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PDB: 57 results

3ZCG
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BU of 3zcg by Molmil
Ascorbate peroxidase W41A-H42C mutant
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ASCORBATE PEROXIDASE, POTASSIUM ION, ...
Authors:Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2012-11-20
Release date:2012-12-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.491 Å)
Cite:Probing the Conformational Mobility of the Active Site of a Heme Peroxidase.
Dalton Trans, 42, 2013
2VO2
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BU of 2vo2 by Molmil
Crystal structure of soybean ascorbate peroxidase mutant W41A subjected to low dose X-rays
Descriptor: ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
Authors:Metcalfe, C.L, Badyal, S.K, Raven, E.L, Moody, P.C.E.
Deposit date:2008-02-08
Release date:2008-04-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Iron Oxidation State Modulates Active Site Structure in a Heme Peroxidase.
Biochemistry, 47, 2008
2VNZ
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BU of 2vnz by Molmil
Crystal structure of dithinonite reduced soybean ascorbate peroxidase mutant W41A.
Descriptor: ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION
Authors:Metcalfe, C.L, Badyal, S.K, Raven, E.L, Moody, P.C.E.
Deposit date:2008-02-08
Release date:2008-04-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Iron Oxidation State Modulates Active Site Structure in a Heme Peroxidase.
Biochemistry, 47, 2008
7BI1
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XFEL crystal structure of soybean ascorbate peroxidase compound II
Descriptor: Ascorbate peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kwon, H, Tosha, T, Sugimoto, H, Raven, E.L, Moody, P.C.E.
Deposit date:2021-01-12
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:XFEL Crystal Structures of Peroxidase Compound II.
Angew.Chem.Int.Ed.Engl., 60, 2021
7BIU
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BU of 7biu by Molmil
XFEL crystal structure of cytochrome c peroxidase compound II
Descriptor: Cytochrome c peroxidase, mitochondrial, HEME C
Authors:Kwon, H, Tosha, T, Sugimoto, H, Raven, E.L, Moody, P.C.E.
Deposit date:2021-01-13
Release date:2021-04-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:XFEL Crystal Structures of Peroxidase Compound II.
Angew.Chem.Int.Ed.Engl., 60, 2021
1V0H
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BU of 1v0h by Molmil
ASCOBATE PEROXIDASE FROM SOYBEAN CYTOSOL IN COMPLEX WITH SALICYLHYDROXAMIC ACID
Descriptor: ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, SALICYLHYDROXAMIC ACID, ...
Authors:Sharp, K.H, Raven, E.L, Moody, P.C.E.
Deposit date:2004-03-29
Release date:2004-06-23
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Crystal Structure of the Ascorbate Peroxidase-Salicylhydroxamic Acid Complex
Biochemistry, 43, 2004
6TAE
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BU of 6tae by Molmil
Neutron structure of ferric ascorbate peroxidase
Descriptor: Ascorbate peroxidase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Kwon, H, Basran, J, Devos, J.M, Schrader, T.E, Ostermann, A, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
Deposit date:2019-10-29
Release date:2020-03-18
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
Cite:Visualizing the protons in a metalloenzyme electron proton transfer pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
6QPJ
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BU of 6qpj by Molmil
Human CLOCK PAS-A domain
Descriptor: Circadian locomoter output cycles protein kaput
Authors:Kwon, H, Freeman, S.L, Moody, P.C.E, Raven, E.L, Basran, J.
Deposit date:2019-02-14
Release date:2019-09-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.315 Å)
Cite:Heme binding to human CLOCK affects interactions with the E-box.
Proc.Natl.Acad.Sci.USA, 116, 2019
7P46
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BU of 7p46 by Molmil
Crystal Structure of Xanthomonas campestris Tryptophan 2,3-dioxygenase (TDO)
Descriptor: (2S)-2-amino-4-(2-aminophenyl)-4-oxobutanoic acid, CYANIDE ION, GLYCEROL, ...
Authors:Kwon, H, Basran, J, Booth, E.S, Campbell, L.P, Thackray, S.J, Moody, P.C.E, Mowat, C.G, Raven, E.L.
Deposit date:2021-07-09
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Binding of l-kynurenine to X. campestris tryptophan 2,3-dioxygenase.
J.Inorg.Biochem., 225, 2021
7OPT
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BU of 7opt by Molmil
Crystal structure of Trypanosoma cruzi peroxidase
Descriptor: Ascorbate peroxidase, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Freeman, S.L, Kwon, H, Skafar, V, Fielding, A.J, Martinez, A, Piacenza, L, Radi, R, Raven, E.L.
Deposit date:2021-06-01
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate.
J.Biol.Chem., 298, 2022
7OQR
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Crystal structure of Trypanosoma cruzi peroxidase
Descriptor: ACETATE ION, Ascorbate peroxidase, GLYCEROL, ...
Authors:Freeman, S.L, Kwon, H, Skafar, V, Fielding, A.J, Martinez, A, Piacenza, L, Radi, R, Raven, E.L.
Deposit date:2021-06-04
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate.
J.Biol.Chem., 298, 2022
6XV4
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Neutron structure of ferric ascorbate peroxidase-ascorbate complex
Descriptor: ASCORBIC ACID, Ascorbate peroxidase, POTASSIUM ION, ...
Authors:Kwon, H, Basran, J, Devos, J.M, Schrader, T.E, Ostermann, A, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
Deposit date:2020-01-21
Release date:2020-03-18
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
Cite:Visualizing the protons in a metalloenzyme electron proton transfer pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
5JPR
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BU of 5jpr by Molmil
Neutron Structure of Compound II of Ascorbate Peroxidase
Descriptor: Ascorbate peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kwon, H, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
Deposit date:2016-05-04
Release date:2016-12-21
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.806 Å), X-RAY DIFFRACTION
Cite:Direct visualization of a Fe(IV)-OH intermediate in a heme enzyme.
Nat Commun, 7, 2016
5JQR
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The Structure of Ascorbate Peroxidase Compound II formed by reaction with m-CPBA
Descriptor: Ascorbate peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kwon, H, Raven, E.L, Moody, P.C.E.
Deposit date:2016-05-05
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Direct visualization of a Fe(IV)-OH intermediate in a heme enzyme.
Nat Commun, 7, 2016
5AOG
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BU of 5aog by Molmil
Structure of Sorghum peroxidase
Descriptor: 1H-INDOL-3-YLACETIC ACID, CALCIUM ION, CATIONIC PEROXIDASE SPC4, ...
Authors:Kwon, H, Nnamchi, C.I, Parkin, G, Efimov, I, Agirre, J, Basran, J, Raven, E.L, Moody, P.C.E.
Deposit date:2015-09-10
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Structural and Spectroscopic Characterisation of a Heme Peroxidase from Sorghum.
J.Biol.Inorg.Chem., 21, 2016
1NZ2
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BU of 1nz2 by Molmil
K45E Variant of Horse Heart Myoglobin
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Hunter, C.L, Maurus, R, Mauk, M.R, Lee, H, Raven, E.L, Tong, H, Nguyen, N, Smith, M, Brayer, G.D, Mauk, A.G.
Deposit date:2003-02-15
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Introduction and characterization of a functionally linked metal ion binding site at the exposed heme edge of myoglobin
Proc.Natl.Acad.Sci.USA, 100, 2003
1NZ5
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BU of 1nz5 by Molmil
The Horse heart myoglobin variant K45E/K63E complexed with Manganese
Descriptor: MANGANESE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hunter, C.L, Maurus, R, Mauk, M.R, Lee, H, Raven, E.L, Tong, H, Nguyen, N, Smith, S, Brayer, G.D, Mauk, A.G.
Deposit date:2003-02-15
Release date:2003-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Introduction and characterization of a functionally linked metal ion binding site at the exposed heme edge of myoglobin
Proc.Natl.Acad.Sci.USA, 100, 2003
1NZ3
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BU of 1nz3 by Molmil
K45E-K63E Variant of Horse Heart Myoglobin
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hunter, C.L, Maurus, R, Mauk, M.R, Lee, H, Raven, E.L, Tong, H, Nguyen, N, Smith, S, Brayer, G.D, Mauk, A.G.
Deposit date:2003-02-15
Release date:2003-04-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Introduction and characterization of a functionally linked metal ion binding site at the exposed heme edge of myoglobin
Proc.Natl.Acad.Sci.USA, 100, 2003
3R99
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BU of 3r99 by Molmil
Joint Neutron and X-ray structure of Cytochrome c peroxidase
Descriptor: Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Blakeley, M.P, Fisher, S.J, Gumiero, A, Moody, P.C.E, Raven, E.L.
Deposit date:2011-03-25
Release date:2012-04-04
Last modified:2024-03-20
Method:NEUTRON DIFFRACTION (2.4 Å), X-RAY DIFFRACTION
Cite:Hydrogen bonds in heme peroxidases: a combined X-ray and neutron study of cytochrome c peroxidase
To be Published
3R98
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Joint Neutron and X-ray structure of Cytochrome c peroxidase
Descriptor: Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Blakeley, M.P, Fisher, S.J, Gumiero, A, Moody, P.C.E, Raven, E.L.
Deposit date:2011-03-25
Release date:2012-04-04
Last modified:2024-03-20
Method:NEUTRON DIFFRACTION (2.4 Å), X-RAY DIFFRACTION
Cite:Hydrogen bonds in heme peroxidases: a combined X-ray and neutron study of cytochrome c peroxidase
To be Published
2VCF
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BU of 2vcf by Molmil
Structure of isoniazid (INH) bound to cytosolic soybean ascorbate peroxidase
Descriptor: 4-(DIAZENYLCARBONYL)PYRIDINE, ASCORBATE PEROXIDASE FROM SOYBEAN CYTOSOL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Metcalfe, C.L, Macdonald, I.K, Brown, K.A, Raven, E.L, Moody, P.C.E.
Deposit date:2007-09-21
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Tuberculosis Prodrug Isoniazid Bound to Activating Peroxidases.
J.Biol.Chem., 283, 2008
2V23
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BU of 2v23 by Molmil
Structure of cytochrome c peroxidase mutant N184R Y36A
Descriptor: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Metcalfe, C.L, Macdonald, I.K, Brown, K.A, Raven, E.L, Moody, P.C.E.
Deposit date:2007-05-31
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Tuberculosis Prodrug Isoniazid Bound to Activating Peroxidases.
J.Biol.Chem., 283, 2008
2VCS
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BU of 2vcs by Molmil
Structure of isoniazid (INH) bound to cytosolic soybean ascorbate peroxidase mutant H42A
Descriptor: 4-(DIAZENYLCARBONYL)PYRIDINE, ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Metcalfe, C.L, Macdonald, I.K, Brown, K.A, Raven, E.L, Moody, P.C.E.
Deposit date:2007-09-26
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The Tuberculosis Prodrug Isoniazid Bound to Activating Peroxidases.
J.Biol.Chem., 283, 2008
2V2E
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BU of 2v2e by Molmil
Structure of isoniazid (INH) bound to cytochrome c peroxidase mutant N184R Y36A
Descriptor: 4-(DIAZENYLCARBONYL)PYRIDINE, CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Metcalfe, C.L, Macdonald, I.K, Brown, K.A, Raven, E.L, Moody, P.C.E.
Deposit date:2007-06-05
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:The Tuberculosis Prodrug Isoniazid Bound to Activating Peroxidases.
J.Biol.Chem., 283, 2008
2VCN
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BU of 2vcn by Molmil
Structure of isoniazid (INH) bound to cytosolic soybean ascorbate peroxidase mutant W41A
Descriptor: 4-(DIAZENYLCARBONYL)PYRIDINE, ASCORBATE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Metcalfe, C.L, Macdonald, I.K, Brown, K.A, Raven, E.L, Moody, P.C.E.
Deposit date:2007-09-25
Release date:2007-12-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The Tuberculosis Prodrug Isoniazid Bound to Activating Peroxidases.
J.Biol.Chem., 283, 2008

 

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