in the structure of pyruvate:ferredoxin oxidoreductase fromMoorella thermoacetica.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4TVW
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BU of 4tvw by Molmil
Resorufin ligase with bound resorufin-AMP analog
Descriptor: 5'-O-{[5-(7-hydroxy-3-oxo-3H-phenoxazin-2-yl)pentanoyl]sulfamoyl}adenosine, Lipoate-protein ligase A
Authors:Goldman, P.J, Drennan, C.L.
Deposit date:2014-06-28
Release date:2014-10-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.505 Å)
Cite:Computational design of a red fluorophore ligase for site-specific protein labeling in living cells.
Proc.Natl.Acad.Sci.USA, 111, 2014
3I01
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BU of 3i01 by Molmil
Native structure of bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase from Moorella thermoacetica, water-bound C-cluster.
Descriptor: ACETATE ION, COPPER (I) ION, Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha, ...
Authors:Kung, Y, Doukov, T.I, Drennan, C.L.
Deposit date:2009-06-24
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic snapshots of cyanide- and water-bound C-clusters from bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase.
Biochemistry, 48, 2009
1ELY
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BU of 1ely by Molmil
E. COLI ALKALINE PHOSPHATASE MUTANT (S102C)
Descriptor: ALKALINE PHOSPHATASE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Stec, B, Hehir, M, Brennan, C, Nolte, M, Kantrowitz, E.R.
Deposit date:1998-02-10
Release date:1998-05-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Kinetic and X-ray structural studies of three mutant E. coli alkaline phosphatases: insights into the catalytic mechanism without the nucleophile Ser102.
J.Mol.Biol., 277, 1998
1ELX
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BU of 1elx by Molmil
E. COLI ALKALINE PHOSPHATASE MUTANT (S102A)
Descriptor: ALKALINE PHOSPHATASE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Stec, B, Hehir, M, Brennan, C, Nolte, M, Kantrowitz, E.R.
Deposit date:1998-02-10
Release date:1998-05-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Kinetic and X-ray structural studies of three mutant E. coli alkaline phosphatases: insights into the catalytic mechanism without the nucleophile Ser102.
J.Mol.Biol., 277, 1998
6VXC
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BU of 6vxc by Molmil
Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile
Descriptor: GLYCEROL, Trans-4-hydroxy-L-proline dehydratase
Authors:Backman, L.R.F, Drennan, C.L.
Deposit date:2020-02-21
Release date:2020-04-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular basis for catabolism of the abundant metabolitetrans-4-hydroxy-L-proline by a microbial glycyl radical enzyme.
Elife, 9, 2020
6W4X
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BU of 6w4x by Molmil
Holocomplex of E. coli class Ia ribonucleotide reductase with GDP and TTP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MU-OXO-DIIRON, ...
Authors:Kang, G, Taguchi, A, Stubbe, J, Drennan, C.
Deposit date:2020-03-11
Release date:2020-04-08
Last modified:2020-05-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of a trapped radical transfer pathway within a ribonucleotide reductase holocomplex.
Science, 368, 2020
4ERM
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BU of 4erm by Molmil
Crystal structure of the dATP inhibited E. coli class Ia ribonucleotide reductase complex at 4 Angstroms resolution
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zimanyi, C.M, Drennan, C.L.
Deposit date:2012-04-20
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.95 Å)
Cite:Tangled up in knots: structures of inactivated forms of E. coli class Ia ribonucleotide reductase.
Structure, 20, 2012
3GJA
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BU of 3gja by Molmil
CytC3
Descriptor: ACETATE ION, CytC3
Authors:Wong, C, Drennan, C.L.
Deposit date:2009-03-08
Release date:2009-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of an open active site conformation of nonheme iron halogenase CytC3
J.Am.Chem.Soc., 131, 2009
2HZV
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BU of 2hzv by Molmil
NikR-operator DNA complex
Descriptor: 5'-D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*AP*TP*AP*CP*TP*TP*AP*AP*AP*AP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3', 5'-D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*TP*TP*TP*TP*AP*AP*GP*TP*AP*TP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3', NICKEL (II) ION, ...
Authors:Schreiter, E.R, Drennan, C.L.
Deposit date:2006-08-09
Release date:2006-08-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:NikR-operator complex structure and the mechanism of repressor activation by metal ions.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2HZA
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BU of 2hza by Molmil
Nickel-bound full-length Escherichia coli NikR
Descriptor: 3-CYCLOHEXYLPROPYL 4-O-ALPHA-D-GLUCOPYRANOSYL-BETA-D-GLUCOPYRANOSIDE, NICKEL (II) ION, Nickel-responsive regulator
Authors:Schreiter, E.R, Drennan, C.L.
Deposit date:2006-08-08
Release date:2006-08-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NikR-operator complex structure and the mechanism of repressor activation by metal ions.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6VXE
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BU of 6vxe by Molmil
Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile with substrate trans-4-hydroxy-L-proline bound
Descriptor: 4-HYDROXYPROLINE, Trans-4-hydroxy-L-proline dehydratase
Authors:Backman, L.R.F, Drennan, C.L.
Deposit date:2020-02-21
Release date:2020-04-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.464 Å)
Cite:Molecular basis for catabolism of the abundant metabolitetrans-4-hydroxy-L-proline by a microbial glycyl radical enzyme.
Elife, 9, 2020
4TVY
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BU of 4tvy by Molmil
Apo resorufin ligase
Descriptor: 5-(3,7-dihydroxy-10H-phenoxazin-2-yl)pentanamide, Lipoate-protein ligase A
Authors:Goldman, P.J, Drennan, C.L.
Deposit date:2014-06-28
Release date:2014-10-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Computational design of a red fluorophore ligase for site-specific protein labeling in living cells.
Proc.Natl.Acad.Sci.USA, 111, 2014
6XN6
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BU of 6xn6 by Molmil
ScoE with the CABA substrate bound and His299 and Arg157 flipped out
Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Jonnalagadda, R, Drennan, C.L.
Deposit date:2020-07-02
Release date:2021-01-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase.
J.Biol.Chem., 296, 2021

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數據於2024-07-17公開中

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