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PDB: 41 件
8HIU
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BU of 8hiu by Molmil
Crystal structure of O-carbamoyltransferase VtdB and the compound VtdB with carbamoyladenylate from Streptomyces sp. NO1W98
分子名称: Carbamoyltransferase, MAGNESIUM ION
著者Rao, D, Teng, Y.
登録日2022-11-22
公開日2024-01-24
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Crystal structure of O-carbamoyltransferase VtdB and the compound VtdB with carbamoyladenylate from Streptomyces sp. NO1W98
To Be Published
4QKQ
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BU of 4qkq by Molmil
RadA from Methanococcus Voltae in complex with copper phthalocyanine tetrasulfonate inhibitor
分子名称: Copper(II) tetrapyrrole, DNA repair and recombination protein RadA, NITRATE ION
著者Rao, D.E.C.S, Li, Y, He, Y, Luo, Y.
登録日2014-06-09
公開日2015-06-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of an archaeal Rad51 homolog in complex with a phthalocyanine tetrasulfonate inhibitor
To be Published
7BCW
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BU of 7bcw by Molmil
Structure of MsbA in Salipro with ADP vanadate
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ADENOSINE-5'-DIPHOSPHATE, ATP-dependent lipid A-core flippase, ...
著者Traore, D.A.K, Tidow, H.
登録日2020-12-21
公開日2022-01-12
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of MsbA in saposin-lipid nanoparticles (Salipro) provides insights into nucleotide coordination.
Febs J., 289, 2022
6O1Z
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BU of 6o1z by Molmil
Structure of pCW3 conjugation coupling protein TcpA hexagonal crystal form
分子名称: DNA translocase coupling protein
著者Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
登録日2019-02-22
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of pCW3 conjugation coupling protein TcpA
To be published
5VFY
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BU of 5vfy by Molmil
Structure of an accessory protein of the pCW3 relaxosome
分子名称: TcpK
著者Traore, D.A.K, Wisniewski, J.A, Flanigan, S.F, Conroy, P.J, Panjikar, S, Mok, Y.-F, Lao, C, Griffin, M.D.W, Adams, V, Rood, J.I, Whisstock, J.C.
登録日2017-04-10
公開日2018-04-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Crystal structure of TcpK in complex with oriT DNA of the antibiotic resistance plasmid pCW3.
Nat Commun, 9, 2018
5VFX
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BU of 5vfx by Molmil
Structure of an accessory protein of the pCW3 relaxosome in complex with the origin of transfer (oriT) DNA
分子名称: TcpK, oriT
著者Traore, D.A.K, Wisniewski, J.A, Flanigan, S.F, Conroy, P.J, Panjikar, S, Mok, Y.-F, Lao, C, Griffin, M.D.W, Adams, V, Rood, J.I, Whisstock, J.C.
登録日2017-04-10
公開日2018-04-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal structure of TcpK in complex with oriT DNA of the antibiotic resistance plasmid pCW3.
Nat Commun, 9, 2018
6O1W
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BU of 6o1w by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomer orthorhombic crystal form
分子名称: DNA translocase coupling protein, beta-D-glucopyranose
著者Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
登録日2019-02-22
公開日2020-02-26
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1Y
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BU of 6o1y by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomeric form with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA translocase coupling protein, beta-D-glucopyranose
著者Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
登録日2019-02-22
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of pCW3 conjugation coupling protein TcpA
To be published
6O1X
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BU of 6o1x by Molmil
Structure of pCW3 conjugation coupling protein TcpA monomer form with ATPgS
分子名称: DNA translocase coupling protein, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, beta-D-glucopyranose
著者Traore, D.A.K, Ahktar, N, Torres, V.T, Adams, V, Coulibaly, F, Panjikar, S, Caradoc-Davies, T.T, Rood, J.I, Whisstock, J.C.
登録日2019-02-22
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structure of pCW3 conjugation coupling protein TcpA
To be published
2FE3
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BU of 2fe3 by Molmil
The crystal structure of bacillus subtilis PerR-Zn reveals a novel Zn(Cys)4 Structural redox switch
分子名称: Peroxide operon regulator, ZINC ION
著者Traore, D.A.K.
登録日2005-12-15
公開日2006-12-19
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the apo-PerR-Zn protein from Bacillus subtilis.
Mol.Microbiol., 61, 2006
3F8N
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BU of 3f8n by Molmil
Crystal structure of PerR-Zn-Mn
分子名称: MANGANESE (II) ION, Peroxide operon regulator, ZINC ION
著者Traore, D.A.K, Ferrer, J.-L, Jacquamet, L, Duarte, V, Latour, J.-M.
登録日2008-11-13
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural characterization of the active form of PerR: insights into the metal-induced activation of PerR and Fur proteins for DNA binding
Mol.Microbiol., 73, 2009
3W56
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BU of 3w56 by Molmil
Structure of a C2 domain
分子名称: C2 domain protein
著者Traore, D.A.K, Whisstock, J.C.
登録日2013-01-24
公開日2013-10-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Defining the interaction of perforin with calcium and the phospholipid membrane.
Biochem.J., 456, 2013
3VKE
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BU of 3vke by Molmil
Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
分子名称: DNA (5'-D(P*AP*CP*CP*CP*CP*A)-3'), Poly(rC)-binding protein 1
著者Traore, D.A.K, Wilce, M.C.J, Wilce, J.A.
登録日2011-11-15
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
Nucleic Acids Res., 40, 2012
2RGV
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BU of 2rgv by Molmil
The crystal structure of PerR-Ox highlights 2-oxo-Histidine formation
分子名称: Peroxide operon regulator, ZINC ION
著者Traore, D.A.K.
登録日2007-10-05
公開日2008-10-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural and functional characterization of 2-oxo-histidine in oxidized PerR protein.
Nat.Chem.Biol., 5, 2009
3W57
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BU of 3w57 by Molmil
Structure of a C2 domain
分子名称: C2 domain protein, CALCIUM ION
著者Traore, D.A.K, Whisstock, J.C.
登録日2013-01-24
公開日2013-10-23
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.662 Å)
主引用文献Defining the interaction of perforin with calcium and the phospholipid membrane.
Biochem.J., 456, 2013
3MIW
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BU of 3miw by Molmil
Crystal Structure of Rotavirus NSP4
分子名称: 1,2-ETHANEDIOL, Non-structural glycoprotein 4
著者Chacko, A.R, Read, R.J, Dodson, E.J, Rao, D.C, Suguna, K.
登録日2010-04-12
公開日2011-05-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A new pentameric structure of rotavirus NSP4 revealed by molecular replacement.
Acta Crystallogr.,Sect.D, 68, 2012
3N3I
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BU of 3n3i by Molmil
Crystal Structure of G48V/C95F tethered HIV-1 Protease/Saquinavir complex
分子名称: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, Protease
著者Prashar, V, Bihani, S.C, Das, A, Rao, D.R, Hosur, M.V.
登録日2010-05-20
公開日2010-06-09
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Insights into the mechanism of drug resistance: X-ray structure analysis of G48V/C95F tethered HIV-1 protease dimer/saquinavir complex
Biochem.Biophys.Res.Commun., 396, 2010
6ACA
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BU of 6aca by Molmil
Crystal structure of Mycobacterium tuberculosis Mfd at 3.6 A resolution
分子名称: Mycobacterium tuberculosis Mfd
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-26
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
2AOQ
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BU of 2aoq by Molmil
Crystal structure of MutH-unmethylated DNA complex
分子名称: 5'-D(*GP*CP*AP*TP*GP*AP*TP*CP*AP*TP*GP*C)-3', CALCIUM ION, DNA mismatch repair protein mutH
著者Lee, J.Y, Chang, J, Joseph, N, Ghirlando, R, Rao, D.N, Yang, W.
登録日2005-08-13
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage.
Mol.Cell, 20, 2005
6AC6
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BU of 6ac6 by Molmil
Ab initio crystal structure of Selenomethionine labelled Mycobacterium smegmatis Mfd
分子名称: Mycobacterium smegmatis Mfd, SULFATE ION
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-25
公開日2019-08-28
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.989 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
6AC8
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BU of 6ac8 by Molmil
Crystal structure of Mycobacterium smegmatis Mfd at 2.75 A resolution
分子名称: Mycobacterium smegmatis Mfd, SULFATE ION
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-25
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
6ACX
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BU of 6acx by Molmil
Crystal structure of Mycobacterium smegmatis Mfd in complex with ADP + Pi at 3.5 A resolution.
分子名称: ADENOSINE-5'-DIPHOSPHATE, Mycobacterium smegmatis Mfd, PHOSPHATE ION, ...
著者Putta, S, Fox, G.C, Walsh, M.A, Rao, D.N, Nagaraja, V, Natesh, R.
登録日2018-07-27
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis for nucleotide-mediated remodelling mechanism of Mycobacterium Mfd
To Be Published
2AOR
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BU of 2aor by Molmil
Crystal structure of MutH-hemimethylated DNA complex
分子名称: 5'-D(*CP*AP*GP*GP*(6MA)P*TP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*AP*TP*CP*CP*TP*G)-3', CALCIUM ION, DNA mismatch repair protein mutH
著者Lee, J.Y, Chang, J, Joseph, N, Ghirlando, R, Rao, D.N, Yang, W.
登録日2005-08-13
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage.
Mol.Cell, 20, 2005
4DTF
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BU of 4dtf by Molmil
Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with AMP-PNP and Mg++
分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Durand, E, Audoly, G, Derrez, E, Spinelli, S, Ortiz-Lombardia, M, Cascales, E, Raoult, D, Cambillau, C.
登録日2012-02-21
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structure of a VgrG Vibrio cholerae toxin ACD domain in complex with AMP-PNP and Mg++
J.Biol.Chem., 2012
2OSE
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BU of 2ose by Molmil
Crystal Structure of the Mimivirus Cyclophilin
分子名称: CHLORIDE ION, Probable peptidyl-prolyl cis-trans isomerase
著者Eisenmesser, E.Z, Thai, V, Renesto, P, Raoult, D.
登録日2007-02-05
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural, biochemical, and in vivo characterization of the first virally encoded cyclophilin from the Mimivirus.
J.Mol.Biol., 378, 2008

 

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