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PDB: 42 results

7ELR
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BU of 7elr by Molmil
Crystal structure of xanthine riboswitch with xanthine
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NMT1 (46-MER), ...
Authors:Xu, X.C, Ren, A.M.
Deposit date:2021-04-12
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021
7ELS
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BU of 7els by Molmil
Crystal structure of xanthine riboswitch with 8-azaxanthine
Descriptor: 8-AZAXANTHINE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, X.C, Ren, A.M.
Deposit date:2021-04-12
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021
7ELQ
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BU of 7elq by Molmil
Crystal structure of xanthine riboswitch with xanthine, manganese saok
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Xu, X.C, Ren, A.M.
Deposit date:2021-04-12
Release date:2021-06-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021
7ELP
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BU of 7elp by Molmil
Crystal structure of xanthine riboswitch with xanthine, iridium hexammine soak
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, IRIDIUM ION, MAGNESIUM ION, ...
Authors:Xu, X.C, Ren, A.M.
Deposit date:2021-04-12
Release date:2021-06-30
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Insights into xanthine riboswitch structure and metal ion-mediated ligand recognition.
Nucleic Acids Res., 49, 2021
7D7V
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BU of 7d7v by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+) and U1A protein
Descriptor: 17delU1A (58-MER), GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chen, H, Ren, A.M.
Deposit date:2020-10-06
Release date:2020-11-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
7D7Z
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BU of 7d7z by Molmil
Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+), soaked in Mn2+
Descriptor: 18GAAA(52-MER), GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chen, H, Ren, A.M.
Deposit date:2020-10-06
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
8GXB
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BU of 8gxb by Molmil
Crystal structure of NAD+ -II riboswitch in complex with NAD+
Descriptor: MAGNESIUM ION, NAD+ II riboswitch, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Xu, X.C, Ren, A.M.
Deposit date:2022-09-19
Release date:2023-01-18
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure-based investigations of the NAD+-II riboswitch.
Nucleic Acids Res., 51, 2023
8GXC
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BU of 8gxc by Molmil
Crystal structure of NAD+ -II riboswitch in complex with NMN
Descriptor: 61-mer RNA, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, X.C, Ren, A.M.
Deposit date:2022-09-19
Release date:2023-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based investigations of the NAD+-II riboswitch.
Nucleic Acids Res., 51, 2023
8HZM
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BU of 8hzm by Molmil
A new fluorescent RNA aptamer bound with N, manganese soak
Descriptor: (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZF
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BU of 8hzf by Molmil
A new fluorescent RNA aptamer bound with N565
Descriptor: (5~{Z})-5-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-2-[(~{E})-2-(4-hydroxyphenyl)ethenyl]-3-methyl-imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZK
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BU of 8hzk by Molmil
A new fluorescent RNA aptamer bound with N, iridium hexammine soak
Descriptor: (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, DI(HYDROXYETHYL)ETHER, IRIDIUM HEXAMMINE ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZL
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BU of 8hzl by Molmil
A new fluorescent RNA aptamer_III bound with N
Descriptor: (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, MAGNESIUM ION, RNA (84-MER)
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZJ
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BU of 8hzj by Molmil
A new fluorescent RNA aptamer bound with N571
Descriptor: (5~{Z})-5-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZE
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BU of 8hze by Molmil
A new fluorescent RNA aptamer bound with N
Descriptor: (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Huang, K.Y, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
8HZD
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BU of 8hzd by Molmil
A new fluorescent RNA aptamer bound with N618
Descriptor: 4-[(~{E})-2-[(4~{Z})-4-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-1-methyl-5-oxidanylidene-imidazol-2-yl]ethenyl]benzenecarbonitrile, MAGNESIUM ION, RNA (36-MER)
Authors:Song, Q.Q, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 2024
1DUC
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BU of 1duc by Molmil
EIAV DUTPASE DUDP/STRONTIUM COMPLEX
Descriptor: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, DEOXYURIDINE-5'-DIPHOSPHATE, STRONTIUM ION
Authors:Dauter, Z, Persson, R, Rosengren, A.M, Nyman, P.O, Wilson, K.S, Cedergren-Zeppezauer, E.S.
Deposit date:1997-11-29
Release date:1998-06-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of dUTPase from equine infectious anaemia virus; active site metal binding in a substrate analogue complex.
J.Mol.Biol., 285, 1999
1DUN
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BU of 1dun by Molmil
EIAV DUTPASE NATIVE
Descriptor: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
Authors:Dauter, Z, Persson, R, Rosengren, A.M, Nyman, P.O, Wilson, K.S, Cedergren-Zeppezauer, E.S.
Deposit date:1997-11-27
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of dUTPase from equine infectious anaemia virus; active site metal binding in a substrate analogue complex.
J.Mol.Biol., 285, 1999
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