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PDB: 12 results

9IX8
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Crystallization and structural characterization of phosphopentomutase from the hyperthermophilic archaeon Thermococcus kodakarensis
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, GLYCEROL, Phosphopentomutase
Authors:Naz, Z, Lubkowski, T.J, Saleem, M, Rahman, M, Wlodawer, A, Rashid, N.
Deposit date:2024-07-26
Release date:2024-12-18
Last modified:2025-01-01
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Biophysical Characterization of a Novel Phosphopentomutase from the Hyperthermophilic Archaeon Thermococcus kodakarensis .
Int J Mol Sci, 25, 2024
9DU5
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BU of 9du5 by Molmil
Cryo-EM structure of phosphoglucomutase from Thermococcus kodakarensis
Descriptor: Phosphoglucomutase/phosphomannomutase
Authors:Naz, Z, Rathore, I, Saleem, M, Rahman, M, Rashid, N, Wlodawer, A.
Deposit date:2024-10-02
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (2.45 Å)
Cite:A Bifunctional Phosphoglucomutase/Phosphomannomutase from Thermococcus kodakarensis : Biophysical Analysis and Cryo-EM Structure.
Biomolecules, 15, 2025
3AUK
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BU of 3auk by Molmil
Crystal structure of a lipase from Geobacillus sp. SBS-4S
Descriptor: CALCIUM ION, CHLORIDE ION, Lipase, ...
Authors:Angkawidjaja, C, Tayyab, M, Rashid, N, Kanaya, S.
Deposit date:2011-02-08
Release date:2012-02-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of a lipase from Geobacillus sp. SBS-4S
TO BE PUBLISHED
2CVF
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BU of 2cvf by Molmil
Crystal structure of the RadB recombinase
Descriptor: DNA repair and recombination protein radB
Authors:Akiba, T, Ishii, N, Rashid, N, Morikawa, M, Imanaka, T, Harata, K.
Deposit date:2005-06-03
Release date:2005-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of RadB recombinase from a hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1: an implication for the formation of a near-7-fold helical assembly
Nucleic Acids Res., 33, 2005
2CVH
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BU of 2cvh by Molmil
Crystal structure of the RadB recombinase
Descriptor: DNA repair and recombination protein radB
Authors:Akiba, T, Ishii, N, Rashid, N, Morikawa, M, Imanaka, T, Harata, K.
Deposit date:2005-06-03
Release date:2005-08-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of RadB recombinase from a hyperthermophilic archaeon, Thermococcus kodakaraensis KOD1: an implication for the formation of a near-7-fold helical assembly
Nucleic Acids Res., 33, 2005
5OT1
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The type III pullulan hydrolase from Thermococcus kodakarensis
Descriptor: CALCIUM ION, Pullulanase type II, GH13 family
Authors:Guo, J, Coker, A.R, Wood, S.P, Cooper, J.B, Keegan, R, Ahmad, N, Muhammad, M.A, Rashid, N, Akhtar, M.
Deposit date:2017-08-18
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure and function of the type III pullulan hydrolase from Thermococcus kodakarensis.
Acta Crystallogr D Struct Biol, 74, 2018
5LHE
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BU of 5lhe by Molmil
Phosphoribosyl anthranilate isomerase from Thermococcus kodakaraensis
Descriptor: N-(5'-phosphoribosyl)anthranilate isomerase, SODIUM ION
Authors:Perveen, S, Rashid, N, Papageorgiou, A.C.
Deposit date:2016-07-11
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a phosphoribosyl anthranilate isomerase from the hyperthermophilic archaeon Thermococcus kodakaraensis.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5LHF
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Phosphoribosyl anthranilate isomerase from Thermococcus kodakaraensis
Descriptor: CHLORIDE ION, N-(5'-phosphoribosyl)anthranilate isomerase, SODIUM ION
Authors:Perveen, S, Rashid, N, Papageorgiou, A.C.
Deposit date:2016-07-11
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a phosphoribosyl anthranilate isomerase from the hyperthermophilic archaeon Thermococcus kodakaraensis.
Acta Crystallogr F Struct Biol Commun, 72, 2016
5MDN
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Structure of the family B DNA polymerase from the hyperthermophilic archaeon Pyrobaculum calidifontis
Descriptor: DNA polymerase, MAGNESIUM ION
Authors:Guo, J, Zhang, W, Coker, A.R, Wood, S.P, Cooper, J.B, Rashid, N, Akhtar, M.
Deposit date:2016-11-12
Release date:2016-12-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the family B DNA polymerase from the hyperthermophilic archaeon Pyrobaculum calidifontis.
Acta Crystallogr D Struct Biol, 73, 2017
5OT0
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BU of 5ot0 by Molmil
The thermostable L-asparaginase from Thermococcus kodakarensis
Descriptor: 1,2-ETHANEDIOL, L-asparaginase, PHOSPHATE ION, ...
Authors:Guo, J, Coker, A.R, Wood, S.P, Cooper, J.B, Rashid, N, Chohan, S.M, Akhtar, M.
Deposit date:2017-08-18
Release date:2017-11-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure and function of the thermostable L-asparaginase from Thermococcus kodakarensis.
Acta Crystallogr D Struct Biol, 73, 2017
5NOE
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Anthranilate phosphoribosyltransferase from Thermococcus kodakaraensis
Descriptor: Anthranilate phosphoribosyltransferase
Authors:Perveen, S, Rashid, N, Papageorgiou, A.C.
Deposit date:2017-04-12
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Anthranilate phosphoribosyltransferase from the hyperthermophilic archaeon Thermococcus kodakarensis shows maximum activity with zinc and forms a unique dimeric structure.
FEBS Open Bio, 7, 2017
5NOF
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Anthranilate phosphoribosyltransferase from Thermococcus kodakaraensis
Descriptor: Anthranilate phosphoribosyltransferase, CHLORIDE ION, SODIUM ION, ...
Authors:Perveen, S, Rashid, N, Papageorgiou, A.C.
Deposit date:2017-04-12
Release date:2017-11-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Anthranilate phosphoribosyltransferase from the hyperthermophilic archaeon Thermococcus kodakarensis shows maximum activity with zinc and forms a unique dimeric structure.
FEBS Open Bio, 7, 2017

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