Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 572 件

3ZDT
DownloadVisualize
BU of 3zdt by Molmil
Crystal structure of basic patch mutant FAK FERM domain FAK31- 405 K216A, K218A, R221A, K222A
分子名称: FOCAL ADHESION KINASE 1
著者Goni, G.M, Epifano, C, Boskovic, J, Camacho-Artacho, M, Zhou, J, Martin, M.T, Eck, M.J, Kremer, L, Graeter, F, Gervasio, F.L, Perez-Moreno, M, Lietha, D.
登録日2012-11-30
公開日2012-12-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Phosphatidylinositol 4,5-Bisphosphate Triggers Activation of Focal Adhesion Kinase by Inducing Clustering and Conformational Changes.
Proc.Natl.Acad.Sci.USA, 111, 2014
6GL5
DownloadVisualize
BU of 6gl5 by Molmil
Crystal Structure of dimethylated RSL - sulfonatocalix[4]arene complex
分子名称: 1,2-ETHANEDIOL, 25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid, DI(HYDROXYETHYL)ETHER, ...
著者Guagnini, F, Rennie, M.L, Crowley, P.B.
登録日2018-05-23
公開日2019-06-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Protein Crystallization via Sulfonatocalix[4]arene Dimethylammonium Complexation
To Be Published
6EGY
DownloadVisualize
BU of 6egy by Molmil
Crystal structure of cytochrome c in complex with mono-PEGylated sulfonatocalix[4]arene
分子名称: Cytochrome c iso-1, HEME C, SULFATE ION, ...
著者Mummidivarapu, V.V.S, Rennie, M.L, Crowley, P.B.
登録日2017-09-12
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Noncovalent PEGylation via Sulfonatocalix[4]arene-A Crystallographic Proof.
Bioconjug.Chem., 29, 2018
4B5Q
DownloadVisualize
BU of 4b5q by Molmil
The lytic polysaccharide monooxygenase GH61D structure from the basidiomycota fungus Phanerochaete chrysosporium
分子名称: COPPER (II) ION, GLYCEROL, GLYCOSIDE HYDROLASE FAMILY 61 PROTEIN D, ...
著者Wu, M, Beckham, G.T, Larsson, A.M, Ishida, T, Kim, S, Crowley, M.F, Payne, C.M, Horn, S.J, Westereng, B, Stahlberg, J, Eijsink, V.G.H, Sandgren, M.
登録日2012-08-07
公開日2013-04-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure and Computational Characterization of the Lytic Polysaccharide Monooxygenase Gh61D from the Basidiomycota Fungus Phanerochaete Chrysosporium
J.Biol.Chem., 288, 2013
7AY0
DownloadVisualize
BU of 7ay0 by Molmil
Crystal structure of truncated USP1-UAF1
分子名称: Ubiquitin carboxyl-terminal hydrolase 1, WD repeat-containing protein 48, ZINC ION
著者Arkinson, C, Rennie, M.L, Walden, H.
登録日2020-11-10
公開日2021-03-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis of FANCD2 deubiquitination by USP1-UAF1.
Nat.Struct.Mol.Biol., 28, 2021
6F7Y
DownloadVisualize
BU of 6f7y by Molmil
Crystal structure of dimethylated RSL, cucurbituril-free form
分子名称: Fucose-binding lectin protein, GLYCEROL
著者Guagnini, F, Rennie, M.L, Crowley, P.B.
登録日2017-12-12
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Cucurbit[7]uril-Dimethyllysine Recognition in a Model Protein.
Angew. Chem. Int. Ed. Engl., 57, 2018
6F7X
DownloadVisualize
BU of 6f7x by Molmil
Crystal structure of dimethylated RSL - cucurbit[7]uril complex, F432 form
分子名称: Fucose-binding lectin protein, GLYCEROL, cucurbit[7]uril, ...
著者Guagnini, F, Rennie, M.L, Crowley, P.B.
登録日2017-12-12
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Cucurbit[7]uril-Dimethyllysine Recognition in a Model Protein.
Angew. Chem. Int. Ed. Engl., 57, 2018
8Q30
DownloadVisualize
BU of 8q30 by Molmil
Sulfolobus acidocaldarius AAP filament.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-deoxy-6-sulfo-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Isupov, M.N, Gaines, M, Daum, B, McLaren, M.
登録日2023-08-03
公開日2024-03-06
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献CryoEM reveals the structure of an archaeal pilus involved in twitching motility.
Nat Commun, 15, 2024
6F7W
DownloadVisualize
BU of 6f7w by Molmil
Crystal structure of dimethylated RSL - cucurbit[7]uril complex, C2221 Form
分子名称: Fucose-binding lectin protein, GLYCEROL, SODIUM ION, ...
著者Guagnini, F, Rennie, M.L, Crowley, P.B.
登録日2017-12-12
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Cucurbit[7]uril-Dimethyllysine Recognition in a Model Protein.
Angew. Chem. Int. Ed. Engl., 57, 2018
8QOX
DownloadVisualize
BU of 8qox by Molmil
Two-component assembly of SlaA and SlaB S-layer proteins of Sulfolobus acidocaldarius
分子名称: Conserved membrane protein, S-layer protein A
著者Gambelli, L, McLaren, M, Isupov, M, Conners, R, Daum, B.
登録日2023-09-29
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (11.2 Å)
主引用文献Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
8QP0
DownloadVisualize
BU of 8qp0 by Molmil
A hexamer pore in the S-layer of Sulfolobus acidocaldarius formed by SlaA protein
分子名称: S-layer protein A
著者Gambelli, L, McLaren, M, Isupov, M, Conners, R, Daum, B.
登録日2023-09-29
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (11.2 Å)
主引用文献Structure of the two-component S-layer of the archaeon Sulfolobus acidocaldarius.
Elife, 13, 2024
6F37
DownloadVisualize
BU of 6f37 by Molmil
Fusion protein of RSL and trimeric coiled coil
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Nano3,Fucose-binding lectin protein, beta-D-mannopyranose
著者Wronska, M.A, Rennie, M.L, Crowley, P.B.
登録日2017-11-28
公開日2018-12-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Fusion protein of RSL and trimeric coiled coil
To Be Published
6HVO
DownloadVisualize
BU of 6hvo by Molmil
Crystal structure of human PCNA in complex with three peptides of p12 subunit of human polymerase delta
分子名称: DNA polymerase delta subunit 4, Proliferating cell nuclear antigen, SULFATE ION
著者Gonzalez-Magana, A, Romano-Moreno, M, Rojas, A.L, Blanco, F.J, De Biasio, A.
登録日2018-10-11
公開日2019-01-23
最終更新日2019-03-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The p12 subunit of human polymerase delta uses an atypical PIP box for molecular recognition of proliferating cell nuclear antigen (PCNA).
J.Biol.Chem., 294, 2019
5AAR
DownloadVisualize
BU of 5aar by Molmil
Structure of the ankyrin domain of an Arabidopsis Thaliana potassium channel
分子名称: MAGNESIUM ION, POTASSIUM CHANNEL AKT1
著者Chaves-Sanjuan, A, Sanchez-Barrena, M.J, Albert, A.
登録日2015-07-28
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Recognition and activation of the plant AKT1 potassium channel by the kinase CIPK23.
Plant Physiol., 2020
5AAN
DownloadVisualize
BU of 5aan by Molmil
Crystal structure of Drosophila NCS-1 bound to penothiazine FD44
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, CALCIUM ION, CG5907-PA, ...
著者Chaves-Sanjuan, A, Infantes, L, Sanchez-Barrena, M.J.
登録日2015-07-27
公開日2017-01-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Interference of the complex between NCS-1 and Ric8a with phenothiazines regulates synaptic function and is an approach for fragile X syndrome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4JIX
DownloadVisualize
BU of 4jix by Molmil
Crystal structure of the metallopeptidase zymogen of Methanocaldococcus jannaschii jannalysin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
著者Lopez-Pelegrin, M, Cerda-Costa, N, Martinez-Jimenez, F, Cintas-Pedrola, A, Canals, A, Peinado, J.R, Marti-Renom, M.A, Lopez-Otin, C, Arolas, J.L, Gomis-Ruth, F.X.
登録日2013-03-07
公開日2013-06-12
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A novel family of soluble minimal scaffolds provides structural insight into the catalytic domains of integral membrane metallopeptidases
J.Biol.Chem., 288, 2013
4CZU
DownloadVisualize
BU of 4czu by Molmil
Crystal structure of the kinase domain of CIPK23 T190D mutant
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 23, SULFATE ION
著者Chaves-Sanjuan, A, Sanchez-Barrena, M.J, Albert, A.
登録日2014-04-22
公開日2014-10-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis of the Regulatory Mechanism of the Plant Cipk Family of Protein Kinases Controlling Ion Homeostasis and Abiotic Stress
Proc.Natl.Acad.Sci.USA, 111, 2014
4AU1
DownloadVisualize
BU of 4au1 by Molmil
Crystal Structure of CobH (precorrin-8x methyl mutase) complexed with C5 desmethyl-HBA
分子名称: DESMETHYL-HBA, PRECORRIN-8X METHYLMUTASE, SULFATE ION
著者Deery, E, Lawrence, A.D, Schroeder, S, Taylor, S.L, Seyedarabi, A, Vevodova, J, Wilson, K.S, Brown, D, Geeves, M.A, Howard, M.J, Pickersgill, R.W, Warren, M.J.
登録日2012-05-11
公開日2012-09-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献An Enzyme-Trap Approach Allows Isolation of Intermediates in Cobalamin Biosynthesis
Nat.Chem.Biol., 8, 2012
4CZT
DownloadVisualize
BU of 4czt by Molmil
Crystal structure of the kinase domain of CIPK23
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 23, SULFATE ION
著者Chaves-Sanjuan, A, Sanchez-Barrena, M.J, Albert, A.
登録日2014-04-22
公開日2014-10-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of the Regulatory Mechanism of the Plant Cipk Family of Protein Kinases Controlling Ion Homeostasis and Abiotic Stress
Proc.Natl.Acad.Sci.USA, 111, 2014
8P60
DownloadVisualize
BU of 8p60 by Molmil
Spraguea lophii ribosome dimer
分子名称: 40S Ribosomal protein S19, 40S ribosomal protein S0, 40S ribosomal protein S1, ...
著者Gil Diez, P, McLaren, M, Isupov, M.N, Daum, B, Conners, R, Williams, B.
登録日2023-05-24
公開日2023-06-21
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (14.3 Å)
主引用文献CryoEM reveals that ribosomes in microsporidian spores are locked in a dimeric hibernating state.
Nat Microbiol, 8, 2023
8P5D
DownloadVisualize
BU of 8p5d by Molmil
Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averaging
分子名称: 40S Ribosomal protein S19, 40S ribosomal protein S0, 40S ribosomal protein S10, ...
著者Gil Diez, P, McLaren, M, Isupov, M.N, Daum, B, Conners, R, Williams, B.
登録日2023-05-23
公開日2023-06-21
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (10.8 Å)
主引用文献CryoEM reveals that ribosomes in microsporidian spores are locked in a dimeric hibernating state.
Nat Microbiol, 8, 2023
6RGI
DownloadVisualize
BU of 6rgi by Molmil
Partially unfolded cytochrome c in complex with sulfonatocalix[6]arene
分子名称: Cytochrome c iso-1, HEME C, IMIDAZOLE, ...
著者Engilberge, S, Rennie, M.L, Crowley, P.B.
登録日2019-04-16
公開日2019-07-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Calixarene capture of partially unfolded cytochrome c.
Febs Lett., 593, 2019
5OT4
DownloadVisualize
BU of 5ot4 by Molmil
Structure of the Legionella pneumophila effector RidL (1-866)
分子名称: GLYCEROL, Interaptin
著者Romano-Moreno, M, Rojas, A.L, Lucas, M, Isupov, M.N, Hierro, A.
登録日2017-08-20
公開日2017-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular mechanism for the subversion of the retromer coat by the Legionella effector RidL.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5OSH
DownloadVisualize
BU of 5osh by Molmil
Structure of retromer VPS29-VPS35C subunits complexed with RidL N-terminal domain (1-236)
分子名称: Interaptin, Vacuolar protein sorting-associated protein 29, Vacuolar protein sorting-associated protein 35
著者Romano-Moreno, M, Rojas, A.L, Lucas, M, Isupov, M.N, Hierro, A.
登録日2017-08-17
公開日2017-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Molecular mechanism for the subversion of the retromer coat by the Legionella effector RidL.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8PDR
DownloadVisualize
BU of 8pdr by Molmil
Rigid body fit of assembled HMPV N-RNA spiral bound to the C-terminal region of P
分子名称: Nucleoprotein, Phosphoprotein, RNA
著者Whitehead, J.D, Decool, H, Leyrat, C, Carrique, L, Fix, J, Eleouet, J.F, Galloux, M, Renner, M.
登録日2023-06-12
公開日2023-12-06
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of the N-RNA/P interface indicates mode of L/P recruitment to the nucleocapsid of human metapneumovirus.
Nat Commun, 14, 2023

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon